Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0534100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:21238294:21239733:-1 gene:Os12g0534100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0534100-01)
Sequence

ATGTCATCTTCCACCTCCGTCCTTTCCCCTCTCCTCGCTCACGCTCATGGCCGCGCCTCT
CCCACCTCAAGGGCGCAACCTCTCATCGCTTCCCGGCTCAACCTCGCCGGATTCTCGGCC
TCCTCTCCACGACGGATTCTCCCGGCACCTCGCGCGAGCGGCGGCGGCGGCGGCGGGGAG
GAGGAGGACAGCCGCGTGCAGGAGCTGAGGGTGCCCGGTTCTTGGCTCACCCCTGCAGGA
GCAGCGCAGGAATCCGAATGGCTGAGGGAAACACTGCACAAGTGGCTCGACGACGAGTAC
TGCCCGGAGCCAGCCAATGTGGACATCAGCAACACCGCTGCGCGGTCATTCTACGAGTCC
CTGACGGCGAAAGAGTCTGACCTGGGAGAGATCTTGCTGAAGATGGTGGGAGATCTGCAG
AAGCTGTCATACAAGGAGAGCTTCCACGGCGCGTTCTCGGCTGCCAATGCCGCGGTGAGT
TTGATATCGCAGAGGATGGAGTCATCATCTGATGACTGA

Peptide Sequence

PEP ID

Os12t0534100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:21238294:21239733:-1 gene:Os12g0534100 transcript:Os12t0534100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0534100-01)
Sequence

MSSSTSVLSPLLAHAHGRASPTSRAQPLIASRLNLAGFSASSPRRILPAPRASGGGGGGE
EEDSRVQELRVPGSWLTPAGAAQESEWLRETLHKWLDDEYCPEPANVDISNTAARSFYES
LTAKESDLGEILLKMVGDLQKLSYKESFHGAFSAANAAVSLISQRMESSSDD

Transcript Sequence

Transcript ID

Os12t0534100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:21238294:21239733:-1 gene:Os12g0534100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0534100-01)
Sequence

GGGAAAAAAAATGTCATCTTCCACCTCCGTCCTTTCCCCTCTCCTCGCTCACGCTCATGG
CCGCGCCTCTCCCACCTCAAGGGCGCAACCTCTCATCGCTTCCCGGCTCAACCTCGCCGG
ATTCTCGGCCTCCTCTCCACGACGGATTCTCCCGGCACCTCGCGCGAGCGGCGGCGGCGG
CGGCGGGGAGGAGGAGGACAGCCGCGTGCAGGAGCTGAGGGTGCCCGGTTCTTGGCTCAC
CCCTGCAGGAGCAGCGCAGGAATCCGAATGGCTGAGGGAAACACTGCACAAGTGGCTCGA
CGACGAGTACTGCCCGGAGCCAGCCAATGTGGACATCAGCAACACCGCTGCGCGGTCATT
CTACGAGTCCCTGACGGCGAAAGAGTCTGACCTGGGAGAGATCTTGCTGAAGATGGTGGG
AGATCTGCAGAAGCTGTCATACAAGGAGAGCTTCCACGGCGCGTTCTCGGCTGCCAATGC
CGCGGTGAGTTTGATATCGCAGAGGATGGAGTCATCATCTGATGACTGATCATTGCCAAG
CAATTGCTAGATGGGTTTTGCTTTTGAACCATCCTAGCAGGGAATTGGCATCTCAGATCT
TTGTCTACTGAATTGAGTTCATCAGGTTTCTTTGTGTGCCTGGGCGGGCGCTTGGTTGAG
AAAATTGAAAGATGATGTGATCATGTAATTGTAACTTGTAAGTACTTGCAACAGTCACAT
GCGATTTTGAGTAAAATACGCTAATGGTTCTTAAACTT