Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0517100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:20100297:20103252:1 gene:Os12g0517100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 658 description:Cyclin-like F-box domain containing protein. (Os12t0517100-01)
Sequence	ATGGCCTCCGATGGTAGTTTCTTCCGATACGGTGAGCGCCAGATAGCAGCTAAACCTGAA GATTGCCCAGCAATGTCATCAATGTTGTCATTGGAGGATCTCCCGGATGCATTGCTCGCA GAGATTGTAAAGAGGATTACCAACACAAGTGACCTGAAGTCCATTTCCCTTGTGTCAAAG CGTCTGTACACTATCGAGGCGGAGCAAAGAAGTTCTATCCGTGTTGGCTCTGACCTTTGT CCAGCGATAGATGCCTTGTCAGCACTCTGTTCCCGATTCCCCAATTTGTTGGAAGTAGAG ATGGACTACTCTGGTTGGAAATTTCACTGGAATCTGCTAGAAAAACATATTTTCTCATTG CACTTCCCTGTCCTGCGTGATCTCACCTTATACATTGATGATATTCGTATGGGTTGTCTA GCTTCTTGCAAAAATTTGATGTCCCTCAGGTTGAACTCTGTATCAGCGATAGGCTCATGT GGACTTCTCTCGGTGGCTGTTGGTTGCAAGAATTTAACTTCTCTCCACATTATTAAGTGC AACCATATTGTTGGCAGTGATAAGTGGCTGGAGTACATTGGCAGTGCTGGGTCACTGGAA GAACTTGTAGTGAAGAACTGCAAGAGAATCAGCCAGTATGATCTCCTAAAATTTGGCCCT GGATGGATGAAGCTCAAGAAGTTCGAGTTCAAGTTCAAGAGAAGTTTCAACACATATGAA CCTCGTGACCCCTGTTATGTGGATAACTATCAGTATGGATATGATTTCTGCTGTGAAAGT TTGAGGGATGTCACTTTGGCTACGATTGTAACTAAACCAGAGATAGGACTTCGCTGTCTC CTGACAAAGTGCAAAGCATTAGAGAGACTCTGCCTTCACTATGTAATTGGCATAAGTGAT CATGACATCATTACAATCTCCCAGAACTGCAGCAACCTTAGAAGCATCTCACTTTCTCAA GAGATGCTGCTCTGTGAAATACCTGGAGGCACAGGCGTAATGGCTAGGACACCACTGACT GATGACAGCCTCAATGCTCTAGCCCTGAGATCTCATATGCTTGAAGCTGTTGAGCTTATG TTTTATGGTTGTGCTCCTGATTGGCCATCTGAGATAGCCTTCACACAGGATGGCCTTGTG ACACTCCTCCAGTCCTGTCCGATTCGTCATCTCGTGCTACGTGGTGCTAACTTCTTTGAT GATGAAGGGATGGAGGCTCTCTCATGTGCACAATTCCTGGAGACACTGGAGCTTATGCAA TGTGTTGCGGTAACTGATGTCGGGATGCGCTTTCTTGCACAAAGCCCATGTTTGAAGAAT CTCACGCTGCAGATGTGTTACGAGGTTACTGATGATGGAGTGTGTGAGGTGGCTCATGCA CGGGATTTGGAGTCTCTCACTGTTGAAAGCTGTAATCAGATTTCTGTAGAAGCTTTGCAT GGGGCCGCCAAATCCGTTCACTACAAAGTTGATTGCCCAAGCTACTACGATCGATATAAA GATTAG

Peptide Sequence

PEP ID	Os12t0517100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:20100297:20103252:1 gene:Os12g0517100 transcript:Os12t0517100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 658 description:Cyclin-like F-box domain containing protein. (Os12t0517100-01)
Sequence	MASDGSFFRYGERQIAAKPEDCPAMSSMLSLEDLPDALLAEIVKRITNTSDLKSISLVSK RLYTIEAEQRSSIRVGSDLCPAIDALSALCSRFPNLLEVEMDYSGWKFHWNLLEKHIFSL HFPVLRDLTLYIDDIRMGCLASCKNLMSLRLNSVSAIGSCGLLSVAVGCKNLTSLHIIKC NHIVGSDKWLEYIGSAGSLEELVVKNCKRISQYDLLKFGPGWMKLKKFEFKFKRSFNTYE PRDPCYVDNYQYGYDFCCESLRDVTLATIVTKPEIGLRCLLTKCKALERLCLHYVIGISD HDIITISQNCSNLRSISLSQEMLLCEIPGGTGVMARTPLTDDSLNALALRSHMLEAVELM FYGCAPDWPSEIAFTQDGLVTLLQSCPIRHLVLRGANFFDDEGMEALSCAQFLETLELMQ CVAVTDVGMRFLAQSPCLKNLTLQMCYEVTDDGVCEVAHARDLESLTVESCNQISVEALH GAAKSVHYKVDCPSYYDRYKD

Transcript Sequence

Transcript ID	Os12t0517100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:20100297:20103252:1 gene:Os12g0517100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 658 description:Cyclin-like F-box domain containing protein. (Os12t0517100-01)
Sequence	ATGGCTTCCCGGATCAATCCCCTTCTTCCTCCCGAGGCGAGGGTTTTGGCGAGGAGATCG AGCAGAGGATCTCTCTAGCCTCCCGCTCCGCCCAATCCACCGTAGCCGCGGCCCATTTCG TTGTCCGTCCAGCCGCGCGCCGCCGTGCCTTTTTCTTGGTTGCTGCGGTTCCAAGAAACC CCCGCCATGGCCTCCGATGGTAGTTTCTTCCGATACGGTGAGCGCCAGATAGCAGCTAAA CCTGAAGATTGCCCAGCAATGTCATCAATGTTGTCATTGGAGGATCTCCCGGATGCATTG CTCGCAGAGATTGTAAAGAGGATTACCAACACAAGTGACCTGAAGTCCATTTCCCTTGTG TCAAAGCGTCTGTACACTATCGAGGCGGAGCAAAGAAGTTCTATCCGTGTTGGCTCTGAC CTTTGTCCAGCGATAGATGCCTTGTCAGCACTCTGTTCCCGATTCCCCAATTTGTTGGAA GTAGAGATGGACTACTCTGGTTGGAAATTTCACTGGAATCTGCTAGAAAAACATATTTTC TCATTGCACTTCCCTGTCCTGCGTGATCTCACCTTATACATTGATGATATTCGTATGGGT TGTCTAGCTTCTTGCAAAAATTTGATGTCCCTCAGGTTGAACTCTGTATCAGCGATAGGC TCATGTGGACTTCTCTCGGTGGCTGTTGGTTGCAAGAATTTAACTTCTCTCCACATTATT AAGTGCAACCATATTGTTGGCAGTGATAAGTGGCTGGAGTACATTGGCAGTGCTGGGTCA CTGGAAGAACTTGTAGTGAAGAACTGCAAGAGAATCAGCCAGTATGATCTCCTAAAATTT GGCCCTGGATGGATGAAGCTCAAGAAGTTCGAGTTCAAGTTCAAGAGAAGTTTCAACACA TATGAACCTCGTGACCCCTGTTATGTGGATAACTATCAGTATGGATATGATTTCTGCTGT GAAAGTTTGAGGGATGTCACTTTGGCTACGATTGTAACTAAACCAGAGATAGGACTTCGC TGTCTCCTGACAAAGTGCAAAGCATTAGAGAGACTCTGCCTTCACTATGTAATTGGCATA AGTGATCATGACATCATTACAATCTCCCAGAACTGCAGCAACCTTAGAAGCATCTCACTT TCTCAAGAGATGCTGCTCTGTGAAATACCTGGAGGCACAGGCGTAATGGCTAGGACACCA CTGACTGATGACAGCCTCAATGCTCTAGCCCTGAGATCTCATATGCTTGAAGCTGTTGAG CTTATGTTTTATGGTTGTGCTCCTGATTGGCCATCTGAGATAGCCTTCACACAGGATGGC CTTGTGACACTCCTCCAGTCCTGTCCGATTCGTCATCTCGTGCTACGTGGTGCTAACTTC TTTGATGATGAAGGGATGGAGGCTCTCTCATGTGCACAATTCCTGGAGACACTGGAGCTT ATGCAATGTGTTGCGGTAACTGATGTCGGGATGCGCTTTCTTGCACAAAGCCCATGTTTG AAGAATCTCACGCTGCAGATGTGTTACGAGGTTACTGATGATGGAGTGTGTGAGGTGGCT CATGCACGGGATTTGGAGTCTCTCACTGTTGAAAGCTGTAATCAGATTTCTGTAGAAGCT TTGCATGGGGCCGCCAAATCCGTTCACTACAAAGTTGATTGCCCAAGCTACTACGATCGA TATAAAGATTAGGTACTACGTGTGATGAGTGAAAACTGGGATCATTTACTGCAACTGTGC TGTATACCATATTATATGATCTTGCCAATAACAATCTCAATTTGGCCTGTAAGCAGTACT ACTGTTTAGCTTTGGGAGTGTCTGCAACTATCAACTCTTTTGTCGACGAAGCGCTACAGA AAGGTGGAAGTGGAACTACTGCCAATCGTCTCAGACTTTCAACATTTTCCTTTTGTGTAT GCCACCTTCATTGTTATGGCTTACAAGAAACGTTTCAGGATATAATTGTGCCTACATCTT TAACAGACGATTATATGTTTCTATCACGTTTTGTTTCTGTGCCTACTCTAACCTCTGTGA ACTGATCTTTTCGCTTCCTACAAAACTGGTCCGAAAGGCATTGGATCATTGGGTGTAGTC AACAATGTACACTGCATTACCTGCTTATAGTACAATATAAGATGTTTATTC