Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0527500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:20788828:20791998:1 gene:Os12g0527500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 665 description:Cyclin-like F-box domain containing protein. (Os12t0527500-01)
Sequence	ATGGACACCGAGATCACGCAGGAGACGGCGGCGCCAGCGGCGGCGGCGGCGGACGTCGAT ATCATCAGCGACCTCACCAACGACGTGCTGCTGATAATCCTCGGCCTCTTGCCGGCGGCG AGGGACGTGGTGCGCACCTCCGCGCTGTCGACGCGGTGGCGCCACCTCTGGACCCGCGCC CCGGCGCTCCGCTTCGACGTCGGCCCGCGCAGCTGGCGGCTAGGTGGGTGTGGAGCCACC GACGAGGCCGCCGCCGCCGCCCGCCTCGTCGAGGCGGTGGACTCCGTCCTCGCCAGGCGC GAGGGCGGCGCCGACGTGAAGGACCTGGAGATCAACCTCGTCCACCACCGCTCCGATGGC GGCGACAGGCCGCCCATGTGCCACCACTACGCCGCCATGTTCGTCTCCTCCCCTTCACCT TCACGGCACCGGGAGGAGCCGCGGTGCGACCTCCTCGCCGTGCCCCTGGACGTCGTCACG CCGGCGCGCGTCGCCGCGTGGCTCCGCTTCGCCGAGCGCCGCGTCGCGGGGTCGTTCTCT CTCAGGCTGCCCGCGCTGTCGAGGAGGATCGCGGCCGCCGGATCTCCCCCCGCCGTCCTC CCTTGCTCCGAGAGGCTCCACACCATGCGCCTCGCGCTCGGCGGCGCGGCCCTCGCCGTC CCAGACGCCGTCGCTGCCGCCGCCTACCGCTCTCTTACCGACCTGCTGCTCAGCAAAGTC TCCCTCGACGACGACGGCGACGACCTCCGCCTCTGCAGCCTCCTCTCCTCCGCCAGCTGC CCTAACATGCGGAGGCTGGAGCTCAGCGACATCGACGGCCTGATCAACCTCCGCCTCGAC GCCGCCGCGACGCTCGAGGTGCTCCGCCTCATCGGCCTCCGCCACATGGAGCAGATGGAG GTGGACGCGCCGGGCCTCCGGGAGCTTGTCCTCAAGCGCATCTACGCCCACCTGATGGCG GCGGCGTCGGCGTCGTCGGTGAGGATCGCCGCGCCGGGGCTGCAGGCGCTGACGTACGAG TACGACTACGCGTGCTGGGGCGGCGCCTTCCCCATGGTGCTCGACGGCGAGCGCACCGCG AAGCTCCAGGTGCTGTCCCATGGCGTCCCCGACAAGGACAACAACGGCGCGGCGGCGTGG TTTCTGCAGCACTGCGCCGCCGCGAATCGCCTCGACGTCGTACTGAAGATGGAATTTGAT GAGGAGAAGATGGAAGAGGATATTGAGGATCTGATCAAGGATATACCAGAAGTTCTTAAT ATAACCGACTTACGAATAACGGTAGCCATCTCCACGGGAACCGTGGATACACATGCAATT GGCGCAAGCGTAACCAAGCTCATTGCAAAGTTTAGAAGAATTGAGTATCTCTCCATTGAC ATAGACAAAAAGGCCGGTGATTGTACAAATTTTGACTGCAAATGTGAGCAGCATAAAGGC TGGAGCAACGAGATGATTCCACTAGATCATCTCCGGATGGTAGACATACGTGACTTCCTA CCTTTCAATGACCAAATAGAACTCGTATGTGCACTGATTGCGAGTGCGCCGGCACTGGAG AAAATGATTGTAGCATTGCACGAGTCATATGAAGAGACAAGAGAGCGTACAAATAACATG GAGGCGTATTTATGCATTCCAAGCTGTGGTGGTCGTTGGACCCCTTGTGCTTGGAATGGG GGTAAATTTGGCAGTGCTACTAAATATGAGTGGAAACCATGTAAGCGGAAGCGGTCAGAA GAAGGGGTGGAGAAGGTTTGA

Peptide Sequence

PEP ID	Os12t0527500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:20788828:20791998:1 gene:Os12g0527500 transcript:Os12t0527500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 665 description:Cyclin-like F-box domain containing protein. (Os12t0527500-01)
Sequence	MDTEITQETAAPAAAAADVDIISDLTNDVLLIILGLLPAARDVVRTSALSTRWRHLWTRA PALRFDVGPRSWRLGGCGATDEAAAAARLVEAVDSVLARREGGADVKDLEINLVHHRSDG GDRPPMCHHYAAMFVSSPSPSRHREEPRCDLLAVPLDVVTPARVAAWLRFAERRVAGSFS LRLPALSRRIAAAGSPPAVLPCSERLHTMRLALGGAALAVPDAVAAAAYRSLTDLLLSKV SLDDDGDDLRLCSLLSSASCPNMRRLELSDIDGLINLRLDAAATLEVLRLIGLRHMEQME VDAPGLRELVLKRIYAHLMAAASASSVRIAAPGLQALTYEYDYACWGGAFPMVLDGERTA KLQVLSHGVPDKDNNGAAAWFLQHCAAANRLDVVLKMEFDEEKMEEDIEDLIKDIPEVLN ITDLRITVAISTGTVDTHAIGASVTKLIAKFRRIEYLSIDIDKKAGDCTNFDCKCEQHKG WSNEMIPLDHLRMVDIRDFLPFNDQIELVCALIASAPALEKMIVALHESYEETRERTNNM EAYLCIPSCGGRWTPCAWNGGKFGSATKYEWKPCKRKRSEEGVEKV

Transcript Sequence

Transcript ID	Os12t0527500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:20788828:20791998:1 gene:Os12g0527500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 665 description:Cyclin-like F-box domain containing protein. (Os12t0527500-01)
Sequence	ATCATTCGATCTCGAATTCCACCCGCTCCCATACTTCCATGGACACCGAGATCACGCAGG AGACGGCGGCGCCAGCGGCGGCGGCGGCGGACGTCGATATCATCAGCGACCTCACCAACG ACGTGCTGCTGATAATCCTCGGCCTCTTGCCGGCGGCGAGGGACGTGGTGCGCACCTCCG CGCTGTCGACGCGGTGGCGCCACCTCTGGACCCGCGCCCCGGCGCTCCGCTTCGACGTCG GCCCGCGCAGCTGGCGGCTAGGTGGGTGTGGAGCCACCGACGAGGCCGCCGCCGCCGCCC GCCTCGTCGAGGCGGTGGACTCCGTCCTCGCCAGGCGCGAGGGCGGCGCCGACGTGAAGG ACCTGGAGATCAACCTCGTCCACCACCGCTCCGATGGCGGCGACAGGCCGCCCATGTGCC ACCACTACGCCGCCATGTTCGTCTCCTCCCCTTCACCTTCACGGCACCGGGAGGAGCCGC GGTGCGACCTCCTCGCCGTGCCCCTGGACGTCGTCACGCCGGCGCGCGTCGCCGCGTGGC TCCGCTTCGCCGAGCGCCGCGTCGCGGGGTCGTTCTCTCTCAGGCTGCCCGCGCTGTCGA GGAGGATCGCGGCCGCCGGATCTCCCCCCGCCGTCCTCCCTTGCTCCGAGAGGCTCCACA CCATGCGCCTCGCGCTCGGCGGCGCGGCCCTCGCCGTCCCAGACGCCGTCGCTGCCGCCG CCTACCGCTCTCTTACCGACCTGCTGCTCAGCAAAGTCTCCCTCGACGACGACGGCGACG ACCTCCGCCTCTGCAGCCTCCTCTCCTCCGCCAGCTGCCCTAACATGCGGAGGCTGGAGC TCAGCGACATCGACGGCCTGATCAACCTCCGCCTCGACGCCGCCGCGACGCTCGAGGTGC TCCGCCTCATCGGCCTCCGCCACATGGAGCAGATGGAGGTGGACGCGCCGGGCCTCCGGG AGCTTGTCCTCAAGCGCATCTACGCCCACCTGATGGCGGCGGCGTCGGCGTCGTCGGTGA GGATCGCCGCGCCGGGGCTGCAGGCGCTGACGTACGAGTACGACTACGCGTGCTGGGGCG GCGCCTTCCCCATGGTGCTCGACGGCGAGCGCACCGCGAAGCTCCAGGTGCTGTCCCATG GCGTCCCCGACAAGGACAACAACGGCGCGGCGGCGTGGTTTCTGCAGCACTGCGCCGCCG CGAATCGCCTCGACGTCGTACTGAAGATGGAATTTGATGAGGAGAAGATGGAAGAGGATA TTGAGGATCTGATCAAGGATATACCAGAAGTTCTTAATATAACCGACTTACGAATAACGG TAGCCATCTCCACGGGAACCGTGGATACACATGCAATTGGCGCAAGCGTAACCAAGCTCA TTGCAAAGTTTAGAAGAATTGAGTATCTCTCCATTGACATAGACAAAAAGGCCGGTGATT GTACAAATTTTGACTGCAAATGTGAGCAGCATAAAGGCTGGAGCAACGAGATGATTCCAC TAGATCATCTCCGGATGGTAGACATACGTGACTTCCTACCTTTCAATGACCAAATAGAAC TCGTATGTGCACTGATTGCGAGTGCGCCGGCACTGGAGAAAATGATTGTAGCATTGCACG AGTCATATGAAGAGACAAGAGAGCGTACAAATAACATGGAGGCGTATTTATGCATTCCAA GCTGTGGTGGTCGTTGGACCCCTTGTGCTTGGAATGGGGGTAAATTTGGCAGTGCTACTA AATATGAGTGGAAACCATGTAAGCGGAAGCGGTCAGAAGAAGGGGTGGAGAAGGTTTGAA ATGCCTTATTACTGTTCGATATGAAATACCTTTATGAAATGTATGCATGTATCCTTGGAG TTGATCTGTTATACTCCCTCCATTTCGATATGTATGATGTTACCGACAGAGTCGACAAAC TTAATAATATAGTGATTTTACCATTTT