Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0512400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:19805936:19809656:1 gene:Os12g0512400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os12t0512400-01);Conserved hypothetical protein. (Os12t0512400-02)
Sequence

ATGGTGGAAGCTGCTGCTATTGCTTTTGCCAAGAGCTCAGCCGTTTTTGTTGGGAAGAAA
GTTGCAGAGACAGTGATCAGTTATGTTGTGAACAAAGCCCTTGATCGCCTTCCGCTGGAG
AATGAGGATTTGAAGACTAAGTTGAAGAGTAAGCTCTCCAAAACTCAAGCAATGTTATAT
GGCATTACTCTGCAGGAGATCCAGGACAACCAAGGGTTGGTTGAATGGCTTTGGCAGTTC
CGCGATGCCATACAGGAGGCCGAGGATGCACTTGATGAGCTTGACTTCTTTGACTTGGAG
AAGGTGTGCAATCGGAAGGCAGAATCTTCATCATCCTTGGTCCCTAAATTCATGAGATTG
CAGCTGTCTGTAAGTTCTAATAACTCCAACAGCAGTAGAAAGAATCTCAAGAATGCTCTG
ATGAGGTTAGAATCTGTCTTTGATGATGCTGCAAATTTCCGAGTGGTAACTGGGCATGGA
CTTCACACTTCCCCTCAACGTAATGAAGGGCGCATACAAGATACGACCAACCGAAATGAG
ACAACGAGAGTGTTAGCAACACCTGTATTTGGAAGGCAGAAGGAAAAAGATGAGATAATT
GAATGGCTGGGTGTTGAGGCTCCAGGGAGAGATAGCAAACTCTCAGTGTGTGCAATAGTG
GGTGGGGGTGGTATGGGGAAAACATCTCTTGCTCAGCTTGTCTGTCAAGATAAGAAGGTT
CAGGATCATTTCGGCGACATGATTATCTGGGTGCATGTTCCCAAGCGCTTTGAACCTGTA
GTGTTGGTGGCAAGAATGTTGGAATCCATTAACAGGAACAGAGTTACTGCATCTTCTTTG
GACATACTGCAATTAGATCTCACTAAAGAGTTGGTTACTAAGAGATTTTTACTGGTTCTG
GATGATGCATGGGAGGATGGGGAAAATGAGCTATGGGGGCAATTTTTATCTCCCCTGAGG
AACATTATTGCACCAATGGGAGGTAGAATCTTGCTCACGACCCGAATGGGGTCAGTGGCT
GATGCTGTTAAACGCCAAATGCCATCAAATGAATATAAATGTGTTGTACTGGGGGGTTTA
GATCACAGAGATATTATGCAGATCTTGAACCATCATGTGCCTCCTAATGAAGATTTGGAA
CTTCGAAGTGTAGCTGAATGGATTGTACACAACCTCGAAGGATGTCCTTTTGTAGCAAAA
GTGATTGGTCAGTACCTCAGAGACAACACTGATCATAGCAATTGGAATGACTTCTTAAAT
AAAAAAAGTATGTCATTTAGACGATATTGCACCTAG

Peptide Sequence

PEP ID

Os12t0512400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:19805936:19809656:1 gene:Os12g0512400 transcript:Os12t0512400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os12t0512400-01);Conserved hypothetical protein. (Os12t0512400-02)
Sequence

MVEAAAIAFAKSSAVFVGKKVAETVISYVVNKALDRLPLENEDLKTKLKSKLSKTQAMLY
GITLQEIQDNQGLVEWLWQFRDAIQEAEDALDELDFFDLEKVCNRKAESSSSLVPKFMRL
QLSVSSNNSNSSRKNLKNALMRLESVFDDAANFRVVTGHGLHTSPQRNEGRIQDTTNRNE
TTRVLATPVFGRQKEKDEIIEWLGVEAPGRDSKLSVCAIVGGGGMGKTSLAQLVCQDKKV
QDHFGDMIIWVHVPKRFEPVVLVARMLESINRNRVTASSLDILQLDLTKELVTKRFLLVL
DDAWEDGENELWGQFLSPLRNIIAPMGGRILLTTRMGSVADAVKRQMPSNEYKCVVLGGL
DHRDIMQILNHHVPPNEDLELRSVAEWIVHNLEGCPFVAKVIGQYLRDNTDHSNWNDFLN
KKSMSFRRYCT

Transcript Sequence

Transcript ID

Os12t0512400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:19805936:19809656:1 gene:Os12g0512400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os12t0512400-01);Conserved hypothetical protein. (Os12t0512400-02)
Sequence

AGCTTCTTGGAGCCTTGACGGAATCTGGGCGTTGACCTCTAACCTCTAATCAGAGTCTAG
CCCCCAATCCTCTCCTCCTATCCAGTGTCATCTCTTGTTTGCTCAAGCTCTCTCCAGCAT
GGTGGAAGCTGCTGCTATTGCTTTTGCCAAGAGCTCAGCCGTTTTTGTTGGGAAGAAAGT
TGCAGAGACAGTGATCAGTTATGTTGTGAACAAAGCCCTTGATCGCCTTCCGCTGGAGAA
TGAGGATTTGAAGACTAAGTTGAAGAGTAAGCTCTCCAAAACTCAAGCAATGTTATATGG
CATTACTCTGCAGGAGATCCAGGACAACCAAGGGTTGGTTGAATGGCTTTGGCAGTTCCG
CGATGCCATACAGGAGGCCGAGGATGCACTTGATGAGCTTGACTTCTTTGACTTGGAGAA
GGTGTGCAATCGGAAGGCAGAATCTTCATCATCCTTGGTCCCTAAATTCATGAGATTGCA
GCTGTCTGTAAGTTCTAATAACTCCAACAGCAGTAGAAAGAATCTCAAGAATGCTCTGAT
GAGGTTAGAATCTGTCTTTGATGATGCTGCAAATTTCCGAGTGGTAACTGGGCATGGACT
TCACACTTCCCCTCAACGTAATGAAGGGCGCATACAAGATACGACCAACCGAAATGAGAC
AACGAGAGTGTTAGCAACACCTGTATTTGGAAGGCAGAAGGAAAAAGATGAGATAATTGA
ATGGCTGGGTGTTGAGGCTCCAGGGAGAGATAGCAAACTCTCAGTGTGTGCAATAGTGGG
TGGGGGTGGTATGGGGAAAACATCTCTTGCTCAGCTTGTCTGTCAAGATAAGAAGGTTCA
GGATCATTTCGGCGACATGATTATCTGGGTGCATGTTCCCAAGCGCTTTGAACCTGTAGT
GTTGGTGGCAAGAATGTTGGAATCCATTAACAGGAACAGAGTTACTGCATCTTCTTTGGA
CATACTGCAATTAGATCTCACTAAAGAGTTGGTTACTAAGAGATTTTTACTGGTTCTGGA
TGATGCATGGGAGGATGGGGAAAATGAGCTATGGGGGCAATTTTTATCTCCCCTGAGGAA
CATTATTGCACCAATGGGAGGTAGAATCTTGCTCACGACCCGAATGGGGTCAGTGGCTGA
TGCTGTTAAACGCCAAATGCCATCAAATGAATATAAATGTGTTGTACTGGGGGGTTTAGA
TCACAGAGATATTATGCAGATCTTGAACCATCATGTGCCTCCTAATGAAGATTTGGAACT
TCGAAGTGTAGCTGAATGGATTGTACACAACCTCGAAGGATGTCCTTTTGTAGCAAAAGT
GATTGGTCAGTACCTCAGAGACAACACTGATCATAGCAATTGGAATGACTTCTTAAATAA
AAAAAGTATGTCATTTAGACGATATTGCACCTAGGGTTATGGAGATGCTCAGGTTGAGCT
ATGAAGATCTAACCTCAGAGGTGCAGCTTTGCTTTCAGTACTGCAGCATATTTCCATCCC
ATTACAAATTCAGGATGGAAGAGCTTACCGAGATGTGGGTGAGTTCAGGATTGATACTGC
AAAGCACAAAGGGGAATAGTGGCCAGGAGAAAATTGCTCGGGAACACTTCAATAGTGGCT
CGGGAACATTGGGGGACCTGACGGTGATGGATTGCCTCCTTTCTTGGTTACCTTAGTTGT
AAAAGACTGTCTAGATCTGTTGAATCTACCTCATCTACCTTATAGTCTAAAGCATTTGGG
GATAAATAAAGTTGGAATACCTTGTCTGCCAGCCAGTAATCATATGGCATTACAAAACGT
TTCTACAGTTGATCCACAGCTGTGCAGTCTTCATGTAGATTCTTGTCCTAATTTGTGTTC
CTTCGGATCATGTATCGTAGAAGAGCAACACTACAAAGCTCTTACTAGCTTGAAAGTCGT
CGGCTGCAGCATGCTCTAGAAGCTCCCAAGTGAAGAACATTTTAGAAGAATATCCACAAT
GGAGAGTATTGAAATCCTTCAATGTCAGAGTTTGTCGACCTTGGGTGGCCTAGGAGCACT
TGCTTCCTTGAAAATACTGAAAATACAGCAGTGCACTCATCTAACTGCTACATCTTCAGG
TATTCCGGTAGCACCAGCTATGCAGTCTTCTCTTGTGCTTGACACCCTTGAAATTGATAA
CCATCTTTTGCTTCTTCAAAATCCATTTAGAAACTTCTGCCTCACTAGAAGACTTGTATC
TAATGGATCTGAAATGCTTGAGTTGCCTCAGGAATGGTTATTGCAGAATAGTTCTCAGTT
GGAACATATAGAAATAAACAATGCAAATCTGCTCAGATCACTGCCTTCAACTATGGACAC
TCTGCACTCCCTGAGGAGTCTGGTTCTGTGTAATGCTCCCCTCCTCGAGACACTTCCTGC
TATGCCCCCCAATCTGTGGGCTCTTCAAATAAGTGGTTGTTGCACTCGTTTAAAGGTGGG
GTGTAAAACCAATGGTTCTGAATGGGAGAAGATTTTGCCAATCCATAAAGTTGATATAAA
CTAACATGTTATTAGGCAAGAGAATATTCCATCTCACCCCTAGAAGAGAAGATGGTTCCC
AACTCTAGTGGCCTTATTTGGCAGGCTGGGGTTAGGCAAAAATCCAGGCCCTTTCCCTAG
CCATGAAGAGGAAAACAATCCACGAGTGAGGGCGTTCTCGAATTTCAGAACTTTTGATGC
ATGCTGTGCGCCCTATCAAAGATTTGATATTACATTAATATTATAAAGCCATCATTTTAA
CTCTATACTGAGCAATTAAACTCAAGTGAGCGATTTTATTTTATTAAAACTAGGAAGGTA
GCCCGCGCATTCGCGCGGGCATGCATATTAGATTGCGTTAGAAACTTATAAGAACAGAAT
ACCAACTGGATTGTTTGTGTTGTAGGTCAAAAGTATGATTTCCAAAAACATTCTTCATGA
AGCGTCGCGGTTGGCACCTCGCCTCCATTTGTCATCTTTGCTCTAGGGAGGAAGTTCTTC
ATGAAGCGTCGCGGTTGGCACCTCGCCTCCATTTGTCATCTTTGCTCTAGGGAGGAAGTT
CTTCATGAAGCGTCGCGGTTGGCACCTCGCCTCCATTTGTCATCTTTACTCTAGGGAGGA
AGAGACTTTGCTCACATCTTTCAAGGTTGTTCTTACACACAAGAAGTGTGGAGTAGTATC
AGAGGGTGGTTAGGGCTTCGTTGCTCAACGCCGATGGAGAGTCTTCCCTCTTGGTGGTGT
GATGCTCGCAAAGCAATCAAGAAGCGGGACAGGAGAGCTTTTGATGAGAGCTTTTGATGC
GGGCATCATCTTGGTGACATGGCTAATTTGGAAACAGCGCAATGCTCGTGTCTTTGAGGG
GCATGCAGTGTTGTCGGTGAATCTTTGTGCCGCAATCGAGGATGAGTGGAAATCGTGGCA
AGAAGCGGGCTTGACTTCCTCTCTTTGAGTTGTAAAGTGGAGGCGTGGGTTTTCCCTCGC
CGTTGTTGTATACATAAGGATTGTTTTATTTTGTAGTCTGTGGTTGCACGTCGTTTTCTT
GGGTGTGCTAGGTGATCTGTAAATTCTTTCCCCCCTCTTAATATACTCCGATCGGTTGTT
TTC