Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0514400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:19914345:19917888:-1 gene:Os12g0514400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Potyvirus VPg interacting protein (Fragment). (Os12t0514400-01)
Sequence	ATGGGGACCTCATCGGGAGCCAACTTCCACCAGCAGCAACCGCCCCCGCCGACGTCCTCC GCCGCGGCCGCGGCAGGAGCAGCGGCGGTGGCGCAGGGGATGCTGCCGCCGCGGAGGCCC ACGGGGCTGCAGACCTCGCTGTCGCTAGCCTCCTCGGAGCAGGTCGGCTCGCCGGAGATG CAGGAGCCGGGTTCGAATTCCGACCAGGGGCACGACTCCGCCACCGAGAGCGCTAGCTCC AGGGAGACGTGGCCCGCCGAGCCCAACCACGGTAGTGCGGCCGCCGTCGTGGCCGCCTCC ACCGCCGCTAGCGGCGGCGGTGGTGTTGTTGGTGGAATTGGTGTTGGTGTGAGGATCGTG GACAAGGAGAAGGAGGTGGGGAATGGTATCCCCAAGCTGCAGGTGATCCGCGGGTCATCC CGCCTTGATCGGATGTCGCTGCGGGAGGTTGCCCGGGAGAGGGTCGATCTAGTTGCTGAG AAAATGAAGGTGATGCCGGAGGAGCACTTGGAGGACATGAAGAACGAGCTCAGGTCGATT CTGGAGGGCACGGGTGGTTCTCACCATATCGAGGAGTTCCTGTATCTCCAGAAGTTTGTG CAGAGTAGGGGCGATCTCACCCAGACCATGCTCTCGATGGCGCATCATGTGCAGCTCGAG ATCCTCGTCGCGATCAAGACTGGAATCCAGGCGTTCTTGCACCCCAGCGTTACCATTCCT CAGAACCGCCTGGTGGAGGTCTTCTTGTACAAGAGGTGCCGGAACATCGCTTGCCAGAGT GCCCTCCCTGCGGAGGAGTGTAGATGCAATGTTTGTTCTAACAGGAATGGGTTCTGTAAC CTCTGCATGTGTGTGATCTGCAACAAGTTTGATTTCGAGGTCAACACATGCCGCTGGATT GGGTGTGATTTCTGCTCTCACTGGACTCACACGGACTGCGCGATTCGTGATGGCCAGATT GGGATGGGTCAATCCATTAAGAGTGGTACTGGTCATGCTGAAATGCTTTTTAGGTGCCAG GCTTGCCAGAAAACATCGGAGCTGTTAGGTTGGGTTAAGGATGTCTTCCAACAATGTGCT CCTGGTTGGGACAGGGATGCTTTGTTACGTGAGCTTGAGTTTGTCTGCAAGATATTCCGT TTAAGTGAAGACTCAAAAGGGAGGAAGTTGTTCAGGAAATGTGCAGATCTGATTGAAAGG TTACGGAATAGCCCCGCGGATGCTATCAATCCTCGGATGATACTGCAGGTGCTCCAAGAG CTCGAGTTGGATTCCCCCAAGAGCACAGAAAATGAAGAAATAGGGCGCTTGATCACTCCT CAGGAGGCCTGTAATCGTATTGCAGAGGTTGTCCATGAAGCCGTTAAAAAGATGGAGCTT GTTGCTGAAGAGAAAATGCGACTCTACAAAAAGGCTCGCATTGCTGTGGAGGCCTGTGAC CGGGAGCTTGACGAGAAGGCCAGAGAGCTTCAGGAGCTGAAGGCCGAGAGGCTGCGCAAG AAGCAGCAGGTGGATGAGCTAGAGAGCATTGTCCGGTTGAAGCAGGCCGAGGCCGAGATG TTCCAGCTGAAGGCAAACGAGGCCCGTCAGGAGGCTGACAGGCTCCAGAGCATCGCGCTT GCCAAATCTGAGAGGGCCGAGCAGGACTACGCCAGCCTATACCTGAAGCGCCGCCTGGAG GAAGCTGAAGCAGAGAAGCAGTTCCTCTTCGAGAAAATAAAGTACCAGGAGACCCAGAGG CCCATGCAGGCGAGCGGCAGCGGCGCCGGCGATTCATCGCAGACGCCCATGCTCTCCAAG ATTCACGACCTCCTCAAGAACGTCCGCAGCATACCGCCGAAGACGGAGGGGCATCAATGA

Peptide Sequence

PEP ID	Os12t0514400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:19914345:19917888:-1 gene:Os12g0514400 transcript:Os12t0514400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Potyvirus VPg interacting protein (Fragment). (Os12t0514400-01)
Sequence	MGTSSGANFHQQQPPPPTSSAAAAAGAAAVAQGMLPPRRPTGLQTSLSLASSEQVGSPEM QEPGSNSDQGHDSATESASSRETWPAEPNHGSAAAVVAASTAASGGGGVVGGIGVGVRIV DKEKEVGNGIPKLQVIRGSSRLDRMSLREVARERVDLVAEKMKVMPEEHLEDMKNELRSI LEGTGGSHHIEEFLYLQKFVQSRGDLTQTMLSMAHHVQLEILVAIKTGIQAFLHPSVTIP QNRLVEVFLYKRCRNIACQSALPAEECRCNVCSNRNGFCNLCMCVICNKFDFEVNTCRWI GCDFCSHWTHTDCAIRDGQIGMGQSIKSGTGHAEMLFRCQACQKTSELLGWVKDVFQQCA PGWDRDALLRELEFVCKIFRLSEDSKGRKLFRKCADLIERLRNSPADAINPRMILQVLQE LELDSPKSTENEEIGRLITPQEACNRIAEVVHEAVKKMELVAEEKMRLYKKARIAVEACD RELDEKARELQELKAERLRKKQQVDELESIVRLKQAEAEMFQLKANEARQEADRLQSIAL AKSERAEQDYASLYLKRRLEEAEAEKQFLFEKIKYQETQRPMQASGSGAGDSSQTPMLSK IHDLLKNVRSIPPKTEGHQ

Transcript Sequence

Transcript ID	Os12t0514400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:19914345:19917888:-1 gene:Os12g0514400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Potyvirus VPg interacting protein (Fragment). (Os12t0514400-01)
Sequence	GGACCAACTCCGGCTACTCCCCGCCGCCGCCGCCGCCGCCGCCGTCGGCAGGAGGAGGAG GAGCTAGGTCGCCGCCCCGCCCCACATCGAGGATTAGGGTTTGCTTTGTGTTTGCCCGAC GCGAGGAGGATGGGGACCTCATCGGGAGCCAACTTCCACCAGCAGCAACCGCCCCCGCCG ACGTCCTCCGCCGCGGCCGCGGCAGGAGCAGCGGCGGTGGCGCAGGGGATGCTGCCGCCG CGGAGGCCCACGGGGCTGCAGACCTCGCTGTCGCTAGCCTCCTCGGAGCAGGTCGGCTCG CCGGAGATGCAGGAGCCGGGTTCGAATTCCGACCAGGGGCACGACTCCGCCACCGAGAGC GCTAGCTCCAGGGAGACGTGGCCCGCCGAGCCCAACCACGGTAGTGCGGCCGCCGTCGTG GCCGCCTCCACCGCCGCTAGCGGCGGCGGTGGTGTTGTTGGTGGAATTGGTGTTGGTGTG AGGATCGTGGACAAGGAGAAGGAGGTGGGGAATGGTATCCCCAAGCTGCAGGTGATCCGC GGGTCATCCCGCCTTGATCGGATGTCGCTGCGGGAGGTTGCCCGGGAGAGGGTCGATCTA GTTGCTGAGAAAATGAAGGTGATGCCGGAGGAGCACTTGGAGGACATGAAGAACGAGCTC AGGTCGATTCTGGAGGGCACGGGTGGTTCTCACCATATCGAGGAGTTCCTGTATCTCCAG AAGTTTGTGCAGAGTAGGGGCGATCTCACCCAGACCATGCTCTCGATGGCGCATCATGTG CAGCTCGAGATCCTCGTCGCGATCAAGACTGGAATCCAGGCGTTCTTGCACCCCAGCGTT ACCATTCCTCAGAACCGCCTGGTGGAGGTCTTCTTGTACAAGAGGTGCCGGAACATCGCT TGCCAGAGTGCCCTCCCTGCGGAGGAGTGTAGATGCAATGTTTGTTCTAACAGGAATGGG TTCTGTAACCTCTGCATGTGTGTGATCTGCAACAAGTTTGATTTCGAGGTCAACACATGC CGCTGGATTGGGTGTGATTTCTGCTCTCACTGGACTCACACGGACTGCGCGATTCGTGAT GGCCAGATTGGGATGGGTCAATCCATTAAGAGTGGTACTGGTCATGCTGAAATGCTTTTT AGGTGCCAGGCTTGCCAGAAAACATCGGAGCTGTTAGGTTGGGTTAAGGATGTCTTCCAA CAATGTGCTCCTGGTTGGGACAGGGATGCTTTGTTACGTGAGCTTGAGTTTGTCTGCAAG ATATTCCGTTTAAGTGAAGACTCAAAAGGGAGGAAGTTGTTCAGGAAATGTGCAGATCTG ATTGAAAGGTTACGGAATAGCCCCGCGGATGCTATCAATCCTCGGATGATACTGCAGGTG CTCCAAGAGCTCGAGTTGGATTCCCCCAAGAGCACAGAAAATGAAGAAATAGGGCGCTTG ATCACTCCTCAGGAGGCCTGTAATCGTATTGCAGAGGTTGTCCATGAAGCCGTTAAAAAG ATGGAGCTTGTTGCTGAAGAGAAAATGCGACTCTACAAAAAGGCTCGCATTGCTGTGGAG GCCTGTGACCGGGAGCTTGACGAGAAGGCCAGAGAGCTTCAGGAGCTGAAGGCCGAGAGG CTGCGCAAGAAGCAGCAGGTGGATGAGCTAGAGAGCATTGTCCGGTTGAAGCAGGCCGAG GCCGAGATGTTCCAGCTGAAGGCAAACGAGGCCCGTCAGGAGGCTGACAGGCTCCAGAGC ATCGCGCTTGCCAAATCTGAGAGGGCCGAGCAGGACTACGCCAGCCTATACCTGAAGCGC CGCCTGGAGGAAGCTGAAGCAGAGAAGCAGTTCCTCTTCGAGAAAATAAAGTACCAGGAG ACCCAGAGGCCCATGCAGGCGAGCGGCAGCGGCGCCGGCGATTCATCGCAGACGCCCATG CTCTCCAAGATTCACGACCTCCTCAAGAACGTCCGCAGCATACCGCCGAAGACGGAGGGG CATCAATGAAAACAAAGAGCAGCAGAGCTGCATACGATTCAGGTTGGTGAATCTTAGGTG TCCTTGTGCTGATGTACTCCTACGCTGATTTCCTTCGGTGTAAATTGTTAGCAAAAGTCG TTGTAACAATATTATTGGAGCTAACGGTGTGCTATCGTAGGATCCAATATATACTTAGCT TCGGTGTTTGCAGTTGAGCATGGATGAGAAATAGCTGAAGCACCCTGTACTCTGTAATAG CCAAAAAAAGAACTTCTATCATGTATGACCATTTCTGACATTGTTAGATCGAATAATTTG TATAATTTGTGTTGTAACTTCTGTACGTAACCCTGTCATTTACTATTTGGTTAAATGTG