Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0514600-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:19928513:19932818:-1 gene:Os12g0514600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os12t0514600-01)
Sequence

ATGAGCCGGGGGCGGTCGCCGGAGCCGCTGGATTTCTTCATCTGGACAGTCGAGGATGTT
GGATTATGGCTTGAAGAGATAAACCTTGGCAGCTACAGGCAAGTTTTTGAGGAAAACGGT
GTCAATGGAGAGTATCTTGAAAGCCTGTCGATGTTTACTACAGAACAGATTCTGCGGTTT
ATCAGGAGGTGCCATATGAAATGGGGAGATTTCATTACATTGTGCAAAGAGTTGAGGCGC
ATCAAAGTGGCCTGCCTGAAAGGGGAGCAAGAAGTCCGCAGGCCATGGTGGGCGCCGTCA
TGCCTATCGGTGGTGTTCGTGAGGGCGGCCAAGCGGAACCGGCAGTCCCGAGTCGTCTCC
CTGAAGCTGGAGCCCTAG

Peptide Sequence

PEP ID

Os12t0514600-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:19928513:19932818:-1 gene:Os12g0514600 transcript:Os12t0514600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os12t0514600-01)
Sequence

MSRGRSPEPLDFFIWTVEDVGLWLEEINLGSYRQVFEENGVNGEYLESLSMFTTEQILRF
IRRCHMKWGDFITLCKELRRIKVACLKGEQEVRRPWWAPSCLSVVFVRAAKRNRQSRVVS
LKLEP

Transcript Sequence

Transcript ID

Os12t0514600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:19928513:19932818:-1 gene:Os12g0514600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sterile alpha motif homology domain containing protein. (Os12t0514600-01)
Sequence

GGCTTGCATCTGTCACCCTCCCGAGCTCCCCACTCGTCTCCACCTCCCCGCGATCCCCTC
CTCCACTCCCCCCCGCGCGCTCCCATCAAGAGGAGAGAGAGTGAGAGGAGGTAGCTCTGC
CACCGGAGCGGCTGCGGGGAGCGGCGGCAGTGCTCCTCCTTCCGGGGAGATCGGGGTCGC
TGGTTGGATCCAAGAAACGGGGAGGGGGATTTGCTGGCGGGGAGGAGCCGAGTAGGGAGA
TGAGCCGGGGGCGGTCGCCGGAGCCGCTGGATTTCTTCATCTGGACAGTCGAGGATGTTG
GATTATGGCTTGAAGAGATAAACCTTGGCAGCTACAGGCAAGTTTTTGAGGAAAACGGTG
TCAATGGAGAGTATCTTGAAAGCCTGTCGATGTTTACTACAGAACAGATTCTGCGGTTTA
TCAGGAGGTGCCATATGAAATGGGGAGATTTCATTACATTGTGCAAAGAGTTGAGGCGCA
TCAAAGTGGCCTGCCTGAAAGGGGAGCAAGAAGTCCGCAGGCCATGGTGGGCGCCGTCAT
GCCTATCGGTGGTGTTCGTGAGGGCGGCCAAGCGGAACCGGCAGTCCCGAGTCGTCTCCC
TGAAGCTGGAGCCCTAGTACCCATCCACCGCCTCAAATCTTTGCGCATTCGCCGTTCTAC
CCCGCCTTCCAGCTCCTCTTGGTGGAGGCGGCACTGCAACCGCACACCGTTGGTGTGCTA
GTTCCCAGTGATATGAAAGGTCTTTTGCTGTGAAGAGCAGAAGTATGCTGCTCTACTATG
TTCAACCGGTCCTCTTATCCTTTTTTTTCTTGATCTGTTTTAATCATGATATATAGGGTT
TGGAATAGTAACCTTGGTGTAGACAAACAAGATACATATATTGTGCAGATGGTTCCCCTT
AAAAGTTTCTGCTGCTTGCAAGTC