Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0529900-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:20885447:20886410:1 gene:Os12g0529900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0529900-01)
Sequence

GCGAAAGTGGAGGAATTGAAGGTGTTGGGTGCCAAGAAGGCGGAGATGGATGCGAGGGTG
GTGTCTTTGGAGGCGGAGCTCAAAGCTGCTGTGGCTAAGAGAGGGGAATTGGAGGCTGAT
GCCGTGGCGAAGAAGGGGGAATTCGATATGGTGAAGGGCAAAAACGATAGGCTTCGTTCG
GAGGTCGCGACAGCAGTGAAGAAGCATCGCGCATCTGAGGCAGAGGTTGAGAGGCTCTGC
GCGGAATTGGGCGTGCTGACAAAGGAGAAGGAGGCAGCTGCCAAGGCGTTTGATGCTGAG
AAGGCGGGTATCATGAGGGAATTTGGGGAGCTCAAGCAGAAGGTGGAGGAAATCCAGGCC
AGCAAGGGAGCGGCCGAGGAAGCAGGGCGTGAGAAGGACGCTCAAGCTGTTAAGCTCAGA
AATGAATTGAAGGAGCTCCATGTCTCCATGTCGCAGCTCCAAGCATCCTGTGATGAGCTC
GATACGAAGCGCTCGCTCCTGAATGATGAGAAGAATTCTGTTCAGGAGGCACTGGATGCT
GAGAAGGCTGAAGCGTGCAAGCTGAAGTCGAAAATTGAGGCTATTGAGAACTGCAATGTT
GAGAAGGACGGTGAGATTGGGAAGCTGAAGGTGGCACTGATGGAAAAGAGGGAGAAGATC
GATGTTCTAATCAAGGACATCGAGCAGCTGAATCTCGAAGTGGCTGAGGCACATAGGAAG
AGGAAGGGTGGCATTTGGGCTTGGCTATATGCGGCTACGACTACCATGGTGGCTGCCATC
TCCTTCATCTATGCCACCAAGTCCCGGTGA

Peptide Sequence

PEP ID

Os12t0529900-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:20885447:20886410:1 gene:Os12g0529900 transcript:Os12t0529900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0529900-01)
Sequence

AKVEELKVLGAKKAEMDARVVSLEAELKAAVAKRGELEADAVAKKGEFDMVKGKNDRLRS
EVATAVKKHRASEAEVERLCAELGVLTKEKEAAAKAFDAEKAGIMREFGELKQKVEEIQA
SKGAAEEAGREKDAQAVKLRNELKELHVSMSQLQASCDELDTKRSLLNDEKNSVQEALDA
EKAEACKLKSKIEAIENCNVEKDGEIGKLKVALMEKREKIDVLIKDIEQLNLEVAEAHRK
RKGGIWAWLYAATTTMVAAISFIYATKSR

Transcript Sequence

Transcript ID

Os12t0529900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:20885447:20886410:1 gene:Os12g0529900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0529900-01)
Sequence

GGCGAAAGTGGAGGAATTGAAGGTGTTGGGTGCCAAGAAGGCGGAGATGGATGCGAGGGT
GGTGTCTTTGGAGGCGGAGCTCAAAGCTGCTGTGGCTAAGAGAGGGGAATTGGAGGCTGA
TGCCGTGGCGAAGAAGGGGGAATTCGATATGGTGAAGGGCAAAAACGATAGGCTTCGTTC
GGAGGTCGCGACAGCAGTGAAGAAGCATCGCGCATCTGAGGCAGAGGTTGAGAGGCTCTG
CGCGGAATTGGGCGTGCTGACAAAGGAGAAGGAGGCAGCTGCCAAGGCGTTTGATGCTGA
GAAGGCGGGTATCATGAGGGAATTTGGGGAGCTCAAGCAGAAGGTGGAGGAAATCCAGGC
CAGCAAGGGAGCGGCCGAGGAAGCAGGGCGTGAGAAGGACGCTCAAGCTGTTAAGCTCAG
AAATGAATTGAAGGAGCTCCATGTCTCCATGTCGCAGCTCCAAGCATCCTGTGATGAGCT
CGATACGAAGCGCTCGCTCCTGAATGATGAGAAGAATTCTGTTCAGGAGGCACTGGATGC
TGAGAAGGCTGAAGCGTGCAAGCTGAAGTCGAAAATTGAGGCTATTGAGAACTGCAATGT
TGAGAAGGACGGTGAGATTGGGAAGCTGAAGGTGGCACTGATGGAAAAGAGGGAGAAGAT
CGATGTTCTAATCAAGGACATCGAGCAGCTGAATCTCGAAGTGGCTGAGGCACATAGGAA
GAGGAAGGGTGGCATTTGGGCTTGGCTATATGCGGCTACGACTACCATGGTGGCTGCCAT
CTCCTTCATCTATGCCACCAAGTCCCGGTGAAGGACTTACACTTTTCTTTTTGCTATGTT
CCGTTTTCTGTTTACATGCTTATCAGTATGCAACTCGATATGATAAGGTTGCTATCTCGC
TGAATTACTCTATGATGGTGATTGGCTGCCACTATGCAATGAAGTGAAACTTTTGCTTAT
GTTC