Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0548200-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:22173286:22180478:-1 gene:Os12g0548200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C82 description:Hypothetical conserved gene. (Os12t0548200-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os12t0548200-02)
Sequence	ATGGACGACTTCCAGGGCCTCCTGGCCCGCGACTTTGGGCTGCGCCCGCAGGGGAAGGCG GCGCCCATGTCGGCCGCCCGCGCCGCCGCGTCCTCCGGATCCGCCTGGTCCAACTCCAGA TCCGCATCGGCGTCCTCCGCCGCCGCCGCCACCGCCCCGCCCGCGCCCTTGTACGATGAC CTCTTCGGGGCCGCGGCGCCCTCCGCCCCGCCGCCCAAGGCCGCGCCCTCGCCCTCCCTC GACGCCATCTTTGACTCCTTCAAGGAGCCCTCCGCCCCGGATGCCCCACCCAAGCCGAAG CACTCGTCCATGCCGGTGTTTGACAAGCCGGTCTACGATGACGACATCTTCGATGGGGTT CCCGGGGTGAAGAGCAGCTCCTCGGCGCGGTTTGACGATGTATTCGGTGGCAGCCACGCG CCGCCGCCACCTGCGTACGATGATCTGCTTGGGGGATTTGGGAGCAAGCCGGAGGTGAAG GAGGTGCTGCCGGAGGAGAAGAGGAAGCCTGAGCCGGCCGCTTCATCGGCTGGGTTTGAT GATTTGATCCCAGGGTTTGGCGGGAGGATCCCGATGCGTGCCAGGGAGACTGTTGGAACT AAAGATAAGAATGTGTCCATGTCAACGTCTAAGCCAGCTAGCATGGCAAGTGACCCATTT GATGTTCTTGGTACAACTTCAACCTCAAAGCATACATCTTCAGGGATATTCACGGATCCC TTGGATGAACTGGGCAGGCCTGCAAAATCTCAAGGGAAAAAACATGATAATACTGCTGTT GACAGTGGCCTATTCGAGGACTCAAGCACTTTTAATCAGGTCCCAAAATCAGAACCTCTG TTTACCTCAGAGTTGAATGATGACTTGAAAGATAGGAATGGCTCCACCAAAGATCGAGAT TCAAGTCCTGTGCAAAATTTTTCCAGAAAAAATACAACCCAAAAACCTTCTGTGGAGAAC TTCGAAAATATCTTTCCTAAGTCACAGTCTGCTCGATATTCTGATGTTCATGTTGACATT GGTGCCTCTGGTTCAGAGAAATACAGTGGGAATGGTATGGATGACCAGTCTCCAAGATCT GATGAGTCCGAAGATGAGATCTGGCTTACAGTTTCTGAGATTCCCCTCTTCACACAGCCA ACTAGTGCCCCACCACCTTCAAGAACACCACCACCTCTTGCTGTTAAGCAAAAACCACAT GGATCACAAGCAAAAAGAAAAGATGACAATTATCCACGCCGGTCTAACCAAAACCACAAT CATCACAGAAGCTCGTCAAATCAAGCTGGTTCTTCTTCAATAGATGAACTGGAAGATTTT GCCATGGGCAAGTCTCAAAGTTCTGCCTATGACAATGCAAATCCTTTTAATGAGGAAGAA TTTGAGCATAGTTCATCAGCAGCAGCATCTGCAGCTGCTATGAAGGAAGCAATGGATAAA GCTGAGGCAAAGTTCAAGCATGCGAAGGTTGTACGGGAAAGGGAACGCGATGCAAAACAT AGAAATAGAGAACAGCAGGAACAAGATGATGAAGCAAGGTTCAACACCCAGGATCATGAA GAGAGAGATAGGCAGGAAAGACTAGAACGGGAGAGAGAGATGAGACAAAGGGAGGAAAAG GAGAGAGAGCAAAGAAGACTTGAAGAGGAGAGGGAACTTGAGAAACAGAGAGAAAGAGAG AGGGCTGCTAGGCAAGCTGTGGAAAGGGCTACAAAGGAAGCACGGGAAAGAGCAGCTGCA GAAGCACGTGCAAAAGCAGAGAGGGAGGCACGCCAGCGTGCAGAGCGGGCTGCTGTTCAA AGAGCTCAAAAGGAAGCACGTGAGAGGGCTGCTGTAGACGCTAGGGAACGAGCTGAGAGG GCAGCTGCTGAAGCGAAGGAGAGGGCTGCTGCTGAAGCCAAGGAGAAGGTTGCAACTCAA GCCAGGGATAGGGCTGCAGCAGAAAGAGCTGCAGTGGAGAGAGCTCAACAAGAAGCAAGG AGGAGAGCTGAAAGAGCAGCAGTAGAGAGGGCTGCTTCTGAGGCTCGGGAACGTCAAGCT GCTGAGGCTCGAGAAAGGCAGGCTGCTGCTGCTGCTGCTGCAGCAGCTGCAGCAAAAGAA AAACAGAGTAAACCGGACGATCTTGAGTCCTTCTTTGGTATGGGAGCTCGAGCCAATAGT GCGCCGAAGCAAAGGGCTCCAACAGCGGATTCGATGTTCAATTCTCAAACTCAAAATAGA GGGGCAGCATCTTCTGCTTCAGCATCTATGCGGAAGGCATCATCAACAACAAATATTGCA GATGACCTATCTGCAATATTTGGAGGAGCTCCCACATCATCTGAAGAATTTCAAGAAATT GAAGGAGAGAGTGAAGAAAGAAGACGTGCTAGGTTCGAACGGCATCAAAGGACCCGTGAA CGAGCGGCAAAAGCCCTGGCTGAAAAGAATGAACGGGATATGCAGGTTCAAAGGGAGCAG GCTGAAAGACATAGAATTTCAGAAACAATGGACTTTGAGATTAAGCGATGGGCTGCTGGA AAAGAAGGCAATTTGCGTGCATTGCTATCAACTTTGCAATATGTACTTTGGCCAGAATGT GGATGGCAACCTGTATCCCTGACTGACTTGATTACTGCTGCTGCGGTTAAAAAGGTATAT AGAAAGGCAACATTGTGCATACATCCTGACAAGGTGCAGCAAAAGGGGGCAAATCTACAG CAGAAATATGTTGCCGAGAAGGTGTTTGATCTCCTTAAGGAGGCATGGAACAAATTCAAC TCAGAGGAACTCTTCTAA

Peptide Sequence

PEP ID	Os12t0548200-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:22173286:22180478:-1 gene:Os12g0548200 transcript:Os12t0548200-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C82 description:Hypothetical conserved gene. (Os12t0548200-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os12t0548200-02)
Sequence	MDDFQGLLARDFGLRPQGKAAPMSAARAAASSGSAWSNSRSASASSAAAATAPPAPLYDD LFGAAAPSAPPPKAAPSPSLDAIFDSFKEPSAPDAPPKPKHSSMPVFDKPVYDDDIFDGV PGVKSSSSARFDDVFGGSHAPPPPAYDDLLGGFGSKPEVKEVLPEEKRKPEPAASSAGFD DLIPGFGGRIPMRARETVGTKDKNVSMSTSKPASMASDPFDVLGTTSTSKHTSSGIFTDP LDELGRPAKSQGKKHDNTAVDSGLFEDSSTFNQVPKSEPLFTSELNDDLKDRNGSTKDRD SSPVQNFSRKNTTQKPSVENFENIFPKSQSARYSDVHVDIGASGSEKYSGNGMDDQSPRS DESEDEIWLTVSEIPLFTQPTSAPPPSRTPPPLAVKQKPHGSQAKRKDDNYPRRSNQNHN HHRSSSNQAGSSSIDELEDFAMGKSQSSAYDNANPFNEEEFEHSSSAAASAAAMKEAMDK AEAKFKHAKVVRERERDAKHRNREQQEQDDEARFNTQDHEERDRQERLEREREMRQREEK EREQRRLEEERELEKQRERERAARQAVERATKEARERAAAEARAKAEREARQRAERAAVQ RAQKEARERAAVDARERAERAAAEAKERAAAEAKEKVATQARDRAAAERAAVERAQQEAR RRAERAAVERAASEARERQAAEARERQAAAAAAAAAAAKEKQSKPDDLESFFGMGARANS APKQRAPTADSMFNSQTQNRGAASSASASMRKASSTTNIADDLSAIFGGAPTSSEEFQEI EGESEERRRARFERHQRTRERAAKALAEKNERDMQVQREQAERHRISETMDFEIKRWAAG KEGNLRALLSTLQYVLWPECGWQPVSLTDLITAAAVKKVYRKATLCIHPDKVQQKGANLQ QKYVAEKVFDLLKEAWNKFNSEELF

Transcript Sequence

Transcript ID	Os12t0548200-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22173286:22180478:-1 gene:Os12g0548200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DnaJ domain protein C82 description:Hypothetical conserved gene. (Os12t0548200-01);Heat shock protein DnaJ, N-terminal domain containing protein. (Os12t0548200-02)
Sequence	TCTCTCCCCATCTCTCTCTCTCCTCCTCGACTCACCGTCTCTCTCTCTCCCCTCCCGTCT CCGGCGATCTCTCCGGCGGCGTCTCCGGCGACCGGGCCACCGCCGCCGCCGCCAAGGAGC GCTCCCCCTCATTCCCCAGATCGGTAGCTGTCTCGTCGCCGTCCCCGATCCTCCTCCTCT TCCTTTCCCCCAGATCCACACCCCCCCCCTCGCGTACTCGCTCTTAGCCTCCGCGGCGGG AGGTGGTGGTGGTGTGGGCGGGGGGTGAGCTCGTGAGTCAGATCCGGTGATCTGTGCGCT GTTGCGGTTGCCATGGACGACTTCCAGGGCCTCCTGGCCCGCGACTTTGGGCTGCGCCCG CAGGGGAAGGCGGCGCCCATGTCGGCCGCCCGCGCCGCCGCGTCCTCCGGATCCGCCTGG TCCAACTCCAGATCCGCATCGGCGTCCTCCGCCGCCGCCGCCACCGCCCCGCCCGCGCCC TTGTACGATGACCTCTTCGGGGCCGCGGCGCCCTCCGCCCCGCCGCCCAAGGCCGCGCCC TCGCCCTCCCTCGACGCCATCTTTGACTCCTTCAAGGAGCCCTCCGCCCCGGATGCCCCA CCCAAGCCGAAGCACTCGTCCATGCCGGTGTTTGACAAGCCGGTCTACGATGACGACATC TTCGATGGGGTTCCCGGGGTGAAGAGCAGCTCCTCGGCGCGGTTTGACGATGTATTCGGT GGCAGCCACGCGCCGCCGCCACCTGCGTACGATGATCTGCTTGGGGGATTTGGGAGCAAG CCGGAGGTGAAGGAGGTGCTGCCGGAGGAGAAGAGGAAGCCTGAGCCGGCCGCTTCATCG GCTGGGTTTGATGATTTGATCCCAGGGTTTGGCGGGAGGATCCCGATGCGTGCCAGGGAG ACTGTTGGAACTAAAGATAAGAATGTGTCCATGTCAACGTCTAAGCCAGCTAGCATGGCA AGTGACCCATTTGATGTTCTTGGTACAACTTCAACCTCAAAGCATACATCTTCAGGGATA TTCACGGATCCCTTGGATGAACTGGGCAGGCCTGCAAAATCTCAAGGGAAAAAACATGAT AATACTGCTGTTGACAGTGGCCTATTCGAGGACTCAAGCACTTTTAATCAGGTCCCAAAA TCAGAACCTCTGTTTACCTCAGAGTTGAATGATGACTTGAAAGATAGGAATGGCTCCACC AAAGATCGAGATTCAAGTCCTGTGCAAAATTTTTCCAGAAAAAATACAACCCAAAAACCT TCTGTGGAGAACTTCGAAAATATCTTTCCTAAGTCACAGTCTGCTCGATATTCTGATGTT CATGTTGACATTGGTGCCTCTGGTTCAGAGAAATACAGTGGGAATGGTATGGATGACCAG TCTCCAAGATCTGATGAGTCCGAAGATGAGATCTGGCTTACAGTTTCTGAGATTCCCCTC TTCACACAGCCAACTAGTGCCCCACCACCTTCAAGAACACCACCACCTCTTGCTGTTAAG CAAAAACCACATGGATCACAAGCAAAAAGAAAAGATGACAATTATCCACGCCGGTCTAAC CAAAACCACAATCATCACAGAAGCTCGTCAAATCAAGCTGGTTCTTCTTCAATAGATGAA CTGGAAGATTTTGCCATGGGCAAGTCTCAAAGTTCTGCCTATGACAATGCAAATCCTTTT AATGAGGAAGAATTTGAGCATAGTTCATCAGCAGCAGCATCTGCAGCTGCTATGAAGGAA GCAATGGATAAAGCTGAGGCAAAGTTCAAGCATGCGAAGGTTGTACGGGAAAGGGAACGC GATGCAAAACATAGAAATAGAGAACAGCAGGAACAAGATGATGAAGCAAGGTTCAACACC CAGGATCATGAAGAGAGAGATAGGCAGGAAAGACTAGAACGGGAGAGAGAGATGAGACAA AGGGAGGAAAAGGAGAGAGAGCAAAGAAGACTTGAAGAGGAGAGGGAACTTGAGAAACAG AGAGAAAGAGAGAGGGCTGCTAGGCAAGCTGTGGAAAGGGCTACAAAGGAAGCACGGGAA AGAGCAGCTGCAGAAGCACGTGCAAAAGCAGAGAGGGAGGCACGCCAGCGTGCAGAGCGG GCTGCTGTTCAAAGAGCTCAAAAGGAAGCACGTGAGAGGGCTGCTGTAGACGCTAGGGAA CGAGCTGAGAGGGCAGCTGCTGAAGCGAAGGAGAGGGCTGCTGCTGAAGCCAAGGAGAAG GTTGCAACTCAAGCCAGGGATAGGGCTGCAGCAGAAAGAGCTGCAGTGGAGAGAGCTCAA CAAGAAGCAAGGAGGAGAGCTGAAAGAGCAGCAGTAGAGAGGGCTGCTTCTGAGGCTCGG GAACGTCAAGCTGCTGAGGCTCGAGAAAGGCAGGCTGCTGCTGCTGCTGCTGCAGCAGCT GCAGCAAAAGAAAAACAGAGTAAACCGGACGATCTTGAGTCCTTCTTTGGTATGGGAGCT CGAGCCAATAGTGCGCCGAAGCAAAGGGCTCCAACAGCGGATTCGATGTTCAATTCTCAA ACTCAAAATAGAGGGGCAGCATCTTCTGCTTCAGCATCTATGCGGAAGGCATCATCAACA ACAAATATTGCAGATGACCTATCTGCAATATTTGGAGGAGCTCCCACATCATCTGAAGAA TTTCAAGAAATTGAAGGAGAGAGTGAAGAAAGAAGACGTGCTAGGTTCGAACGGCATCAA AGGACCCGTGAACGAGCGGCAAAAGCCCTGGCTGAAAAGAATGAACGGGATATGCAGGTT CAAAGGGAGCAGGCTGAAAGACATAGAATTTCAGAAACAATGGACTTTGAGATTAAGCGA TGGGCTGCTGGAAAAGAAGGCAATTTGCGTGCATTGCTATCAACTTTGCAATATGTACTT TGGCCAGAATGTGGATGGCAACCTGTATCCCTGACTGACTTGATTACTGCTGCTGCGGTT AAAAAGGTATATAGAAAGGCAACATTGTGCATACATCCTGACAAGGTGCAGCAAAAGGGG GCAAATCTACAGCAGAAATATGTTGCCGAGAAGGTGTTTGATCTCCTTAAGGAGGCATGG AACAAATTCAACTCAGAGGAACTCTTCTAAACGGCCTGCGCAAATGAAACATATTGCTCA CCAATCTTCACCTGCATGAGGCAATCGGGGTGGGACAGCACCTCATAGAACAACCGAGCT GGAGCAGTCGGTCGGCGGACCCATGAAACGATGAAGTGAAAGTTCCACCATAATTACAAT TGTATTGTTATTACCAATATTGTTTGTTTTATTATACACCCTCATCTTCTCCCTTCTGTA TGTGTTGATTCAAATGACATTTCACAGCCACATGTGGTGGCCCTGCGGCAGACCCTCATC CAGTAGGTGTATATTAGCGTTCTTTTTGCTCGGTTGATCCAGGGTTGTGTAGCAGCGGAT TTGGGGTGGCCAGTGTTGTGGTTTTTGGATTAGGCACAGGGTTTATTTACCATGGAGGGC CCAAATTGCATGGATCATGAATGTTGCCAGTTTGATGCCATGGGCTTTTCGTAAGTTCAA TTATCTTGTTTATAGTGAACTTCTGGAACACACATTGGGGATGTTCCTCTGATTCCTGTG TGATTTTGTATAAAGTTGATCTGGAATTTTGATTTCC