Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0553200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22488914:22492254:-1 gene:Os12g0553200 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os12t0553200-01)
Sequence	ATGAACATCGCCACTGGGGCAATGAACACCCTCCTCCCCAAGCTTGGGGAGCTGCTGGTT GGCGAATACAAGCTGCAAAAGGGTGTCAAGGGAGAGATCGAAGAACTTGAGAAAGAGTTG AAAGGTATGACCGCAGCACTCCACAAGGTGGCTGAGACACCTGTGGATCAACTTGACCAG CAGGTCAAGATCTGGGCCAGCGAGGTGAGAGAGCTATCTTACGACATCGAGGATGCCATC GACACCTTCATGTTAAAGTGCAAGGGGCATGAACCTGCCACGAGCTTCAAGAAGGTCACC AATTTGTTCAACAAGTTCAAAACTAACCATCAGATCCACGGTGTCATCAAAGACATCATG GACCAGGTCAAGAAGGTCAGCGAGCGTCGTGACAGGTGCAGAGTCGATGACATCGCTGCC AGGCCAACTGTTGTGGATGTTGATTCTCGCCTAGAAGCTATGTACCGAAAGGCAACAAAA CTCATTGGCATTAGCAAGCCAAAAAATGAGCTAACTAAGCAACTCTTGGAATATGACGGC TCATCCAGCCAACAATCAAATATAATTTCTATTGTTGGATTCGGAGGCTTAGGAAAGACA ACTCTTGCCAATTCATTATTTCAGGAGCTTAAGGCAAAATTTGACAGCTATTGTTTTGTT TCGGTGTCCTTGAATCCTGATATAAACAAGATTCTCAAGAACATTCTTCTCCAACTTGAT GAGAAAATGTATTCCCACATAGATGAAACATGGGAAACGAAGCAGCTCATCGACAAAATT AGAGACTTCCTCAACAATAGAAGGTTCTTGTGCGTGATTGATGATGTATGGAAAAAATCA GCGTGGGATACTATCAAACTTGCTGTGCAAGATGCTAAACTTGGTAGCAAAATAATTGTA ACCACGCGAAACAAGGTCATTGCAGAACATGCAGGCGGTGGTGTTTATGAAATGAAACCC TTATCTGATGATGATTCCAGACAATTGTTCTGCAAACGAATATTTGACTCTAACGATGAC TGTCCTGCTGATTTGTGTGGTGTCACTGAGAAAATTTTGAAGAAATGTGGTGGTGTACCG CTAGCAATCATCACTACAGCATGCCTACTTGCTAGCAAACCAAGGAATTCAGAGGAATGG GACAAGGTCAATAAGTCTATCAGTTTGGGGCTTGAGAACAACCTTGATGTGGACAACATG CGGAAGATATTAAGCCTCAGTTACAGCGATCTACCTTTTCATTTGAAGACTTGCTTGTTG TCTCTAAGCAAATATACTGAGGATGAGCTAATTAGAAAATATGTTTTGATATGGAGTTGG TTAGCAGAGGGTTTTATTACAGATGAAACACGACCTGCAGGGACAAGCTTGCAGGAGATT GGCGAGAGCTACTTCAACGAGCTCATCAATCGAAGCTTGATCCAGCCAATGAGTGAGAAC ACTCTTTGGGATGAAGATGGTAAGGTGCATGCATGCAAAGTACATGACATGGTGCTTGAG CTAATAAATCAGCTGTCAGTAGAAGAAGATTTTGTTACAACGTATTTATCTGATGGTCAA CAAACAGGTAAACATACATGTACAGCACAAAAGAAGAAGATTCGCCGATTATCTCTCCAT AACAGCAATAAGTCCTATGCCTCGCCAGAAGCAAGAGAACAATTGTCCAAAGTAAGGTCG ATTACTATCTTCGGCAAGGTCGACTCGATACCACCCTTGTCGAGCTTTCATGTCCTGCGT GTGTTGCAGCTTGAGGACTGCAGTGGAATGGACAAGAACCATCTTAATCATCTCGATAAG CTACTCCTCCTAAGATTTCTGCGTCTAGGGCACTATGGTGCCACTGAGCTCCCTGAAAGC ATTGGGAAACTGGAATCTCTCGAAACCTTGGACATAAGAGGTGCACGTAAACCAAGTTCT TTTAAATCTCATAAGGTACTGTTTCCAATGTCTTTTGCCAAACTAAGGAAACTGTTGCGG CTATATGCTGGCAGAGTGAAGCTGGCACAAGGTCTGATGCTGGGGGATATGAAATCTTTA CAGGAGCTTGTAATAGAAGCTACCCGAAAGGTAATAAAAGAGATTGGCAATTTGACGGAG CTAAGGACTCTTAGGATCGTTTTCAGTAGTGAAAAAACATTTGAGTTAAAGGAATCCATT CAAACGTCTATACAAAGGTTCACCAATTTGCAAGACCTAGATTTGAGAAATAATAATAGT TTTGAAGAAATCATAGACATGCAACAGGTTCCTTCTGGTCTCCAAAGGTTGTTCATGCAC CATTCGTATATGAAAGCATTCCCATGTTGGATCAATTCGTCGATGCTCTCCCGCCTCACC ACCTTATCCATTTGGCTGTGTTTTGAATATCTCCAGTCTGACCACCTTGATCGCCTCGCT GAGCTTCCATCTCTTCGCTTTCTCAGGCTACAGTTAGCATTTGTTTCGGAACAACTATAG

Peptide Sequence

PEP ID	Os12t0553200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22488914:22492254:-1 gene:Os12g0553200 transcript:Os12t0553200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os12t0553200-01)
Sequence	MNIATGAMNTLLPKLGELLVGEYKLQKGVKGEIEELEKELKGMTAALHKVAETPVDQLDQ QVKIWASEVRELSYDIEDAIDTFMLKCKGHEPATSFKKVTNLFNKFKTNHQIHGVIKDIM DQVKKVSERRDRCRVDDIAARPTVVDVDSRLEAMYRKATKLIGISKPKNELTKQLLEYDG SSSQQSNIISIVGFGGLGKTTLANSLFQELKAKFDSYCFVSVSLNPDINKILKNILLQLD EKMYSHIDETWETKQLIDKIRDFLNNRRFLCVIDDVWKKSAWDTIKLAVQDAKLGSKIIV TTRNKVIAEHAGGGVYEMKPLSDDDSRQLFCKRIFDSNDDCPADLCGVTEKILKKCGGVP LAIITTACLLASKPRNSEEWDKVNKSISLGLENNLDVDNMRKILSLSYSDLPFHLKTCLL SLSKYTEDELIRKYVLIWSWLAEGFITDETRPAGTSLQEIGESYFNELINRSLIQPMSEN TLWDEDGKVHACKVHDMVLELINQLSVEEDFVTTYLSDGQQTGKHTCTAQKKKIRRLSLH NSNKSYASPEAREQLSKVRSITIFGKVDSIPPLSSFHVLRVLQLEDCSGMDKNHLNHLDK LLLLRFLRLGHYGATELPESIGKLESLETLDIRGARKPSSFKSHKVLFPMSFAKLRKLLR LYAGRVKLAQGLMLGDMKSLQELVIEATRKVIKEIGNLTELRTLRIVFSSEKTFELKESI QTSIQRFTNLQDLDLRNNNSFEEIIDMQQVPSGLQRLFMHHSYMKAFPCWINSSMLSRLT TLSIWLCFEYLQSDHLDRLAELPSLRFLRLQLAFVSEQL

Transcript Sequence

Transcript ID	Os12t0553200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22488914:22492254:-1 gene:Os12g0553200 gene_biotype:protein_coding transcript_biotype:protein_coding description:NB-ARC domain containing protein. (Os12t0553200-01)
Sequence	GGGGGCGGCGCGGCCAAGGGGCGGATCGGAGCGGAGCCAGCGGCGACGACGACCGCATCC ACTGTCCCGACCCTCCAATTCCGGCATTCAACATCAGATAGGCCAAGATGAACATCGCCA CTGGGGCAATGAACACCCTCCTCCCCAAGCTTGGGGAGCTGCTGGTTGGCGAATACAAGC TGCAAAAGGGTGTCAAGGGAGAGATCGAAGAACTTGAGAAAGAGTTGAAAGGTATGACCG CAGCACTCCACAAGGTGGCTGAGACACCTGTGGATCAACTTGACCAGCAGGTCAAGATCT GGGCCAGCGAGGTGAGAGAGCTATCTTACGACATCGAGGATGCCATCGACACCTTCATGT TAAAGTGCAAGGGGCATGAACCTGCCACGAGCTTCAAGAAGGTCACCAATTTGTTCAACA AGTTCAAAACTAACCATCAGATCCACGGTGTCATCAAAGACATCATGGACCAGGTCAAGA AGGTCAGCGAGCGTCGTGACAGGTGCAGAGTCGATGACATCGCTGCCAGGCCAACTGTTG TGGATGTTGATTCTCGCCTAGAAGCTATGTACCGAAAGGCAACAAAACTCATTGGCATTA GCAAGCCAAAAAATGAGCTAACTAAGCAACTCTTGGAATATGACGGCTCATCCAGCCAAC AATCAAATATAATTTCTATTGTTGGATTCGGAGGCTTAGGAAAGACAACTCTTGCCAATT CATTATTTCAGGAGCTTAAGGCAAAATTTGACAGCTATTGTTTTGTTTCGGTGTCCTTGA ATCCTGATATAAACAAGATTCTCAAGAACATTCTTCTCCAACTTGATGAGAAAATGTATT CCCACATAGATGAAACATGGGAAACGAAGCAGCTCATCGACAAAATTAGAGACTTCCTCA ACAATAGAAGGTTCTTGTGCGTGATTGATGATGTATGGAAAAAATCAGCGTGGGATACTA TCAAACTTGCTGTGCAAGATGCTAAACTTGGTAGCAAAATAATTGTAACCACGCGAAACA AGGTCATTGCAGAACATGCAGGCGGTGGTGTTTATGAAATGAAACCCTTATCTGATGATG ATTCCAGACAATTGTTCTGCAAACGAATATTTGACTCTAACGATGACTGTCCTGCTGATT TGTGTGGTGTCACTGAGAAAATTTTGAAGAAATGTGGTGGTGTACCGCTAGCAATCATCA CTACAGCATGCCTACTTGCTAGCAAACCAAGGAATTCAGAGGAATGGGACAAGGTCAATA AGTCTATCAGTTTGGGGCTTGAGAACAACCTTGATGTGGACAACATGCGGAAGATATTAA GCCTCAGTTACAGCGATCTACCTTTTCATTTGAAGACTTGCTTGTTGTCTCTAAGCAAAT ATACTGAGGATGAGCTAATTAGAAAATATGTTTTGATATGGAGTTGGTTAGCAGAGGGTT TTATTACAGATGAAACACGACCTGCAGGGACAAGCTTGCAGGAGATTGGCGAGAGCTACT TCAACGAGCTCATCAATCGAAGCTTGATCCAGCCAATGAGTGAGAACACTCTTTGGGATG AAGATGGTAAGGTGCATGCATGCAAAGTACATGACATGGTGCTTGAGCTAATAAATCAGC TGTCAGTAGAAGAAGATTTTGTTACAACGTATTTATCTGATGGTCAACAAACAGGTAAAC ATACATGTACAGCACAAAAGAAGAAGATTCGCCGATTATCTCTCCATAACAGCAATAAGT CCTATGCCTCGCCAGAAGCAAGAGAACAATTGTCCAAAGTAAGGTCGATTACTATCTTCG GCAAGGTCGACTCGATACCACCCTTGTCGAGCTTTCATGTCCTGCGTGTGTTGCAGCTTG AGGACTGCAGTGGAATGGACAAGAACCATCTTAATCATCTCGATAAGCTACTCCTCCTAA GATTTCTGCGTCTAGGGCACTATGGTGCCACTGAGCTCCCTGAAAGCATTGGGAAACTGG AATCTCTCGAAACCTTGGACATAAGAGGTGCACGTAAACCAAGTTCTTTTAAATCTCATA AGGTACTGTTTCCAATGTCTTTTGCCAAACTAAGGAAACTGTTGCGGCTATATGCTGGCA GAGTGAAGCTGGCACAAGGTCTGATGCTGGGGGATATGAAATCTTTACAGGAGCTTGTAA TAGAAGCTACCCGAAAGGTAATAAAAGAGATTGGCAATTTGACGGAGCTAAGGACTCTTA GGATCGTTTTCAGTAGTGAAAAAACATTTGAGTTAAAGGAATCCATTCAAACGTCTATAC AAAGGTTCACCAATTTGCAAGACCTAGATTTGAGAAATAATAATAGTTTTGAAGAAATCA TAGACATGCAACAGGTTCCTTCTGGTCTCCAAAGGTTGTTCATGCACCATTCGTATATGA AAGCATTCCCATGTTGGATCAATTCGTCGATGCTCTCCCGCCTCACCACCTTATCCATTT GGCTGTGTTTTGAATATCTCCAGTCTGACCACCTTGATCGCCTCGCTGAGCTTCCATCTC TTCGCTTTCTCAGGCTACAGTTAGCATTTGTTTCGGAACAACTATAGGAAAAGCTCACTA TCCACAGAGGTGCATGTG