Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0548100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:22163667:22169820:-1 gene:Os12g0548100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G14587-6 protein (Fragment). (Os12t0548100-01)
Sequence	ATGGACGCCGCCGACGAGATGGACATCGACGCCGCCGCCGACGAGACGGGATCCCCGCCC TCCGCCTCGGGATCCCTCTCCACCTTCCTCTCCGAGCTCGCCGCCCTCCACCGCCGCTCC TCCGGTACCTCCTCCTCCTCCTCCACCTCCACCTCCCCGCCCCTCTCCCTCGCCTCCCTC ACCTTCCTCTCCTCGGCGGCGTCCCCCTCCTCCTCCATCTTCCCCCGCCTCGCCGCCGCG GGCCTCCCGGCCTCCTCCCTCTCCGCCCCGCTCGCCGCCTCCCTCTCCTCCGCGCACCAC CCGCTCCCCGCCGCCGTCGCCTACCTCCGCCTCCTCCTCGCCCCGGCCTCCCCTCTCCTC TCCCTCTTCTCGCCGCTCCCCTTCCTCTCCCTCCTCCTCGCCCTCCGCAAGTCGGCGTCG TCGTCCGCCGCGTCGCACGATGCGGCGGCGGCGGCCAACCCTAGCTCCGGCTCCGGCTCC GGCTCCGGCTCCGGCAAGGGGAACCACCGGAACCGGAAGCGGAAGAGCCACCAGCAGCGT CAGTCGCCGGCGGCGGCCCCGTCGCTCCTCCCCAGGGCGCTCGCGCTCCTCGCCGACGCC GCGGGGAGGCTGCCGCTCGGGGAGCACCCGGACGCGCGGAGGTCGCTCGTCGACACCGCC GCGGAGCTCGCCGCCTTCGATGTCCTCGTCGCCGTCCTCGGATCTGGCTACTACGCCGAG GCGATGCCCGATTTGGTGCGCGCGCTGGCCCCCGTGGCGCTCTCAGGGTCCAGATCGGCG GCGCGGGCGTCCGCGGTGGAATTCTTGGCGAGGAAGGTTGTGCCGTTGGGTGTGGAGGGA GGGGAGGATGGGGTGAGGAAGGCGGTGGGTTACCTACCGAGGTATCTGGCGGCGAAGGCG CCGGAGAAGTCGGAGGCTAGGGCGATGGCGGTGGAGGCCATAGTCGAGGTGGTGCGAGCA ATGGGGCAATTGGAGATGGAGGGATTTGCTGGGTATGTGGTGGCTATGGCGAAGGGGAAG GCGAAAGGGCGGCTGCTTGCTGTGGATTTGATCTTGGCGATGCTGCCATTGCTGCTGCCA TCGGAAGGGGATGATTGTGGTCTACAGGAGGGTTCTTGGGGGCTGAAGTTTGTCCGGGTG CTTGTGGAGAGGTGCTCGGATACGGTGGGAGGGGTCAGGGCTCGGGCCTTGACGAACGCA GCCCAGGCGCTCGACGTTTTGTCTGAAAGAGGCATGGAGGTTGACCGGTTGCAGGAGGTG ATGAGGATAGGGAACATAGGCCTTGGCGAGTTGCTGAGGCTGCGGTGCGCTGATGATAAG GCTGCTGTGAGGAAGGCTGCGCTTGTGCTCATTACTAAGTCAATCAGATTGATCGGGAGG CCTGTTGACGAGTCGCTACTCAGTGCTATGGGGGCTGCGTGCTCTGATCCGCTAGTCAGC ATACGCAAGGCAGCTCTTGCAGCCATCTCAGAGGTGTTCAGGAACTTCCCGGATGAGAGG GTAACAAAAGAGTGGCTTCAGGCTGTGCCACCACTGGTTATTGATAGTGAGACAAGTATC CAAGAGGAATGTGAGAATTTGTTTCTTGAATTGGTCCTGAACAGGGTCTGTCAAGCTGCC AATTTGAATCTAAATGATGATTCCAATGATATGGAGGAAGTGTTTCCTAAAGGGACACTG GATTTGCTGAAAAGTATCTGTGATGGAGAGGTTGCACCATGCATAAAAAAGATATGTGCA AGCCTTGGGAAGAAGAAAAAGCTGAAACCACTGCTTGCAAGTTCATTGCAGAATATCATA ACAATATCAGAGTCCTTGTGGTTGAGAGGTTGTAAACCAATTGAGATGTGGACTGCACCA GCCGGGGCATGGTGGCTTCTTTCTGAGGTCTCATCATTTGCACCTAAATCAGTTAACTGG AAATTCCTCTCACACCACTGGAAACTCCTTGATAATGTTGGCCAAGATAAAGGCAAAGTT CGTCCTAAAGGGGAACCAAATTCTGCATTATGGGCTGTGGATCGTGTTTCACTCTTGCAA ACTATTTCAAATGTTTCCATGGAGCTGCCTGTGGAACCTGCAGCAGAACTTGCACACAGC TTGCTCACACGGATTGAAAATTTTGACATGAACCTTAGTGAGGTTGATGCTCATGTAAAA TCCCTGAAAACGTTATGCAAACGAAAAGCAAAAACAGCTAAGGAGGGCGAAACACTGATC CTGAAGTGGGTGCAGCAACTTATATGTAAAGCTGTTAACATTCTTGATGAATACATAAAG GAGACATCAGAAGCTGCTAAGGGTCCTAAATTTTTTACACCTTTGAGTGGAAAACTCAAG GGAAGAAAAGATGCATCTGCACAAAAGTCAATGTCACATGCAGTTATTGCTGTATTCACC ATTGGATCGCTGATCCTAGCTTGCCCCACTGCTAATGTGCAAGGCGTCATTCCTTCGCTG CACACAATCATAACATCTGGAAACTCTCAGCCAAGACCAAAAAATCTTGCTGGTGGGACT GTTTCTTTCAAAGAGCTAGCTCCATCTTTATATATACAGTCCTGGGATACAATGGCTAAA ATATGCCTTGTGGATGACAAACTTGCGAAAAGATATATTCCACTTTTTGTTCAGGAACTT GAGAGGAGTGATTTGGCTACCCTCCGGAATAACATCATGATTGCACTGGCAGACTTTTAT GTCCGTTATACCGCAATGGTTGACTGTTATATGTCAAAAATAACAAAATCGTTGCGTGAT CCCTGTGAGGTAGTGAGGAGGCAAACATTTATCCTACTCTCAAAGTTGCTGCAGAGGGAC TATGTAAAGTGGAGAGGTGTGCTCTTCCTTCGGTTCCTGCCATCTTTAGTTGATGAGTCA GAGAAGATAAGGCATTTGGCAGACTTCCTTTTTGGGAACATCTTGAAAGCTAAAGCGCCA CTCCTTGCATATAATAGTTTCATAGAAGCTATCTATGTCCTAAACAATTGCTTGGGTAAT GGTGCGCAAACCGAATCTCAGGGAAGGTTGGACGGAGGACCAACCCTTTTTGCAATACGA GGCACTGACGAAAGGTCGAGGTCGAAAAGAATGCACATATATGTATCTCTGCTGAAGCAA ATGGCACCAGAGCACCTTTTAGCTACGTCTGCCAAGTTATGTGCCGAGATCTTGGCAGCT GCTTGTGATGGCTTGCTCAATGTCGATGATGCCGCTGGAAGGGCTGTACTTCAGGATGCT CTACAAATACTGGCATGCAAGGAGATGCGCATCCACCCCAACATTTGCACGGACAATTCC GAGATGGATGAGGAATGCGGCGATGGCGGGTCGTCCAATGCCACTCTCCAGGCGGCGAAA GGGAGAGCCGTCACCCAGGTGGCGAAGAAGAACCTGATCCAGATCGCCATCCCGATCTTC ATCGAGCTGAAGCGCCTTCTCGAGAGCAAGAACAGCCCGCTCACCGGCTGCCTGATGGAG TGCCTGCGGACCCTGCTCAAGGACTACAAGAACGAGTTCGACGAGATACTGGTGGCGGAC AAGCAGCTGCAGAAGGAGCTCCTCTACGACATGCAGAAGCTCGACGTCGCCGGCAAGGGC AAGGCCAAGGCCGCAGCTGCTGCGGAGGCTGGGCCAAGCGGAGCCTCGCCGGCGGTGAAC GGTGGCGGCAAGAGGGCGGCGGACGGCTCGGCGAGGGCCACGGCGAGGTCGGTGCTCAAG GAGGTGAACCGGAACACGCCGACGCCGCCGCTGAACTCGATGAGCGTGCCCAAGGTGAGG TCCATGCTGGGCGTCGGCTCGCGCCGGCCCGCTGTGCTGGAGTCGGTCCGGCGGCTTGAG CCGTTTGGGTCCGACGATGAGAATTAG

Peptide Sequence

PEP ID	Os12t0548100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:22163667:22169820:-1 gene:Os12g0548100 transcript:Os12t0548100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G14587-6 protein (Fragment). (Os12t0548100-01)
Sequence	MDAADEMDIDAAADETGSPPSASGSLSTFLSELAALHRRSSGTSSSSSTSTSPPLSLASL TFLSSAASPSSSIFPRLAAAGLPASSLSAPLAASLSSAHHPLPAAVAYLRLLLAPASPLL SLFSPLPFLSLLLALRKSASSSAASHDAAAAANPSSGSGSGSGSGKGNHRNRKRKSHQQR QSPAAAPSLLPRALALLADAAGRLPLGEHPDARRSLVDTAAELAAFDVLVAVLGSGYYAE AMPDLVRALAPVALSGSRSAARASAVEFLARKVVPLGVEGGEDGVRKAVGYLPRYLAAKA PEKSEARAMAVEAIVEVVRAMGQLEMEGFAGYVVAMAKGKAKGRLLAVDLILAMLPLLLP SEGDDCGLQEGSWGLKFVRVLVERCSDTVGGVRARALTNAAQALDVLSERGMEVDRLQEV MRIGNIGLGELLRLRCADDKAAVRKAALVLITKSIRLIGRPVDESLLSAMGAACSDPLVS IRKAALAAISEVFRNFPDERVTKEWLQAVPPLVIDSETSIQEECENLFLELVLNRVCQAA NLNLNDDSNDMEEVFPKGTLDLLKSICDGEVAPCIKKICASLGKKKKLKPLLASSLQNII TISESLWLRGCKPIEMWTAPAGAWWLLSEVSSFAPKSVNWKFLSHHWKLLDNVGQDKGKV RPKGEPNSALWAVDRVSLLQTISNVSMELPVEPAAELAHSLLTRIENFDMNLSEVDAHVK SLKTLCKRKAKTAKEGETLILKWVQQLICKAVNILDEYIKETSEAAKGPKFFTPLSGKLK GRKDASAQKSMSHAVIAVFTIGSLILACPTANVQGVIPSLHTIITSGNSQPRPKNLAGGT VSFKELAPSLYIQSWDTMAKICLVDDKLAKRYIPLFVQELERSDLATLRNNIMIALADFY VRYTAMVDCYMSKITKSLRDPCEVVRRQTFILLSKLLQRDYVKWRGVLFLRFLPSLVDES EKIRHLADFLFGNILKAKAPLLAYNSFIEAIYVLNNCLGNGAQTESQGRLDGGPTLFAIR GTDERSRSKRMHIYVSLLKQMAPEHLLATSAKLCAEILAAACDGLLNVDDAAGRAVLQDA LQILACKEMRIHPNICTDNSEMDEECGDGGSSNATLQAAKGRAVTQVAKKNLIQIAIPIF IELKRLLESKNSPLTGCLMECLRTLLKDYKNEFDEILVADKQLQKELLYDMQKLDVAGKG KAKAAAAAEAGPSGASPAVNGGGKRAADGSARATARSVLKEVNRNTPTPPLNSMSVPKVR SMLGVGSRRPAVLESVRRLEPFGSDDEN

Transcript Sequence

Transcript ID	Os12t0548100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:22163667:22169820:-1 gene:Os12g0548100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to G14587-6 protein (Fragment). (Os12t0548100-01)
Sequence	ACCAACCTCTCTCCTCCCCCCCCCCCCAACTACCAAAATTTCAAATTCCCGCACTCCCTC CTCCCCCCTCGCCGCCGGCCATGGACGCCGCCGACGAGATGGACATCGACGCCGCCGCCG ACGAGACGGGATCCCCGCCCTCCGCCTCGGGATCCCTCTCCACCTTCCTCTCCGAGCTCG CCGCCCTCCACCGCCGCTCCTCCGGTACCTCCTCCTCCTCCTCCACCTCCACCTCCCCGC CCCTCTCCCTCGCCTCCCTCACCTTCCTCTCCTCGGCGGCGTCCCCCTCCTCCTCCATCT TCCCCCGCCTCGCCGCCGCGGGCCTCCCGGCCTCCTCCCTCTCCGCCCCGCTCGCCGCCT CCCTCTCCTCCGCGCACCACCCGCTCCCCGCCGCCGTCGCCTACCTCCGCCTCCTCCTCG CCCCGGCCTCCCCTCTCCTCTCCCTCTTCTCGCCGCTCCCCTTCCTCTCCCTCCTCCTCG CCCTCCGCAAGTCGGCGTCGTCGTCCGCCGCGTCGCACGATGCGGCGGCGGCGGCCAACC CTAGCTCCGGCTCCGGCTCCGGCTCCGGCTCCGGCAAGGGGAACCACCGGAACCGGAAGC GGAAGAGCCACCAGCAGCGTCAGTCGCCGGCGGCGGCCCCGTCGCTCCTCCCCAGGGCGC TCGCGCTCCTCGCCGACGCCGCGGGGAGGCTGCCGCTCGGGGAGCACCCGGACGCGCGGA GGTCGCTCGTCGACACCGCCGCGGAGCTCGCCGCCTTCGATGTCCTCGTCGCCGTCCTCG GATCTGGCTACTACGCCGAGGCGATGCCCGATTTGGTGCGCGCGCTGGCCCCCGTGGCGC TCTCAGGGTCCAGATCGGCGGCGCGGGCGTCCGCGGTGGAATTCTTGGCGAGGAAGGTTG TGCCGTTGGGTGTGGAGGGAGGGGAGGATGGGGTGAGGAAGGCGGTGGGTTACCTACCGA GGTATCTGGCGGCGAAGGCGCCGGAGAAGTCGGAGGCTAGGGCGATGGCGGTGGAGGCCA TAGTCGAGGTGGTGCGAGCAATGGGGCAATTGGAGATGGAGGGATTTGCTGGGTATGTGG TGGCTATGGCGAAGGGGAAGGCGAAAGGGCGGCTGCTTGCTGTGGATTTGATCTTGGCGA TGCTGCCATTGCTGCTGCCATCGGAAGGGGATGATTGTGGTCTACAGGAGGGTTCTTGGG GGCTGAAGTTTGTCCGGGTGCTTGTGGAGAGGTGCTCGGATACGGTGGGAGGGGTCAGGG CTCGGGCCTTGACGAACGCAGCCCAGGCGCTCGACGTTTTGTCTGAAAGAGGCATGGAGG TTGACCGGTTGCAGGAGGTGATGAGGATAGGGAACATAGGCCTTGGCGAGTTGCTGAGGC TGCGGTGCGCTGATGATAAGGCTGCTGTGAGGAAGGCTGCGCTTGTGCTCATTACTAAGT CAATCAGATTGATCGGGAGGCCTGTTGACGAGTCGCTACTCAGTGCTATGGGGGCTGCGT GCTCTGATCCGCTAGTCAGCATACGCAAGGCAGCTCTTGCAGCCATCTCAGAGGTGTTCA GGAACTTCCCGGATGAGAGGGTAACAAAAGAGTGGCTTCAGGCTGTGCCACCACTGGTTA TTGATAGTGAGACAAGTATCCAAGAGGAATGTGAGAATTTGTTTCTTGAATTGGTCCTGA ACAGGGTCTGTCAAGCTGCCAATTTGAATCTAAATGATGATTCCAATGATATGGAGGAAG TGTTTCCTAAAGGGACACTGGATTTGCTGAAAAGTATCTGTGATGGAGAGGTTGCACCAT GCATAAAAAAGATATGTGCAAGCCTTGGGAAGAAGAAAAAGCTGAAACCACTGCTTGCAA GTTCATTGCAGAATATCATAACAATATCAGAGTCCTTGTGGTTGAGAGGTTGTAAACCAA TTGAGATGTGGACTGCACCAGCCGGGGCATGGTGGCTTCTTTCTGAGGTCTCATCATTTG CACCTAAATCAGTTAACTGGAAATTCCTCTCACACCACTGGAAACTCCTTGATAATGTTG GCCAAGATAAAGGCAAAGTTCGTCCTAAAGGGGAACCAAATTCTGCATTATGGGCTGTGG ATCGTGTTTCACTCTTGCAAACTATTTCAAATGTTTCCATGGAGCTGCCTGTGGAACCTG CAGCAGAACTTGCACACAGCTTGCTCACACGGATTGAAAATTTTGACATGAACCTTAGTG AGGTTGATGCTCATGTAAAATCCCTGAAAACGTTATGCAAACGAAAAGCAAAAACAGCTA AGGAGGGCGAAACACTGATCCTGAAGTGGGTGCAGCAACTTATATGTAAAGCTGTTAACA TTCTTGATGAATACATAAAGGAGACATCAGAAGCTGCTAAGGGTCCTAAATTTTTTACAC CTTTGAGTGGAAAACTCAAGGGAAGAAAAGATGCATCTGCACAAAAGTCAATGTCACATG CAGTTATTGCTGTATTCACCATTGGATCGCTGATCCTAGCTTGCCCCACTGCTAATGTGC AAGGCGTCATTCCTTCGCTGCACACAATCATAACATCTGGAAACTCTCAGCCAAGACCAA AAAATCTTGCTGGTGGGACTGTTTCTTTCAAAGAGCTAGCTCCATCTTTATATATACAGT CCTGGGATACAATGGCTAAAATATGCCTTGTGGATGACAAACTTGCGAAAAGATATATTC CACTTTTTGTTCAGGAACTTGAGAGGAGTGATTTGGCTACCCTCCGGAATAACATCATGA TTGCACTGGCAGACTTTTATGTCCGTTATACCGCAATGGTTGACTGTTATATGTCAAAAA TAACAAAATCGTTGCGTGATCCCTGTGAGGTAGTGAGGAGGCAAACATTTATCCTACTCT CAAAGTTGCTGCAGAGGGACTATGTAAAGTGGAGAGGTGTGCTCTTCCTTCGGTTCCTGC CATCTTTAGTTGATGAGTCAGAGAAGATAAGGCATTTGGCAGACTTCCTTTTTGGGAACA TCTTGAAAGCTAAAGCGCCACTCCTTGCATATAATAGTTTCATAGAAGCTATCTATGTCC TAAACAATTGCTTGGGTAATGGTGCGCAAACCGAATCTCAGGGAAGGTTGGACGGAGGAC CAACCCTTTTTGCAATACGAGGCACTGACGAAAGGTCGAGGTCGAAAAGAATGCACATAT ATGTATCTCTGCTGAAGCAAATGGCACCAGAGCACCTTTTAGCTACGTCTGCCAAGTTAT GTGCCGAGATCTTGGCAGCTGCTTGTGATGGCTTGCTCAATGTCGATGATGCCGCTGGAA GGGCTGTACTTCAGGATGCTCTACAAATACTGGCATGCAAGGAGATGCGCATCCACCCCA ACATTTGCACGGACAATTCCGAGATGGATGAGGAATGCGGCGATGGCGGGTCGTCCAATG CCACTCTCCAGGCGGCGAAAGGGAGAGCCGTCACCCAGGTGGCGAAGAAGAACCTGATCC AGATCGCCATCCCGATCTTCATCGAGCTGAAGCGCCTTCTCGAGAGCAAGAACAGCCCGC TCACCGGCTGCCTGATGGAGTGCCTGCGGACCCTGCTCAAGGACTACAAGAACGAGTTCG ACGAGATACTGGTGGCGGACAAGCAGCTGCAGAAGGAGCTCCTCTACGACATGCAGAAGC TCGACGTCGCCGGCAAGGGCAAGGCCAAGGCCGCAGCTGCTGCGGAGGCTGGGCCAAGCG GAGCCTCGCCGGCGGTGAACGGTGGCGGCAAGAGGGCGGCGGACGGCTCGGCGAGGGCCA CGGCGAGGTCGGTGCTCAAGGAGGTGAACCGGAACACGCCGACGCCGCCGCTGAACTCGA TGAGCGTGCCCAAGGTGAGGTCCATGCTGGGCGTCGGCTCGCGCCGGCCCGCTGTGCTGG AGTCGGTCCGGCGGCTTGAGCCGTTTGGGTCCGACGATGAGAATTAGCGTGCCATATGGC AGAAGCTTTAGGTTGGCCTGATGGTCAGTATTAGGCTGTGTTTATGATGCTAACTTTGAC CGGTTTAGGAGAAAATTACAAGCTCAGTTTCTCGCTGACGGTTTTGTACATGGAGTATAT ATTTAACGCATTTTAGTGATGTTCAGAGAGATG