Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0548800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22213958:22218978:1 gene:Os12g0548800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os12t0548800-01)
Sequence	TCAGTCGATCCCCACCGCCGGCGGCCATCGTCCCCGGCGTTCATCTCCGTCCGCCGGCGT GCTCCTCGCCCCGCATCAGCTTCGTCCGTCGCGGGCTCGCGGCTCTCCGGCAGCATCAGC CTCACCCCGCCGTCCCTCGTCCCGGCTGCCTTGTCCCTCCTCGCCCATCGCCGACGAGAA GACTTGCAGTTGACCTCCACTCTGCACATCTGCAAGGGAAGAATGACTAGTGGAATGGAG CCCGTTGATGACTCAGAGTGGGAGGAAGTTAGCTCCATCAACAACTACGCGCTGTTCATG GGACACATGTCTATGGCCGTCAAGGGGCTAGGTTATCTTCTTGTTTTATGGACCACTGTT ATCCTTCTTGGTGGCTTCGTCTCCATACTGGGGAAGAAGGATTTTTGGTGTCTCACAATA ATTACCCTTGTCCAGACCGCTGGAGTCTCCGACATCTTTCTGAACGAAAAGCTACGATAT ACTTGGAGGTCGTTTTTAGGCTTTTTCTCAGCTACGGATACATTGGAAACGGAAAGGGGT GCCATTAGCTGGTTCTATGGCCGATCACGGTCACGCTCCTACTACCTGAACAACCTAGTA GTAGTTGTCATATGGCTGCTCCATTTGTTCGTGTTTGCCACCATCATCTGCCCTCTAGCG GTGCTCTACATGTTTGGGCTGATCATCACCACTGCCATATCCGCGTGTCGTCTGATACAG CATGACTACGGGGGTGAGGTCAACAATGGCGGCGCCAACCTGAAATCTGCGCTGAAGTTC GTCTACTCCATCGCCTTGCTCCAGGGTGTGCTCTTCTGTTACCGGTTCACATTGTGCTAT GAGCAGAAAAGGCTGGTGGATTTGGTGGTTAACAAATATCGCTTTGTTACTAGTTTGAGC GAGTCAGTGATGGCGTACATGCAAGAGACGATGATCGGGTGTGAGAAGGACCCGTCATTC GTCAAAGGAAGGAACCTGGTCACATATGCCGTCGGTTTAACCAAGTCTGGATCCCCTGAT GGCTTCCTCTCTGGGGTGAGGATCCTGGACTCCCTCCTGAATACGCCAATGTACAAGTAC AATTTCTTTCTCGAGGTTGAGGTCGAGGTCGAAGAGCAGAAAGCAATGGTAAAGCAGCTC CTCCTATCGGCATCCTACAGCCAAGATGGCGGCCTGCACACACTGCTGCAGTCACTTGAT TGTACGAGGGCATACAATGCCGAGGCGAGGGAGCACGCTGCAAGGATCGTGGCGCACCTT GCTGGTGACCTCCACCTGGAGCAGTTTCCACAAGGGATCCATTGCATAGCTTCTCTGCTC GAAGGTCCCCCTAAGGATTGTGATGGCAACATCCCTGTAAATTACCGAGAACTGATGCTG CAGGGCCTGAGTATCCTCATGAAGCTCGCTGCACACGAGGACTGTCAGCGATCCATCAAC AAGACGGAGGGCCTGCTAGCCAAGATCATGGCGCCTCTGCGGTCTGGCCTGCTCAACCAC AACGATGACCCTAATAGTGCGTGGTTCAGAACAGTGCATGCTTCGATGGTTGTGATTCTC CGGCTTGTGGATGCTCCTGGCCAGACTGGCAAGGAACTCCGCCGCAAAATCTCAGGAGAC GTGGAAGCCATGGCTAGTATGGAGAGGATTCTAGGTTGCCAAGGATGTGGGCTCGGATCG TTCCATGATAGTTCCCTGTTTATGCAAGCATTGGACATTTACACACGAATGCACGAGCAC ACGCTTTCTAACATAGTGACGAGGGAATATTTCATTGAGAAATTGTTACTCATCTTCACT CACAAAGTTTATAAGGAGGCCAACATCATTTTTGGGTTGGCAGTGGTAGGTGAAAAGCTT GCGACGCTATGTTCCCATGGCAAAGCAAATGCCAAGTTAATCTTACAAGTGAAAGATGAT GTCGTTGGTGATCTCACAAAAATACTTGTACAAGACAGATATCCCAAGGAATACAGAATA AGCGCCGCGCAAATCCTCGAGCAGCTGTGTGTTCATCACACTGATGATGATGAATATATC CAGAGCCTCAAGGAAGCCTTAAAGGTTAAGAGTCCAGAGGTGCTTGTGAGAACACTTCGT GCCGAATCTGTGGACAGACAAATGCTGGCGGCAGTTTTATCTCTGATTGTGACGATGACA CGAAACTTAATGGATGCTGAAGATTTGCCTCCTCTTATCGATGCAATTAACAGGGCAGCC AACGGCTTCAGCATCTTAACGGAGCTCCAATCGATGGTCACAAAGCTGTCAATGAAGAGT AAGGTGACTATAGTGAACAGATTGAACACATTGAAGCTTATCACTGAGATATTCATACTA ATCGTTAGACATGGAAGCCGTTACACCGTAGAAGAAGCAGAGAACTTGATTAAATCACTG TCGAAGGCTGCGAGGAACATGTCGGAAATCGAGGACATCATGGTTATCTCTGGCTGTAGC AGCAGCCTAAAGACTCTTGGTTCCCTCGTGAAAGAAGCTGAGGAACTCCTGCCTAGAGCA AGGGCATCCGAAATGGAAGTGATAATTGAGCATCCTAGCTGTGTCAATCGAAATCAGATT AATTAA

Peptide Sequence

PEP ID	Os12t0548800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22213958:22218978:1 gene:Os12g0548800 transcript:Os12t0548800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os12t0548800-01)
Sequence	SVDPHRRRPSSPAFISVRRRAPRPASASSVAGSRLSGSISLTPPSLVPAALSLLAHRRRE DLQLTSTLHICKGRMTSGMEPVDDSEWEEVSSINNYALFMGHMSMAVKGLGYLLVLWTTV ILLGGFVSILGKKDFWCLTIITLVQTAGVSDIFLNEKLRYTWRSFLGFFSATDTLETERG AISWFYGRSRSRSYYLNNLVVVVIWLLHLFVFATIICPLAVLYMFGLIITTAISACRLIQ HDYGGEVNNGGANLKSALKFVYSIALLQGVLFCYRFTLCYEQKRLVDLVVNKYRFVTSLS ESVMAYMQETMIGCEKDPSFVKGRNLVTYAVGLTKSGSPDGFLSGVRILDSLLNTPMYKY NFFLEVEVEVEEQKAMVKQLLLSASYSQDGGLHTLLQSLDCTRAYNAEAREHAARIVAHL AGDLHLEQFPQGIHCIASLLEGPPKDCDGNIPVNYRELMLQGLSILMKLAAHEDCQRSIN KTEGLLAKIMAPLRSGLLNHNDDPNSAWFRTVHASMVVILRLVDAPGQTGKELRRKISGD VEAMASMERILGCQGCGLGSFHDSSLFMQALDIYTRMHEHTLSNIVTREYFIEKLLLIFT HKVYKEANIIFGLAVVGEKLATLCSHGKANAKLILQVKDDVVGDLTKILVQDRYPKEYRI SAAQILEQLCVHHTDDDEYIQSLKEALKVKSPEVLVRTLRAESVDRQMLAAVLSLIVTMT RNLMDAEDLPPLIDAINRAANGFSILTELQSMVTKLSMKSKVTIVNRLNTLKLITEIFIL IVRHGSRYTVEEAENLIKSLSKAARNMSEIEDIMVISGCSSSLKTLGSLVKEAEELLPRA RASEMEVIIEHPSCVNRNQIN

Transcript Sequence

Transcript ID	Os12t0548800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22213958:22218978:1 gene:Os12g0548800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Armadillo-type fold domain containing protein. (Os12t0548800-01)
Sequence	ATCAGTCGATCCCCACCGCCGGCGGCCATCGTCCCCGGCGTTCATCTCCGTCCGCCGGCG TGCTCCTCGCCCCGCATCAGCTTCGTCCGTCGCGGGCTCGCGGCTCTCCGGCAGCATCAG CCTCACCCCGCCGTCCCTCGTCCCGGCTGCCTTGTCCCTCCTCGCCCATCGCCGACGAGA AGACTTGCAGTTGACCTCCACTCTGCACATCTGCAAGGGAAGAATGACTAGTGGAATGGA GCCCGTTGATGACTCAGAGTGGGAGGAAGTTAGCTCCATCAACAACTACGCGCTGTTCAT GGGACACATGTCTATGGCCGTCAAGGGGCTAGGTTATCTTCTTGTTTTATGGACCACTGT TATCCTTCTTGGTGGCTTCGTCTCCATACTGGGGAAGAAGGATTTTTGGTGTCTCACAAT AATTACCCTTGTCCAGACCGCTGGAGTCTCCGACATCTTTCTGAACGAAAAGCTACGATA TACTTGGAGGTCGTTTTTAGGCTTTTTCTCAGCTACGGATACATTGGAAACGGAAAGGGG TGCCATTAGCTGGTTCTATGGCCGATCACGGTCACGCTCCTACTACCTGAACAACCTAGT AGTAGTTGTCATATGGCTGCTCCATTTGTTCGTGTTTGCCACCATCATCTGCCCTCTAGC GGTGCTCTACATGTTTGGGCTGATCATCACCACTGCCATATCCGCGTGTCGTCTGATACA GCATGACTACGGGGGTGAGGTCAACAATGGCGGCGCCAACCTGAAATCTGCGCTGAAGTT CGTCTACTCCATCGCCTTGCTCCAGGGTGTGCTCTTCTGTTACCGGTTCACATTGTGCTA TGAGCAGAAAAGGCTGGTGGATTTGGTGGTTAACAAATATCGCTTTGTTACTAGTTTGAG CGAGTCAGTGATGGCGTACATGCAAGAGACGATGATCGGGTGTGAGAAGGACCCGTCATT CGTCAAAGGAAGGAACCTGGTCACATATGCCGTCGGTTTAACCAAGTCTGGATCCCCTGA TGGCTTCCTCTCTGGGGTGAGGATCCTGGACTCCCTCCTGAATACGCCAATGTACAAGTA CAATTTCTTTCTCGAGGTTGAGGTCGAGGTCGAAGAGCAGAAAGCAATGGTAAAGCAGCT CCTCCTATCGGCATCCTACAGCCAAGATGGCGGCCTGCACACACTGCTGCAGTCACTTGA TTGTACGAGGGCATACAATGCCGAGGCGAGGGAGCACGCTGCAAGGATCGTGGCGCACCT TGCTGGTGACCTCCACCTGGAGCAGTTTCCACAAGGGATCCATTGCATAGCTTCTCTGCT CGAAGGTCCCCCTAAGGATTGTGATGGCAACATCCCTGTAAATTACCGAGAACTGATGCT GCAGGGCCTGAGTATCCTCATGAAGCTCGCTGCACACGAGGACTGTCAGCGATCCATCAA CAAGACGGAGGGCCTGCTAGCCAAGATCATGGCGCCTCTGCGGTCTGGCCTGCTCAACCA CAACGATGACCCTAATAGTGCGTGGTTCAGAACAGTGCATGCTTCGATGGTTGTGATTCT CCGGCTTGTGGATGCTCCTGGCCAGACTGGCAAGGAACTCCGCCGCAAAATCTCAGGAGA CGTGGAAGCCATGGCTAGTATGGAGAGGATTCTAGGTTGCCAAGGATGTGGGCTCGGATC GTTCCATGATAGTTCCCTGTTTATGCAAGCATTGGACATTTACACACGAATGCACGAGCA CACGCTTTCTAACATAGTGACGAGGGAATATTTCATTGAGAAATTGTTACTCATCTTCAC TCACAAAGTTTATAAGGAGGCCAACATCATTTTTGGGTTGGCAGTGGTAGGTGAAAAGCT TGCGACGCTATGTTCCCATGGCAAAGCAAATGCCAAGTTAATCTTACAAGTGAAAGATGA TGTCGTTGGTGATCTCACAAAAATACTTGTACAAGACAGATATCCCAAGGAATACAGAAT AAGCGCCGCGCAAATCCTCGAGCAGCTGTGTGTTCATCACACTGATGATGATGAATATAT CCAGAGCCTCAAGGAAGCCTTAAAGGTTAAGAGTCCAGAGGTGCTTGTGAGAACACTTCG TGCCGAATCTGTGGACAGACAAATGCTGGCGGCAGTTTTATCTCTGATTGTGACGATGAC ACGAAACTTAATGGATGCTGAAGATTTGCCTCCTCTTATCGATGCAATTAACAGGGCAGC CAACGGCTTCAGCATCTTAACGGAGCTCCAATCGATGGTCACAAAGCTGTCAATGAAGAG TAAGGTGACTATAGTGAACAGATTGAACACATTGAAGCTTATCACTGAGATATTCATACT AATCGTTAGACATGGAAGCCGTTACACCGTAGAAGAAGCAGAGAACTTGATTAAATCACT GTCGAAGGCTGCGAGGAACATGTCGGAAATCGAGGACATCATGGTTATCTCTGGCTGTAG CAGCAGCCTAAAGACTCTTGGTTCCCTCGTGAAAGAAGCTGAGGAACTCCTGCCTAGAGC AAGGGCATCCGAAATGGAAGTGATAATTGAGCATCCTAGCTGTGTCAATCGAAATCAGAT TAATTAAATCGTACATAATCTGTATTATTTTAATCCATACCCTCATTGGAAAACTGTGTG CCGGGGAAATCTGATAATCGATCTGAAAACCGAAATTAAAAATTACTCGTGCCGGTCAGT AATAAAATCAAAGTGAAAATCGGCCTTTAATCATCTGAGGCCAATGTATAGTATTTTTTT TCTTACACTTTTGTACATTCCATTTTGCTGTTCTTCTCTTCTTTTTTTCTACTCTTTCCC AATCATGTAACAATGTAACTTATCATTTCTATCAATGAAATGGCTATAAGGTAGAGCTGG CTCTACGTTCTTATGTTT