Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0540900-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:21625457:21629511:-1 gene:Os12g0540900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS). (Os12t0540900-01);Similar to tryptophanyl-tRNA synthetase. (Os12t0540900-02)
Sequence	ACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGGGG AAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACGAC GCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCCGC GGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGGAG AAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATCTC ATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATACAG CTAACTGATGATGAGAAGTTCTTATGGAAGAATTTGACTGTTGAGGAAACTAAAAGGCTT GCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCATT TTCTCTGATTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCAGA TGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAGGA AAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATCTC TTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTTAT TTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTGAA TCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAAAT TCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTTTGCTTTAAGCAT TGTATTTTAGTGGAAAACTACTGCAATTTTATATTTTACCTGAGGCCATTCAAATTTTGG TCTTCAATTAAGTCAAGCGTCCTGTAG

Peptide Sequence

PEP ID	Os12t0540900-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:21625457:21629511:-1 gene:Os12g0540900 transcript:Os12t0540900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS). (Os12t0540900-01);Similar to tryptophanyl-tRNA synthetase. (Os12t0540900-02)
Sequence	TNEEGEEEEQVVNPWEVSAGKGGIDYDKLVDQFGCQRLDDALVARVARLTARPPHRFLRR GLFFAHRDLNEILDLYEKGEKFYLYTGRGPSSEALHLGHLIPFMFTKYLQDAFKVPLVIQ LTDDEKFLWKNLTVEETKRLARENAKDIIACGFDVERTFIFSDFNYVGGAFYENMVKVAR CVTYNKVVGIFGFTPEDHIGKVSFPPVQAVPSFPSSFPHLFSGNDQLRCLIPCAIDQDPY FRMTRDVAPRIGYQKPSLIESRFFPALQGENTKMSASDPNSAIYVTDSAKEIKTKVCFKH CILVENYCNFIFYLRPFKFWSSIKSSVL

Transcript Sequence

Transcript ID	Os12t0540900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:21625457:21629511:-1 gene:Os12g0540900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Tryptophanyl-tRNA synthetase (EC 6.1.1.2) (Tryptophan--tRNA ligase) (TrpRS). (Os12t0540900-01);Similar to tryptophanyl-tRNA synthetase. (Os12t0540900-02)
Sequence	CCACGAACGAGGAGGGGGAGGAGGAGGAGCAGGTGGTGAACCCGTGGGAGGTGTCGGCGG GGAAAGGCGGGATCGACTACGACAAGCTCGTCGACCAGTTCGGCTGCCAGCGCCTCGACG ACGCGCTCGTCGCCCGCGTCGCCCGCCTCACCGCCCGCCCCCCTCACCGCTTCCTCCGCC GCGGCCTCTTCTTCGCCCACCGGGATTTGAACGAGATACTGGATTTGTACGAGAAGGGGG AGAAGTTCTACCTCTACACGGGGAGGGGGCCCTCGTCGGAGGCGCTGCACCTCGGCCATC TCATCCCCTTCATGTTCACCAAATATCTGCAGGATGCTTTCAAGGTGCCCCTAGTAATAC AGCTAACTGATGATGAGAAGTTCTTATGGAAGAATTTGACTGTTGAGGAAACTAAAAGGC TTGCCCGTGAAAATGCAAAAGATATCATTGCTTGTGGATTTGATGTCGAAAGGACTTTCA TTTTCTCTGATTTTAATTATGTTGGAGGTGCTTTTTATGAAAACATGGTTAAAGTTGCCA GATGTGTGACATATAATAAGGTTGTTGGAATATTTGGATTCACCCCAGAGGATCATATAG GAAAAGTCAGCTTTCCTCCTGTGCAAGCGGTTCCATCATTCCCTTCTTCATTTCCACATC TCTTCTCTGGGAATGACCAACTACGGTGCTTAATCCCATGTGCAATAGACCAGGATCCTT ATTTCAGGATGACCCGGGACGTTGCTCCAAGAATTGGTTACCAGAAACCATCATTAATTG AATCGAGATTTTTCCCTGCTCTTCAGGGGGAGAACACAAAAATGTCGGCCAGTGATCCAA ATTCTGCAATATATGTGACAGATAGTGCTAAAGAAATAAAGACAAAGGTTTGCTTTAAGC ATTGTATTTTAGTGGAAAACTACTGCAATTTTATATTTTACCTGAGGCCATTCAAATTTT GGTCTTCAATTAAGTCAAGCGTCCTGTAGCCTTATGGTTCTGCTTTTCATGGGCCTGTCA TTTATTTTACCATTTTTTCCAGGTGAACAAATATGCGTTCTCAGGTGGCCGGGACTCAAT TGAGCTCCATAGAAAACTTGGAGCTAACCTTGATGTGGATGTTCCAATCAAGTACCTGAA CTTCTTCCTTGAAGATGACAATGAGCTCGAGCACATAAAGAAGGAGTACAAGGAAGGAAG GATGCTGACGGGTGAAGTGAAGCAGCGCCTTGTTGCAGTTCTATCCGAACTGGTTGCGAG ACATCAAAGAGCTAGAGCACTAGTGACCGAGGAGATGGTCGATGTATTTATGGCGGCGAG ACCTCTTCCCAATATGTTTGGCTGAGTCTGATGTCAAAAACTGCCTGGAGATATTTGCTA CTAGCTGGATAAGATGTCCGAAGTGATCTCTAGAATTTGGAAGCAGCATTCGTGTGTTTC ATGACTTATATTTGTAGGCTGGCCACTCGTAATATTTGGTGGCACGCTTGATTTTGCAAA TCAGTTGAGGATAAATTTATTTATCTTAAAGCCTGCTCCATCAATATAGAACCAACGTCT TTTTGTATTGAATCAGAAATGTTACAACAGTTTTGAGCTTAATCAGAACAATCAAGAAAC AAACAGCTTTGTCGTC