Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0517200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:20105748:20107750:1 gene:Os12g0517200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial ribosomal protein S10. (Os12t0517200-01)
Sequence

ATGGCCGCCAAGATACGCATAGTGATGAAATCTTTTATGAGCCAAGCTAACAAAGTTGAA
GGGGTTATTCCATACGCGCAGAAGGTTGGATTGCCTGAATCACGATCCTTGTATACCGTG
CTACGATCGCCTCACATAGACAAGAAGTCGAGGGAGCAGTTCTCGATGCATGTCAAGAAA
CAATTTCTGGTACAGAAGGCGGAGACGCACGAGCTGCAGAAGAAGCTGTTCTGGTTGAAG
CGCCTGCGCCTGCTTGGTGCTCAGTATGAACTCCAGATCAGTTTCAAGACCCGTTTGGAC
AAGAAGCTGCTCCAAGCTGCTTTGTCGTCAGGTTGCTAG

Peptide Sequence

PEP ID

Os12t0517200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:20105748:20107750:1 gene:Os12g0517200 transcript:Os12t0517200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial ribosomal protein S10. (Os12t0517200-01)
Sequence

MAAKIRIVMKSFMSQANKVEGVIPYAQKVGLPESRSLYTVLRSPHIDKKSREQFSMHVKK
QFLVQKAETHELQKKLFWLKRLRLLGAQYELQISFKTRLDKKLLQAALSSGC

Transcript Sequence

Transcript ID

Os12t0517200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:20105748:20107750:1 gene:Os12g0517200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Mitochondrial ribosomal protein S10. (Os12t0517200-01)
Sequence

GAGCGAGCAGAGGCGGCGCCGTCGCTCGTCCTCCGCCACCGCCGCCGGCGCCGATACCCA
TCCATCCCGCGCCGCGAGCGAGTGCTTCCGCCGCATCCATCCTGGTTAGCACACCCTCTT
TCCCATCTCTCTCTCTCTACTCACGCACCTACCGAATTCGCGTTAACCCTAGCTTCTGTT
CTAGAAATTTTGCCTTAACCTTAGTACTAATTTCTTCCCAAAAAGTTTTGGGGTGTCCCA
TGTTAGATCCGTCCATGAATTAAGCTGCCTGTCGAACCGGTTATTCTCTGGTATAACTCC
TGTCAATGTACTCTGCCTCAGTTCTTGATTGGGAAACCTTTCCTTGCTAGTTGCTACCTA
ATTTTCAGTTTTTCATCATTGTACTTCAGCTTGTGACTTACTGGATTAATCAGTTGGGAT
GGAGTATATGTTGGATGAACTCGTATAAATTGGTAGTATGCAAATTTTGGAGACTCATAA
TTGTGAGAGTTATCTAGCTTTATTTGTTGCCGTTCACTTGTTTCTCTAGTCAAAGATGCT
TGTCTTGAAGTTGATGATGTTAGCCTTTTTAAGATTCAATCAATGATGCTAAAGTATTTA
TTCAATATACTAATTGCAATTAGGGTTGTTCGCCCATTTACAACTGGTGTAAACGAGCTT
AGCTTAGCTGTCGCGTGCTTGCTGAAAATGAATACAGCCAGTTGTTCGGTCAAAACCTCC
GATGAACAGCCCTTATTGCAACATAGTTGTATCTGTCATAAGATTATCTTCTCTATTTTT
GTTATGCCGTGGGCTTATTGACTGAGGTTGTAATCGTGCAAAACAGGAGGACAGGGTACT
GGGTGTGGGCAGGCAGGCACTGAAACTGGACTACACTCTAGCTTCTTAGTGATTACCTCT
AGATCAGCTCAGCAAATAGATGCTATTAACCACTTTGTTTACAACTTTACATGCATGATA
ATCGTTTTTGTATCCTGAACATGAGAATTTGAAATTTGTAGTAGGTGTCAATTACTTCAC
CAAGTAAAGTAGCTGGAAACATATACTAGTAGCCATGCGGGAGTCTGGTCTTCCAAATCA
ATCAAACAATCTGTGACTGGGTATCATATTGCACATTAATATGTATGCTAAAGGTCCTAT
GTTTAAACTGTTACTAGAAGTGCTTATATTTGTTTGCCTTCCTGCTGCTCTTGTACTATA
TTCTAGATTCAAATGTACAACATCTTATTGCTCATGTAAACATTAAATACTAATTGTAAC
TGTCTAAATTTCTTCAGAGTTTTTAGTGCTTACTAAATTTCTTCAGATTTTCCGTTTGCT
GTCTAAAACTCTTAAAAGCATCATGTTTTCATGAGAAAGCTAACGTTTACAGTCTCCTGG
TGTGAAGGGCATTTGCAATCAGTGACAAAAGTTCCTCAGCTGTGGAGCCATGGCCGCCAA
GATACGCATAGTGATGAAATCTTTTATGAGCCAAGCTAACAAAGTTGAAGGGGTTATTCC
ATACGCGCAGAAGGTTGGATTGCCTGAATCACGATCCTTGTATACCGTGCTACGATCGCC
TCACATAGACAAGAAGTCGAGGGAGCAGTTCTCGATGCATGTCAAGAAACAATTTCTGGT
ACAGAAGGCGGAGACGCACGAGCTGCAGAAGAAGCTGTTCTGGTTGAAGCGCCTGCGCCT
GCTTGGTGCTCAGTATGAACTCCAGATCAGTTTCAAGACCCGTTTGGACAAGAAGCTGCT
CCAAGCTGCTTTGTCGTCAGGTTGCTAGAGCACTTCACTTACCACCATTCACCCTTGAAC
AAGACTGCTTTTGCTTCTATGATGTCTTCATGATGAGATTGTCAAACAGTACTTGCATCC
ATTAAGCATTTCATATGATGAAACTACACCATTTGGAAGAGTTTGAAGGAATGTAGTAGT
AATCCATCCAAAACGTTCAGATGCTCTGAATTATGAAGATGTGGCATGATATGAAACAGA
TATCCTTCCGTTTCCGGGCTTCT