Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0551200-03
CDS Infomation	cds chromosome:IRGSP-1.0:12:22328237:22334829:-1 gene:Os12g0551200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os12t0551200-01);Similar to cDNA clone:001-124-E09, full insert sequence. (Os12t0551200-02);Hypothetical conserved gene. (Os12t0551200-03)
Sequence	ATGGCTTATGGGCTTGATCACTCTGAGTGGCTGGAAGTTAAATATATCAACAACCATGCT CTGTTTGTAGGGTACCTGTCGATGGCCGTCAAAGGGGTGGGCTTCTTGGTGGGTTTATGG ACCACCGTTGTTCTTCTTGGTGGCTTCGTCTCTATGCTTGAGAAGAAGGATTTCTGGAGT CTCACCATCATCACACTCGTCCAAACAGCAGGGGTGTTCGATGTTCTCCTGAACGAAAAG CTGCGCCATGCTGTGAATTCAGTCGATGGCTTCTTGGTTACTATGGACATGGTGTTCAGG TGCGAAGACGAGGAGTTCGACTCGGGCATCCAGTTGTGGCGTTCACGAGCAGGACGTCTT GTGACGTTCATCCAGGCGGTGGTGTTCGCCATCATACTGTGCCCTCTGGCTGTGCTCTAC CTGTCTGGGCTGGTCATCAGCACTAGTCTATCGCTGTGGCGCCTCATACAGCACGACTAC GGCGACGGCGACGGCAGCGCCAACCTGACTCCGGCGCTCAATGTGCTCTACTCACTGGCA CTCTTCCAGGGCGTCCTCTTCTTCTACCAGTGGGTGTCCTACTTCGCCGGGAAAAGGTTG ATCGAAAAGGTGGCCAGTAAATATTGGCAAAACAGTAAGGAGGCTGGCGGGGCGGGGGCG CGGGCGGGGGCGTGGCGCAAATTGGTGAAGGTGTACATGAAGAAGACCAAGATCCGGTGC GAGAAGGATCCATCCTTCCTAGAAGAGTGGAACCTGGTGACGTTTGCCGTGGAGCTGATG AAGCCGGAGTCCAAGTCCAGCGACTACGTGTCCGGGGCGATGATCCTGGACACGATCCTC GGGCAGAAGGACCTGACGGCGCAGCACGCGCTGATCAGGAAGCTGGTCGGCTCGGCGTCC TCCAGGAAGGTGATGAAGAAGCTGCTGCGGTCGCTTCGGTCCGCGAGCCAGTACAACCGG AACATCCGGGTGCACGCCGCCCGGATCGTGTCGCGTCTCGCCGGCGAGATCAGCCTCGCC AGCTTCCCGGAGGCGCTCTCGTGCATATCGTCGCTGCTCGACACCACCACCACGGAGCAG CAGGAACAGCAGCAGCAAGACGGAGACAGTGCGCCGTCCGCTCACTACAGGGATCTCATG GTGCTGGGCCGCGTCATCCTTCAGAAGCTCGCCGCCGCCGACGAGCACAACCTTTTTCTC ATCGGCAAAAAGCAGAGCACTATCTCCAAGGCCATGCTGCCCGTCAGAAAAGACCTGCTC CACATCCACAACAACGGCCATGTCGACGCATGGAAGGACATCGTGACCGAGTCACTGCAG CTCATGTCCCAGCTTGTCAGCGCCCCTGGGAAGACCGGCGACGATCTGCGCTCCCACATC TTGACGATTCACAAAGACGACATCAGAGTGAATAACATTATCATCTGTAAGCAATGCCAA AGCAACAAGAAGCTCCACATGCAGGCCATTAACATCTTCACACAGCAACAGCATCCTATG GAAGCACTTTCGACGACGTCTTCGAATATAGACACAACATATAGCGAAACGAACATCAGG CTGCTCGTAGACATCTTCTTGACTAACAAGGACGCCTCCACAAGAAAAATGGCAGTTGGC ATACTGGCAATACTGCTGTCCGACCAAAATAAAAGCAATGCCAATGCCAATGCCACCATT ATCTTCAAGGCAAGTGACACCGTTGTCCGTGATCTCAAGACAGTGCTTTTAGATGATGAG GAAACAGAATACAGAATATGCGCAGCAGAAATACTCGAGCATCTACACAGGACAAAGGAA GCCTCCTATCTCAAGAAACTGATGGAAGCCATGCAAAATGTGCTACCGAAGATTCTCAAC GAAATATTTATCTCTCTCTCTCCACCTAAGCAAGGAGAAAAGCAAGCAGAAAAGGCAGAA AAAGGAACAGACGGAACCAAGACAGATCCTGACATTGAAGAAGGTGCTGGTGCCGTTGCT TCGAAAGATAATGTCGACGTCAATGACCAGAAGGAGGACATTGGTAAGAAAAAAAAGGAC AGGACGAGGAAACTACATGCAGCTTTACTGTCACTTAGTGTGGCAATATTTGAAAAACGG ATCAGAGATGGTAAAGATTTGGATACACTTGCTGGTGAAATTGCCCGAGGAGACTCTGCA TCCAGCTTTGTCGGTAAGCTGAGGACGATGGTAGATCAAAACAGTGAACAAACAGTCAAT TGCCTGAGAATTCTGAAGATTGCCACTAGGATGATCATATCACTGCTAAAACTTGAAGGA TGCTACCCCAAACAAGAGCTGGAGAACTTGATGGTATCTCTGTCCAAAGCTTCCGAACAA ATGTTTGAACTGGAAGCGTTGATGATGTTATCTAGCAGCGACCATACCGGAAAGAAGACT GAAAGCTTCGGTTCTCTCGTGAAAGAAGCAGAAGGCCTTATGAAGAATAAGAAGGAAAAA AATGTGGCAACTACACCAGCTAGCACTATGAATGGAAACCAGTAG

Peptide Sequence

PEP ID	Os12t0551200-03
PEP Infomation	pep chromosome:IRGSP-1.0:12:22328237:22334829:-1 gene:Os12g0551200 transcript:Os12t0551200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os12t0551200-01);Similar to cDNA clone:001-124-E09, full insert sequence. (Os12t0551200-02);Hypothetical conserved gene. (Os12t0551200-03)
Sequence	MAYGLDHSEWLEVKYINNHALFVGYLSMAVKGVGFLVGLWTTVVLLGGFVSMLEKKDFWS LTIITLVQTAGVFDVLLNEKLRHAVNSVDGFLVTMDMVFRCEDEEFDSGIQLWRSRAGRL VTFIQAVVFAIILCPLAVLYLSGLVISTSLSLWRLIQHDYGDGDGSANLTPALNVLYSLA LFQGVLFFYQWVSYFAGKRLIEKVASKYWQNSKEAGGAGARAGAWRKLVKVYMKKTKIRC EKDPSFLEEWNLVTFAVELMKPESKSSDYVSGAMILDTILGQKDLTAQHALIRKLVGSAS SRKVMKKLLRSLRSASQYNRNIRVHAARIVSRLAGEISLASFPEALSCISSLLDTTTTEQ QEQQQQDGDSAPSAHYRDLMVLGRVILQKLAAADEHNLFLIGKKQSTISKAMLPVRKDLL HIHNNGHVDAWKDIVTESLQLMSQLVSAPGKTGDDLRSHILTIHKDDIRVNNIIICKQCQ SNKKLHMQAINIFTQQQHPMEALSTTSSNIDTTYSETNIRLLVDIFLTNKDASTRKMAVG ILAILLSDQNKSNANANATIIFKASDTVVRDLKTVLLDDEETEYRICAAEILEHLHRTKE ASYLKKLMEAMQNVLPKILNEIFISLSPPKQGEKQAEKAEKGTDGTKTDPDIEEGAGAVA SKDNVDVNDQKEDIGKKKKDRTRKLHAALLSLSVAIFEKRIRDGKDLDTLAGEIARGDSA SSFVGKLRTMVDQNSEQTVNCLRILKIATRMIISLLKLEGCYPKQELENLMVSLSKASEQ MFELEALMMLSSSDHTGKKTESFGSLVKEAEGLMKNKKEKNVATTPASTMNGNQ

Transcript Sequence

Transcript ID	Os12t0551200-03
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22328237:22334829:-1 gene:Os12g0551200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-like helical domain containing protein. (Os12t0551200-01);Similar to cDNA clone:001-124-E09, full insert sequence. (Os12t0551200-02);Hypothetical conserved gene. (Os12t0551200-03)
Sequence	AAATGACCTCACTCTTTTGAGGACGAACTAACAATGGCTTATGGGCTTGATCACTCTGAG TGGCTGGAAGTTAAATATATCAACAACCATGCTCTGTTTGTAGGGTACCTGTCGATGGCC GTCAAAGGGGTGGGCTTCTTGGTGGGTTTATGGACCACCGTTGTTCTTCTTGGTGGCTTC GTCTCTATGCTTGAGAAGAAGGATTTCTGGAGTCTCACCATCATCACACTCGTCCAAACA GCAGGGGTGTTCGATGTTCTCCTGAACGAAAAGCTGCGCCATGCTGTGAATTCAGTCGAT GGCTTCTTGGTTACTATGGACATGGTGTTCAGGTGCGAAGACGAGGAGTTCGACTCGGGC ATCCAGTTGTGGCGTTCACGAGCAGGACGTCTTGTGACGTTCATCCAGGCGGTGGTGTTC GCCATCATACTGTGCCCTCTGGCTGTGCTCTACCTGTCTGGGCTGGTCATCAGCACTAGT CTATCGCTGTGGCGCCTCATACAGCACGACTACGGCGACGGCGACGGCAGCGCCAACCTG ACTCCGGCGCTCAATGTGCTCTACTCACTGGCACTCTTCCAGGGCGTCCTCTTCTTCTAC CAGTGGGTGTCCTACTTCGCCGGGAAAAGGTTGATCGAAAAGGTGGCCAGTAAATATTGG CAAAACAGTAAGGAGGCTGGCGGGGCGGGGGCGCGGGCGGGGGCGTGGCGCAAATTGGTG AAGGTGTACATGAAGAAGACCAAGATCCGGTGCGAGAAGGATCCATCCTTCCTAGAAGAG TGGAACCTGGTGACGTTTGCCGTGGAGCTGATGAAGCCGGAGTCCAAGTCCAGCGACTAC GTGTCCGGGGCGATGATCCTGGACACGATCCTCGGGCAGAAGGACCTGACGGCGCAGCAC GCGCTGATCAGGAAGCTGGTCGGCTCGGCGTCCTCCAGGAAGGTGATGAAGAAGCTGCTG CGGTCGCTTCGGTCCGCGAGCCAGTACAACCGGAACATCCGGGTGCACGCCGCCCGGATC GTGTCGCGTCTCGCCGGCGAGATCAGCCTCGCCAGCTTCCCGGAGGCGCTCTCGTGCATA TCGTCGCTGCTCGACACCACCACCACGGAGCAGCAGGAACAGCAGCAGCAAGACGGAGAC AGTGCGCCGTCCGCTCACTACAGGGATCTCATGGTGCTGGGCCGCGTCATCCTTCAGAAG CTCGCCGCCGCCGACGAGCACAACCTTTTTCTCATCGGCAAAAAGCAGAGCACTATCTCC AAGGCCATGCTGCCCGTCAGAAAAGACCTGCTCCACATCCACAACAACGGCCATGTCGAC GCATGGAAGGACATCGTGACCGAGTCACTGCAGCTCATGTCCCAGCTTGTCAGCGCCCCT GGGAAGACCGGCGACGATCTGCGCTCCCACATCTTGACGATTCACAAAGACGACATCAGA GTGAATAACATTATCATCTGTAAGCAATGCCAAAGCAACAAGAAGCTCCACATGCAGGCC ATTAACATCTTCACACAGCAACAGCATCCTATGGAAGCACTTTCGACGACGTCTTCGAAT ATAGACACAACATATAGCGAAACGAACATCAGGCTGCTCGTAGACATCTTCTTGACTAAC AAGGACGCCTCCACAAGAAAAATGGCAGTTGGCATACTGGCAATACTGCTGTCCGACCAA AATAAAAGCAATGCCAATGCCAATGCCACCATTATCTTCAAGGCAAGTGACACCGTTGTC CGTGATCTCAAGACAGTGCTTTTAGATGATGAGGAAACAGAATACAGAATATGCGCAGCA GAAATACTCGAGCATCTACACAGGACAAAGGAAGCCTCCTATCTCAAGAAACTGATGGAA GCCATGCAAAATGTGCTACCGAAGATTCTCAACGAAATATTTATCTCTCTCTCTCCACCT AAGCAAGGAGAAAAGCAAGCAGAAAAGGCAGAAAAAGGAACAGACGGAACCAAGACAGAT CCTGACATTGAAGAAGGTGCTGGTGCCGTTGCTTCGAAAGATAATGTCGACGTCAATGAC CAGAAGGAGGACATTGGTAAGAAAAAAAAGGACAGGACGAGGAAACTACATGCAGCTTTA CTGTCACTTAGTGTGGCAATATTTGAAAAACGGATCAGAGATGGTAAAGATTTGGATACA CTTGCTGGTGAAATTGCCCGAGGAGACTCTGCATCCAGCTTTGTCGGTAAGCTGAGGACG ATGGTAGATCAAAACAGTGAACAAACAGTCAATTGCCTGAGAATTCTGAAGATTGCCACT AGGATGATCATATCACTGCTAAAACTTGAAGGATGCTACCCCAAACAAGAGCTGGAGAAC TTGATGGTATCTCTGTCCAAAGCTTCCGAACAAATGTTTGAACTGGAAGCGTTGATGATG TTATCTAGCAGCGACCATACCGGAAAGAAGACTGAAAGCTTCGGTTCTCTCGTGAAAGAA GCAGAAGGCCTTATGAAGAATAAGAAGGAAAAAAATGTGGCAACTACACCAGCTAGCACT ATGAATGGAAACCAGTAGATTGAGTAGATTATCAACTAATCTGCTGATATTCACAATAAA GAACTTTGGCGTTCCCAGAAAATTGTTTGTCATAAAGATATTCTGTAGGATAAACTCCTT ATTCTGTAGCATGTGTGCTGAAATCTAGCTATTTGTCCCATCTACTTATCAAACATTCAA GTAAAAACTCACTATGAAACGGTTGAGAT