Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0540700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:21614879:21617352:1 gene:Os12g0540700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0540700-01)
Sequence

CTGCGCGGCGCCGCGGGGCGCGTGAGGGCCCCACCCACCCCGGCGCCCCCTCGTCCTCAT
CACCTTCCGCCTGCGCCGCCGTCGCCGGCGGGCGCTGGCGGCGCGGCGGCACAGGATCGT
CTCCGTGTCTTCCAGGATGATGTCACAACACAACCAAAAGATGCCCCTGGTGTACTTAAG
GAGCGTGATCCAAGTTATGATGAGATGCTTAAGCACATGGTTGGGAGAATCACTACAAAG
CCTGGAGGAAAGCCAGAAATGGGTGAAGCTTTCGTCGTAGATCAGTACAACAGGCCACTC
CCAAGGGTTAGAACATCCAGACCTGAACCCGGGGAAGGCGGACACAGACAACTACCTCCA
GGAACCATTAGCGTCGCTCATGTCCATGAAATCATCCAACTGTACCAAGGAAAGTCCAGT
AACCACCCTGGCCCAATGAGCGTGGACAAGATTGCCTCAAAGTTCAGAGTCGAAGCCTCA
GTGGTTCAAAACATCGTGCAGTTCGTCTCACTTCCGCAGGAAGAACATGTTACCAAGAAA
GAGGAATACTGA

Peptide Sequence

PEP ID

Os12t0540700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:21614879:21617352:1 gene:Os12g0540700 transcript:Os12t0540700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0540700-01)
Sequence

LRGAAGRVRAPPTPAPPRPHHLPPAPPSPAGAGGAAAQDRLRVFQDDVTTQPKDAPGVLK
ERDPSYDEMLKHMVGRITTKPGGKPEMGEAFVVDQYNRPLPRVRTSRPEPGEGGHRQLPP
GTISVAHVHEIIQLYQGKSSNHPGPMSVDKIASKFRVEASVVQNIVQFVSLPQEEHVTKK
EEY

Transcript Sequence

Transcript ID

Os12t0540700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:21614879:21617352:1 gene:Os12g0540700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0540700-01)
Sequence

CTGCGCGGCGCCGCGGGGCGCGTGAGGGCCCCACCCACCCCGGCGCCCCCTCGTCCTCAT
CACCTTCCGCCTGCGCCGCCGTCGCCGGCGGGCGCTGGCGGCGCGGCGGCACAGGATCGT
CTCCGTGTCTTCCAGGATGATGTCACAACACAACCAAAAGATGCCCCTGGTGTACTTAAG
GAGCGTGATCCAAGTTATGATGAGATGCTTAAGCACATGGTTGGGAGAATCACTACAAAG
CCTGGAGGAAAGCCAGAAATGGGTGAAGCTTTCGTCGTAGATCAGTACAACAGGCCACTC
CCAAGGGTTAGAACATCCAGACCTGAACCCGGGGAAGGCGGACACAGACAACTACCTCCA
GGAACCATTAGCGTCGCTCATGTCCATGAAATCATCCAACTGTACCAAGGAAAGTCCAGT
AACCACCCTGGCCCAATGAGCGTGGACAAGATTGCCTCAAAGTTCAGAGTCGAAGCCTCA
GTGGTTCAAAACATCGTGCAGTTCGTCTCACTTCCGCAGGAAGAACATGTTACCAAGAAA
GAGGAATACTGAGAGTCTATAGGATATAGCGATCTTGCAGGCTGTCTAACACAATTCCTT
TGTTCATGTTTCCGAGTTTGTTCTGTGGTGGACTACTGGGAACACAATGTTTCGTAGCTT
AGGTTCTTTCTTCTTGTTGTTGCTGCTGCTGCTGAGATAGTGAGATGAGATGATGATGGA
ACTGGAAATATATATGCTGTATGAATAAAGGTGAAGGACGTGTTTTGGCCC