Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0541300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:21648123:21653555:1 gene:Os12g0541300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RESPIRATORY BURST OXIDASE HOMOLOG H description:NADPH oxidase, Respiratory burst oxidase homolog, Ethylene-induced aerenchyma formation in roots under oxygen-deficient conditions (Os12t0541300-01)
Sequence	ATGGCGAGCCGGGAGGAGAGCGGCAATGGCGGTGGCGGTGGCGCGACGCCGGCGGCGGAT TACCGGAGCTCGGACAGCCGGAGCTCGAGCCGGCGGAGCACGCGGTTCAAGGAGGACAAC GAGTACGTGGAGATCACGCTCGACGTCAAGGGCGACGACACGGTCGCCATCCAGAGCATC CGCAACGGCGCCGACATGCCCGAGGTCGCCCTCCTCGCGCGCGGCCTCGCGCAGCAGCCG CCGCCGTCCGCGGCGCCCGGCCCCGGCGGGCTCTCGTCGCGGCTCAAGGCGGTGAGGACC GAGCTGAGGCGGATCGCGTCGTGGAAGTTCCCCAGCGGCGTTCTCAGCGGCGGCGGCGGC GGCGGCGACGCGCCGGGCAACGGCAACGACCGCCGCCCTCGCCTCGACCGGAGCATGACC GGCGCCGCCCGCGCGCTGCGCGGGCTCCAGTTCCTCAACTCCAGCGCCGTCACCAATGGC TGGCCGGAGGTGGAGAAGAGGTTCGAGCGCCTCGCCGTCGACGGCTTCCTCCTCCGCTCC CGCTTCGGCCAGTGCATCGGAATGGTTGGATCCGAGGAGTTTGCGGTTCAGATCTTCGAC TCGCTTGCGCGGCGGCGAGGGATCACGGCTCAGTTGCTGACCAAGGATCAGCTCCGGGAG TTTTGGGAGCAGCTCTCTGATCCAGGATTTGATGCCAAGCTGCAGACTTTCTTTGACATG GTTGACAAGAATGCAGATGGTCAGATCACTGAAGAGGAGCTCAAAGAGGTCCTCACCCTG ACTGCCTCTGCAAACAAGCTGTCCAAGATCCTGGAGCGCGTCGACGAGTACACCGCGCTG ATCATGGAGGAGCTCGATCCCGATCAATTAGGCTACATAGATATATCAAACCTGGAGTCG CTGCTGCTGCTGCCGCCGTCGCAGGCGCCGTCGAAGCTGGTGACGCACAGCTCCAACATC AGCCAGCTGATCAGCCAGAAGCTGGTGCCGACGCACGACCGGAACCCGCTCCGGCGGGGG CTCCGGCGGCTGTCCTACTTCATGGAGGACAACTGGAAGCGGGTGTGGGTGATGGCGCTG TGGCTGGCCATCAACGCCGGCCTCTTCACCTGGAAGTTCATGGCGTACAAGCGCCACCCG ACGTTCGACGTCATGGGCTACTGCGTCTGCGTCGCCAAGGGCGGTGCCGAGACCACCAAG TTCAACATGGCCCTCATCCTCCTCCCCGTTTGCCGGAACACCATCACCTGGCTCCGTTCT CGCACCAAGCTCGGCGCCGTCATCCCCTTCAATGACAACATCAACTTCCACAAGGTGGTG GCAGGGGGAGTGGTGGTAGGGGTGGCGCTGCACGGGGTGACTCACCTGACGTGCGACTTC CCGAGGCTGCTGCACGCGAGTGATGCGGCGTACGAGCCGATGAAGAAGTACTTCGGGCAG ACACGGATCCCGGACTACTGGTGGTTCGTGCGCGGCGTAGAGGGGATCACCGGCGTGATC ATGGTGGTGCTCATGGCCATCGCCTACACGCTGGCGCACCCGTGGTTCCGCCGGAGCAAG CTTAGTGACAGCAACCCGCTGAAGCGGCTCAGCGGTTTCAATATGTTTTGGTACTCCCAC CACCTCTTCGTCATCGTCTACATCGCCTTCGTTGTCCATGGCGTCTGCCTCTACATCAAC CGGACTTGGTGGAAGCAGACGACATGGATGTACCTTGCCATCCCTATCCTGCTCTACGCC GGTGAGCGGATTTTCCGGGCTCTGAGGTCTCATGGCTTCACCACCGTAAGGATTGAGAAG GTTGCAATCTATCCTGGCAACGTGATAGCCATCCACATGACCAAGCCCCATGGGTTCAAG TACAAGAGTGGCCAGTACATCTATGTTAACTGCGGCGAGGTCTCGCCATTCGAGTGGCAC CCGTTCACCATCACCTCGGCTCCCGACGACAGCTATCTCAGCATGCATATCCGGTGCCGC GGTGACTGGACCTCGAGCTTCAGGGCCATCTTCTCTCAGATATGCAGGCCTCCGATGAAC GGCCAGAGCGGCCTCCTCCGGGCTGACTGCATGTCCATGGAGCACCATTCAAGGTTCCCC AAGCTCCTGATCGACGGGCCGTACGGCGCGCCGGCGCAGGACTACTGGAAGTACGACGTC CTCCTCCTCATCGGCCTAGGCATCGGCGCCACCCCTCTCATCAGCATCGTCAAGGACGTC CTCAACCACATCTACGACGACCCCGAGTCCGCCGCCTCGCCGCACACCACCAATGGCGGC GGCGCCGCGGCCGCGGCGAGGAGGGCGTTCATGACGAAGCGCGTCTACTTCTACTGGTGC ACGCGGGAGGAGGGCTCGTTCGAGTGGTTCCGCGGCGTGATGAACGAGGTGGCCGACCGC GACGCCGGGCGCGAGTTGATCGAGCTCCACAACCACTGCACCAGCGTGTACGAGGAGGGG GACGCGCGGTCGGCGCTGGTGACGATGCTCCAGGCGCTCCACCACGCCAAGAACGGCGTG GACGTGGTGTCCGGGACGCGGGTGCGCACCCACTTCGCGCGCCCGAGCTGGCGCGACGTG TTCAAGCGCGTCGCCGTGAACCACCAGGGGCAGCGCGTCGGCGTCTTCTTCTGCGGCGAC CAGGCGCTCACGCCGGAGCTCCGCCGCCTCGCCCAGGACTTCTCCCACAAGACCACCACC AAATTCGTCTTCCACAAGGAGAATTTCTAG

Peptide Sequence

PEP ID	Os12t0541300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:21648123:21653555:1 gene:Os12g0541300 transcript:Os12t0541300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RESPIRATORY BURST OXIDASE HOMOLOG H description:NADPH oxidase, Respiratory burst oxidase homolog, Ethylene-induced aerenchyma formation in roots under oxygen-deficient conditions (Os12t0541300-01)
Sequence	MASREESGNGGGGGATPAADYRSSDSRSSSRRSTRFKEDNEYVEITLDVKGDDTVAIQSI RNGADMPEVALLARGLAQQPPPSAAPGPGGLSSRLKAVRTELRRIASWKFPSGVLSGGGG GGDAPGNGNDRRPRLDRSMTGAARALRGLQFLNSSAVTNGWPEVEKRFERLAVDGFLLRS RFGQCIGMVGSEEFAVQIFDSLARRRGITAQLLTKDQLREFWEQLSDPGFDAKLQTFFDM VDKNADGQITEEELKEVLTLTASANKLSKILERVDEYTALIMEELDPDQLGYIDISNLES LLLLPPSQAPSKLVTHSSNISQLISQKLVPTHDRNPLRRGLRRLSYFMEDNWKRVWVMAL WLAINAGLFTWKFMAYKRHPTFDVMGYCVCVAKGGAETTKFNMALILLPVCRNTITWLRS RTKLGAVIPFNDNINFHKVVAGGVVVGVALHGVTHLTCDFPRLLHASDAAYEPMKKYFGQ TRIPDYWWFVRGVEGITGVIMVVLMAIAYTLAHPWFRRSKLSDSNPLKRLSGFNMFWYSH HLFVIVYIAFVVHGVCLYINRTWWKQTTWMYLAIPILLYAGERIFRALRSHGFTTVRIEK VAIYPGNVIAIHMTKPHGFKYKSGQYIYVNCGEVSPFEWHPFTITSAPDDSYLSMHIRCR GDWTSSFRAIFSQICRPPMNGQSGLLRADCMSMEHHSRFPKLLIDGPYGAPAQDYWKYDV LLLIGLGIGATPLISIVKDVLNHIYDDPESAASPHTTNGGGAAAAARRAFMTKRVYFYWC TREEGSFEWFRGVMNEVADRDAGRELIELHNHCTSVYEEGDARSALVTMLQALHHAKNGV DVVSGTRVRTHFARPSWRDVFKRVAVNHQGQRVGVFFCGDQALTPELRRLAQDFSHKTTT KFVFHKENF

Transcript Sequence

Transcript ID	Os12t0541300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:21648123:21653555:1 gene:Os12g0541300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RESPIRATORY BURST OXIDASE HOMOLOG H description:NADPH oxidase, Respiratory burst oxidase homolog, Ethylene-induced aerenchyma formation in roots under oxygen-deficient conditions (Os12t0541300-01)
Sequence	GTAGCACTAGTAGACAAAGCACCATCCATGACTTGAAAAGAAAATTCACCAAATTGGTTG CAAGTATTGGTTGATGGCTCTTATCTATCTAATTTGGGAATTGGACCACATCATAACATT CTTTGGCAGAGTTTGTGAAGGTACATTTGGAGTTTGGATTAATTTCAGTTAGTTGATCAT GGCGAGCCGGGAGGAGAGCGGCAATGGCGGTGGCGGTGGCGCGACGCCGGCGGCGGATTA CCGGAGCTCGGACAGCCGGAGCTCGAGCCGGCGGAGCACGCGGTTCAAGGAGGACAACGA GTACGTGGAGATCACGCTCGACGTCAAGGGCGACGACACGGTCGCCATCCAGAGCATCCG CAACGGCGCCGACATGCCCGAGGTCGCCCTCCTCGCGCGCGGCCTCGCGCAGCAGCCGCC GCCGTCCGCGGCGCCCGGCCCCGGCGGGCTCTCGTCGCGGCTCAAGGCGGTGAGGACCGA GCTGAGGCGGATCGCGTCGTGGAAGTTCCCCAGCGGCGTTCTCAGCGGCGGCGGCGGCGG CGGCGACGCGCCGGGCAACGGCAACGACCGCCGCCCTCGCCTCGACCGGAGCATGACCGG CGCCGCCCGCGCGCTGCGCGGGCTCCAGTTCCTCAACTCCAGCGCCGTCACCAATGGCTG GCCGGAGGTGGAGAAGAGGTTCGAGCGCCTCGCCGTCGACGGCTTCCTCCTCCGCTCCCG CTTCGGCCAGTGCATCGGAATGGTTGGATCCGAGGAGTTTGCGGTTCAGATCTTCGACTC GCTTGCGCGGCGGCGAGGGATCACGGCTCAGTTGCTGACCAAGGATCAGCTCCGGGAGTT TTGGGAGCAGCTCTCTGATCCAGGATTTGATGCCAAGCTGCAGACTTTCTTTGACATGGT TGACAAGAATGCAGATGGTCAGATCACTGAAGAGGAGCTCAAAGAGGTCCTCACCCTGAC TGCCTCTGCAAACAAGCTGTCCAAGATCCTGGAGCGCGTCGACGAGTACACCGCGCTGAT CATGGAGGAGCTCGATCCCGATCAATTAGGCTACATAGATATATCAAACCTGGAGTCGCT GCTGCTGCTGCCGCCGTCGCAGGCGCCGTCGAAGCTGGTGACGCACAGCTCCAACATCAG CCAGCTGATCAGCCAGAAGCTGGTGCCGACGCACGACCGGAACCCGCTCCGGCGGGGGCT CCGGCGGCTGTCCTACTTCATGGAGGACAACTGGAAGCGGGTGTGGGTGATGGCGCTGTG GCTGGCCATCAACGCCGGCCTCTTCACCTGGAAGTTCATGGCGTACAAGCGCCACCCGAC GTTCGACGTCATGGGCTACTGCGTCTGCGTCGCCAAGGGCGGTGCCGAGACCACCAAGTT CAACATGGCCCTCATCCTCCTCCCCGTTTGCCGGAACACCATCACCTGGCTCCGTTCTCG CACCAAGCTCGGCGCCGTCATCCCCTTCAATGACAACATCAACTTCCACAAGGTGGTGGC AGGGGGAGTGGTGGTAGGGGTGGCGCTGCACGGGGTGACTCACCTGACGTGCGACTTCCC GAGGCTGCTGCACGCGAGTGATGCGGCGTACGAGCCGATGAAGAAGTACTTCGGGCAGAC ACGGATCCCGGACTACTGGTGGTTCGTGCGCGGCGTAGAGGGGATCACCGGCGTGATCAT GGTGGTGCTCATGGCCATCGCCTACACGCTGGCGCACCCGTGGTTCCGCCGGAGCAAGCT TAGTGACAGCAACCCGCTGAAGCGGCTCAGCGGTTTCAATATGTTTTGGTACTCCCACCA CCTCTTCGTCATCGTCTACATCGCCTTCGTTGTCCATGGCGTCTGCCTCTACATCAACCG GACTTGGTGGAAGCAGACGACATGGATGTACCTTGCCATCCCTATCCTGCTCTACGCCGG TGAGCGGATTTTCCGGGCTCTGAGGTCTCATGGCTTCACCACCGTAAGGATTGAGAAGGT TGCAATCTATCCTGGCAACGTGATAGCCATCCACATGACCAAGCCCCATGGGTTCAAGTA CAAGAGTGGCCAGTACATCTATGTTAACTGCGGCGAGGTCTCGCCATTCGAGTGGCACCC GTTCACCATCACCTCGGCTCCCGACGACAGCTATCTCAGCATGCATATCCGGTGCCGCGG TGACTGGACCTCGAGCTTCAGGGCCATCTTCTCTCAGATATGCAGGCCTCCGATGAACGG CCAGAGCGGCCTCCTCCGGGCTGACTGCATGTCCATGGAGCACCATTCAAGGTTCCCCAA GCTCCTGATCGACGGGCCGTACGGCGCGCCGGCGCAGGACTACTGGAAGTACGACGTCCT CCTCCTCATCGGCCTAGGCATCGGCGCCACCCCTCTCATCAGCATCGTCAAGGACGTCCT CAACCACATCTACGACGACCCCGAGTCCGCCGCCTCGCCGCACACCACCAATGGCGGCGG CGCCGCGGCCGCGGCGAGGAGGGCGTTCATGACGAAGCGCGTCTACTTCTACTGGTGCAC GCGGGAGGAGGGCTCGTTCGAGTGGTTCCGCGGCGTGATGAACGAGGTGGCCGACCGCGA CGCCGGGCGCGAGTTGATCGAGCTCCACAACCACTGCACCAGCGTGTACGAGGAGGGGGA CGCGCGGTCGGCGCTGGTGACGATGCTCCAGGCGCTCCACCACGCCAAGAACGGCGTGGA CGTGGTGTCCGGGACGCGGGTGCGCACCCACTTCGCGCGCCCGAGCTGGCGCGACGTGTT CAAGCGCGTCGCCGTGAACCACCAGGGGCAGCGCGTCGGCGTCTTCTTCTGCGGCGACCA GGCGCTCACGCCGGAGCTCCGCCGCCTCGCCCAGGACTTCTCCCACAAGACCACCACCAA ATTCGTCTTCCACAAGGAGAATTTCTAGATCATCGGATTCATCGTCGTCAGCTGCCTCTC CGGCGGATAATTGAGTTCTTTCATCCTCTGAGCGAGCTCAGATTAAGTGTACAATTATAT ACAGATTAATGGTGAGAGATAGGACTACATATTTTAGTGAGTGATTGGTTGTTCGTTCGT TTGTTTTTTTTTCTCCTTCTGTGTAGGTAGAAGAATGGTAGGGGGAGTGATGATTAAGTT AGTTGATGTTTTTTTTGTTTCACAAGTTTGTACAAAATTACCAGAAAACGATGATATAAA GCTTACCAC