Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0535400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:21293012:21296897:-1 gene:Os12g0535400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to hydrolase, alpha/beta fold family protein. (Os12t0535400-01)
Sequence

TGCCAAATCCACTGGCAGGCCGTCGATCCGGCGTTTGGTCTCCCCCCGGTGGATCCGACC
GCTCAGAGCCTCGCCGGCGCCGAGGACAGCGAGCTCGCGCGGCGGCTCAGGGGCCCCGCC
GTGGCCATGGGGAAGCGCCTCAGCTTCATGAACGCGTACCTCGCCGAGGACTGCAACCCC
GTCAGGTGCTGGGTCATCACCGCCGCCGTCGCGTTCGTCACGCTCATCGTATTAGGTGTA
GGGAGTGTTGATGATACCCCAGTAGAGCTGCCAAAGAAACTCTACATAGGTCCCCCAAGT
GCCAAAACAATTCAACTTCCTGATGGAAGGCATCTGGCTTATAAAGAACAAGGAGTCACA
GCTGACAGGGCAAGATTTTCACTGATTGCTCCTCATTATTTTCTTTCGTCGAGGTTAGCA
GGAATCCCAGGAATCAAACCATCCCTCCTGGAGAAATTTGGGGCACGACTTGTGATCATT
AATTAA

Peptide Sequence

PEP ID

Os12t0535400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:21293012:21296897:-1 gene:Os12g0535400 transcript:Os12t0535400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to hydrolase, alpha/beta fold family protein. (Os12t0535400-01)
Sequence

CQIHWQAVDPAFGLPPVDPTAQSLAGAEDSELARRLRGPAVAMGKRLSFMNAYLAEDCNP
VRCWVITAAVAFVTLIVLGVGSVDDTPVELPKKLYIGPPSAKTIQLPDGRHLAYKEQGVT
ADRARFSLIAPHYFLSSRLAGIPGIKPSLLEKFGARLVIIN

Transcript Sequence

Transcript ID

Os12t0535400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:21293012:21296897:-1 gene:Os12g0535400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to hydrolase, alpha/beta fold family protein. (Os12t0535400-01)
Sequence

GCGTCGCCTCCTCGCCCTCCTCTCGCCGCCGCTGCACCGCCCCCGACTCTCTCCCCAGTC
AGGTCACTTCATCTACCAGCGAGGAGACCAGGGGCATCGAATCCGGTGACCACCTCCTCT
CCGCAGGCGATTCCGGCTGCCCGGACAAAAGGGTCGTGAGCCACCACCACCATCTTCTCC
ACCCTGCTTGGTGTAGTGCCAAATCCACTGGCAGGCCGTCGATCCGGCGTTTGGTCTCCC
CCCGGTGGATCCGACCGCTCAGAGCCTCGCCGGCGCCGAGGACAGCGAGCTCGCGCGGCG
GCTCAGGGGCCCCGCCGTGGCCATGGGGAAGCGCCTCAGCTTCATGAACGCGTACCTCGC
CGAGGACTGCAACCCCGTCAGGTGCTGGGTCATCACCGCCGCCGTCGCGTTCGTCACGCT
CATCGTATTAGGTGTAGGGAGTGTTGATGATACCCCAGTAGAGCTGCCAAAGAAACTCTA
CATAGGTCCCCCAAGTGCCAAAACAATTCAACTTCCTGATGGAAGGCATCTGGCTTATAA
AGAACAAGGAGTCACAGCTGACAGGGCAAGATTTTCACTGATTGCTCCTCATTATTTTCT
TTCGTCGAGGTTAGCAGGAATCCCAGGAATCAAACCATCCCTCCTGGAGAAATTTGGGGC
ACGACTTGTGATCATTAATTAACACTGTAAAACCAACACTATGAAAAATATGGGTAAATC
ATCTACTATCCAGGCTTTCTTATGATCTCATAGTACCTCCTCATTTTTTTTCTGTCAGCT
GTAGTGTGTACATCTGTTGTTTATGCTTGCATCATCATCTCCTCTGAGGCATCTATAGGG
TTGGCATGCCAAAAATAACTCAAACTGCTTGAGTTCATATAATTCAGTGTGCCTTCTAAA
ATTGAAGAATAACCTTTACATTTAGCTTTTGGGATAGCCAGCTAGGTAGCGCCTAGGTCC
GTGGGTGGTTTGAAATACATTCCCAAAGAAAAAGCATTTTTAGCACTACAATTTAGGTGC
CTTCATGAAAAAGTCTCATCTGATCGGTACAATCTACAGGCCTAGACTTTTAGAGAGCAT
TAATGATTTACAATTACTGCTGTCACATGTGACAATCCATTGTTTCTAGGTTCACTTTTG
CCATTTTTTATCTATGTGAGGTTCAGCAGCATGTAAGGAGCCTTGGCACTGCTATTACAG
GTGTGTTGAGTCGGATTGTATTATATCTGAATCTCACAAAAAACATTGCAGACCATCATA
TTTTAAGACATATGCAAGTATATATCATCCTATGCTCCTATGAAATATGTATCTATGGAA
TGTGGGACACTATTCTTTTTGTTGGATATAGGATAGTTTACTTACCAAATGGAAGTCAAC
TCTGTTCTAATTTAAAATTCACTGTTAATTTCATTCTTTATGAATATCACGTGGTGCTGC
GTATATGTAATGGTTCCCAATGTGTAATAATTATATTGGCAAAAGGTGATATTTGTAGAT
ATACAAAAAGTAAAGCTTAGTTAGGTGACTTCATTCTTTCAATAGATAGCTTTTCTTTTC
ATTTTCTGAATTGAGGTCATGAGGGACATGAATCTATAAATGTCTTGCCAACAGTCTACT
CTTGCTGTTATCACTTACCAGGGCACTCAGTCCTACTGTGCTACACTGCTATGAGTTCTT
CTTTTATCAGACTGCTGGCTACAAGCCATAACATTTGGGTTTAGCATTTCCATTACCTTA
TAAGCTATAACAGGATGGATATATCATATATGTATCATATACATATATATATAGGCAACA
GCTTGCCCAAACTGTTGTCTAGCATGGTAAAGGTACATTCTTAGAAATGTGCAAATGCCT
GATAATATTTGGTCATATATGTTTTGTACTGAAGGAGATAATCCACATCCTTTTTATATA
TGTATATATCAGTAAAATAAATAGTAATACTTCATACCACACCTAATGTATCTATTATTT
CTTATTTTGCAACTATATGCCTTTAGCCTTTGCAATTTGTAGATGGACGAGCTCATGAAC
ACAAATGCAAGTATGAACAGTTGGGGAGCCTCATATGTGAGATAACGACTAATCCGGAGG
ATATGTTTTTTTTCTTAGTTTTTTTATTCTTAATGTCCACATTTTGTAAGAATTCTCCAC
TAACATGCTCTGTTGTGTGATTCTCAGTTCTATCTTGTGGTCACAACACTAACTGTCAAC
TGCTCACTCCTCTCTTGGCTCCCATATTAGAACCAACACTATTTGTTGACACTTTAACAT
TTGGTGATATTTATCATGTGCACTGTTTAATTTATGAAATTTGTAAGACAATTCTATTTC
ATCAATTACTGTTTCTCCTTGCTCATTTCTAATATGTAAATGATCCAAATACATGCTATA
TAAAAAAATTATATGCTGTTAAATTTATTTCTCCTCTGATATTGGACGGGTGCAGCGAAG
CGCGCAGTTATTTCTAGTTTGTTTCAAATGCCCCGTTGCTAGATTTGCCTGGTGTATTTG
TAGAGACGCCCTTGGCCAGAGTAGAATTCCTCATGATTTTGATGACTTTTTCTGCTTGGT
TCTGGGGAAAACAGGCTTAAAAAATCTAGAGTTGGATGCCTTCTTTTAGCTGCTTTATGT
TGGAATTCTTTGGTCAACTAGACATGACATGGTCTTCAGGGATAAGATGGTTTCCTCACC
TCTAATTATTCTTTTTTCGTTTGATTGGCTTACTGTTGTAGTGGAAATCATTTCTGAAGC
CTGATGACGTTGCTACTCTGGAGTCCATGGCGGCGGCATTACAAGATGCTGTCAACGGTC
TTCGTCCCTCGCGAGCTGGAATAGGCTAACATCGGTGTTACCGGTGGTTTAGTTTTGCTT
TTGGCTTTTGCTGGCATTCTGGAGTTTGGAGCCTGGGAGCAACTACTATAATTGATGTAC
TGTCCTTAAAAGCATCATATACGATTTTCTTTTTAACACGAGTGTCACGTACGATTGAGT
GATG