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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0548401-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:22193325:22193831:-1 gene:Os12g0548401 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteinase inhibitor. (Os12t0548401-01)
Sequence

ATGGCCGGAGTTGTGAGGTCGGCGGCGTGCAGCGGCGGCGAGGGGGAGCGGAAGACGTCG
TGGCCGGAGGTGGTGGGGCTGTCGGCGGAGGAGGCGAAGAAGGTGATCCTCAAGGACATG
CCCGACGCCGACATCGTCGTGCTTCCGGCGGGGTCGCCGGTGACCCTCGACTTCCGCTCC
AACCGCGTCCGCATCTTCGTTGACACCGTCGCCGGCACCCCCACCATCGGCTAG

Peptide Sequence

PEP ID

Os12t0548401-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:22193325:22193831:-1 gene:Os12g0548401 transcript:Os12t0548401-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteinase inhibitor. (Os12t0548401-01)
Sequence

MAGVVRSAACSGGEGERKTSWPEVVGLSAEEAKKVILKDMPDADIVVLPAGSPVTLDFRS
NRVRIFVDTVAGTPTIG

Transcript Sequence

Transcript ID

Os12t0548401-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:22193325:22193831:-1 gene:Os12g0548401 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Proteinase inhibitor. (Os12t0548401-01)
Sequence

AAGCTAGCTACATATATATATATATATATATATATATATACTCTCTCCAAAGTTTACATT
GCTGATATATAGCTCATCATCATCAATCGATCATGGCCGGAGTTGTGAGGTCGGCGGCGT
GCAGCGGCGGCGAGGGGGAGCGGAAGACGTCGTGGCCGGAGGTGGTGGGGCTGTCGGCGG
AGGAGGCGAAGAAGGTGATCCTCAAGGACATGCCCGACGCCGACATCGTCGTGCTTCCGG
CGGGGTCGCCGGTGACCCTCGACTTCCGCTCCAACCGCGTCCGCATCTTCGTTGACACCG
TCGCCGGCACCCCCACCATCGGCTAGCCTCCCTCATCTGCCTTCCTTCAGCGCCCGGGCC
CCCGGCCATCTTTATCTTAATTAAATAATGATCACATGCACGCAAGTGATATGTACTGTG
TGCATGTTTCGATCGATCCATCCCCATCTGAATAATGTTTTACCGTCAATGTTTTTTTCC
TATGAATAAATATGGAAGAATCTTCTC