Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0552200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22417223:22419263:1 gene:Os12g0552200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II lambda description:Similar to Patatin-like phospholipase family protein. (Os12t0552200-01)
Sequence	ACACACACTTATCAGTCGGATCCATCTCCTACAAATGATGCTTTCCTTCACCTCTGCTCG TCTCCTCCCTCGTTGCCGGCGTCTCTACAGTGCCTGCGGCGCCGGCGCAGCTGCGTGCGG CGTCGTCGGCGAGAGGGTGACCGTGCTGACCATCGACGGCGGCGGCATCCGAGGCGTCAT CCCGGGCACGGTGCTCGCGTTCCTGGAGGGCGAGCTCCAGCGGCTGGATGGCCCGGGCGC GAGGCTCGCCGACTACTTCGATGCTGGCTCATCACCGGCGGGCTCATCACCGCGATGCTG GCCGCGCCCGGCGAAGGGGCGGACAGGGACGGGCGGCGGCGGCGGCGGCCGATGTTCGCC GCCGCGGACATTACCCCGTTCTACCTCGAGCACGGCCCACGCATCTTCCCGCAGCGGTGG AGCACGCTCGCCGCCAAGATCGCCGCCGCGCGGGGGCCCAAGTATGATGGCCGGTATCTC CGTGGCGTGGTCCGGAGGATGCTCGGCGAGACGACGGTGGGCGACACGCTCACCAATGTC GTCGTCCCCACCTTCGACGTCCGCCTGCTCCAGCCCGTCATCTTCTCCACATACGAGGCG AAGAACTCGCCTCTGAAGAACGCGCTGCTCTCCGACGTATGCATCGGCACGTCGTCGGCG CCGACGTACCTCCCCGCGCACTGCTTCCGGACACACGACGGCGCCAGCGGCGAAACGCGC GAGTACAACCTCATCGACGGCGGTGTCGCCGCCAACAACCCTACGATGGTGGCCATGACA ATGATCACGGAGGAGATCATGGCGAAGGAGAAGGCGGCGGCGCTGTACCTGCTGAAGCCG CCGCCGGAGGAGGAGGAGGAGCACGGCCGGTTCCTGGTGCTGTCCATCGGCACCGGCCTG ACCTCCGACGAGGGCCTCTACACGGCGGAGAAGTGCTCCCGGTGGGGGGCGCTCTCGTGG CTGCGCCACGGCGGGATGGCCCCCATCATCGACATCTTCATGGCGGCGAGTTCCGACCTC GTCGACATCCACGTCGCCGTCAAGTTCCAGCTGCTCCACAGCGAGCGGAACTACCTCCGC GTGCAGGCCAACTCGCTGCGCGGTGCGGCGGCGGCGGTGGACGCGGCGACGCCGGAGAAC ATGGGGAGCCTCGTCGGCGTCGGCGAGCGGTTGCTGGCGCAGCGGGTGTCGAGGGTGAAC GTGGAGACCGGGAGGTACGAGGAGGTGCCCGGCGAGGGGAGCAACGCCGACGCGCTTGCT CGGATCGCCGGGAATCTCTCCGAGGAGAGGACGGCGAGGATCAAGCGGCGGAACACTGTG CAGGCTGGTGTGACTGGGTTTTAG

Peptide Sequence

PEP ID	Os12t0552200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22417223:22419263:1 gene:Os12g0552200 transcript:Os12t0552200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II lambda description:Similar to Patatin-like phospholipase family protein. (Os12t0552200-01)
Sequence	THTYQSDPSPTNDAFLHLCSSPPSLPASLQCLRRRRSCVRRRRREGDRADHRRRRHPRRH PGHGARVPGGRAPAAGWPGREARRLLRCWLITGGLITAMLAAPGEGADRDGRRRRRPMFA AADITPFYLEHGPRIFPQRWSTLAAKIAAARGPKYDGRYLRGVVRRMLGETTVGDTLTNV VVPTFDVRLLQPVIFSTYEAKNSPLKNALLSDVCIGTSSAPTYLPAHCFRTHDGASGETR EYNLIDGGVAANNPTMVAMTMITEEIMAKEKAAALYLLKPPPEEEEEHGRFLVLSIGTGL TSDEGLYTAEKCSRWGALSWLRHGGMAPIIDIFMAASSDLVDIHVAVKFQLLHSERNYLR VQANSLRGAAAAVDAATPENMGSLVGVGERLLAQRVSRVNVETGRYEEVPGEGSNADALA RIAGNLSEERTARIKRRNTVQAGVTGF

Transcript Sequence

Transcript ID	Os12t0552200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22417223:22419263:1 gene:Os12g0552200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Patatin-related phospholipase A II lambda description:Similar to Patatin-like phospholipase family protein. (Os12t0552200-01)
Sequence	AACACACACTTATCAGTCGGATCCATCTCCTACAAATGATGCTTTCCTTCACCTCTGCTC GTCTCCTCCCTCGTTGCCGGCGTCTCTACAGTGCCTGCGGCGCCGGCGCAGCTGCGTGCG GCGTCGTCGGCGAGAGGGTGACCGTGCTGACCATCGACGGCGGCGGCATCCGAGGCGTCA TCCCGGGCACGGTGCTCGCGTTCCTGGAGGGCGAGCTCCAGCGGCTGGATGGCCCGGGCG CGAGGCTCGCCGACTACTTCGATGCTGGCTCATCACCGGCGGGCTCATCACCGCGATGCT GGCCGCGCCCGGCGAAGGGGCGGACAGGGACGGGCGGCGGCGGCGGCGGCCGATGTTCGC CGCCGCGGACATTACCCCGTTCTACCTCGAGCACGGCCCACGCATCTTCCCGCAGCGGTG GAGCACGCTCGCCGCCAAGATCGCCGCCGCGCGGGGGCCCAAGTATGATGGCCGGTATCT CCGTGGCGTGGTCCGGAGGATGCTCGGCGAGACGACGGTGGGCGACACGCTCACCAATGT CGTCGTCCCCACCTTCGACGTCCGCCTGCTCCAGCCCGTCATCTTCTCCACATACGAGGC GAAGAACTCGCCTCTGAAGAACGCGCTGCTCTCCGACGTATGCATCGGCACGTCGTCGGC GCCGACGTACCTCCCCGCGCACTGCTTCCGGACACACGACGGCGCCAGCGGCGAAACGCG CGAGTACAACCTCATCGACGGCGGTGTCGCCGCCAACAACCCTACGATGGTGGCCATGAC AATGATCACGGAGGAGATCATGGCGAAGGAGAAGGCGGCGGCGCTGTACCTGCTGAAGCC GCCGCCGGAGGAGGAGGAGGAGCACGGCCGGTTCCTGGTGCTGTCCATCGGCACCGGCCT GACCTCCGACGAGGGCCTCTACACGGCGGAGAAGTGCTCCCGGTGGGGGGCGCTCTCGTG GCTGCGCCACGGCGGGATGGCCCCCATCATCGACATCTTCATGGCGGCGAGTTCCGACCT CGTCGACATCCACGTCGCCGTCAAGTTCCAGCTGCTCCACAGCGAGCGGAACTACCTCCG CGTGCAGGCCAACTCGCTGCGCGGTGCGGCGGCGGCGGTGGACGCGGCGACGCCGGAGAA CATGGGGAGCCTCGTCGGCGTCGGCGAGCGGTTGCTGGCGCAGCGGGTGTCGAGGGTGAA CGTGGAGACCGGGAGGTACGAGGAGGTGCCCGGCGAGGGGAGCAACGCCGACGCGCTTGC TCGGATCGCCGGGAATCTCTCCGAGGAGAGGACGGCGAGGATCAAGCGGCGGAACACTGT GCAGGCTGGTGTGACTGGGTTTTAGGAGTAGTCATGAAATCCCATCATGTCCCATTGCTC CACGTCTATTGTATTTCCGGGCGGGGGCCATTCCGAATTTCCGGTCGATCATCTCAAAAT GTTTTTTCGGTTGAAAAATTCGGTATATGCTGTTAAAAAGTTTAAATAAGGTAAATAAAT AATACCAGCTCCGTTTTATATT