Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0512100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:19788367:19791483:-1 gene:Os12g0512100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os12t0512100-01)
Sequence

ATGAAGAATGACGACGACGTCGAGTCGCCGCTCCTCGCCGCCGCCGCCGACGCCGACCAC
CACGACGTCGACAACAGCCACCCCGCCGCCGGCTCCTCCTTCGCCCTCGCCTGCGCCGTC
GCCGCCTCCCTCACCTCCATCATCTACGGCTACAATCGGGGCGTGATGAGCGGGGCGCAG
AAGTTCGTGCAGCTGGACCTGGGCGTGAGCGACGCGGAGATCGAGGTGCTCATCGGGGCG
ACGAGCATCTACTCCCTCGTCGGCTCGCTGGCGGCGGGGTGGGCGTGCGACCGCGCGGGG
CGCCGCCGCACCATCGCGCTGTCGGCGGCCATGTTCCTCGCCGGCTCCGCCGCCACCGCC
GCGGCGAGCGGCTACGCCGCGCTCATGGCCGGCCAGCTCGTCGCCGGCGTCGCCTGCGGG
TTCGGCCTCGTCGTGGCGCCCGTCTACATCGCCGAGATCGCGCCGCCGTCGTCGCGCGGC
TTCCTCGCCTCCATCCCCGAGATCGCCGGCAACTCCGGCATCCTGCTGAGCTACATCGCC
GACTTCGCGCTCGCCGGCCTCCCCATGTCGCTCAACTGGCGCCTCATGATCGGCATCGGC
GCCGTCCCGCCGCTCTTCCTCGCCGCCGCCGCGCTGCTCGCCATGCCGGAGACGCCGCGC
TGGCTCGTCCTGCACGGCCACCACGACGACGCGCGCCAGGTGCTCGTCCGCACCACCGGC
GGCGACGCCGCCCTCGCCGAGCGCCGCCTCCAGGAGATCGTGTCGTCCGTCAAGGAGAGC
GCGACGAAGCAGCAGCTGTCCTCCGCCGCCGCCGCCGGCGGCGGCGGTGCGTCAACGGGC
GTGTGGCGCGACATCCTGGTCCGGCCGACGCCGGCGGTGCGGCGCGTGCTGTTCGCCATC
CTCGGCCTGCAGTTCTTCCAGCAGGCGTCGGGCGTGGCGGCGATGGTGCTGTACGCGCCG
CGGGTGTTCAACCACGTCGGCGTGACGTCGGAGCGCGCGGTGCTCGGCGCCACCGTCCTC
CTCGGCGCCACCAAGACCGCCTCCATCGTCGTGCCGCTCTTCCTCGCCGACCGCCTCGGC
CGCCGCCCGATGCTGCTCTCCAGCGCGGGCGGCATGGCCGTGTCGCTCCTCGTCCTCGGC
TTCTCCCTGCGCGTGTCGTCGTCTTCCGGCTCCGGCTCCGAGTGGTGGGCGGCGGCGACG
AGCGTGGCGGCGGCGGCGGCGTTCATGGCGACGTTCTCGCTGGGGTTCGGGCCGGTGATA
TGGATGTACGGGTCGGAGATCCTGCCGCTGCGGCTGCGGGCGCAGGGCACGGGAATCGGG
ACGGCGGCGAACCGGGTGATGAGCGCGGCGGTGGGGATGAGCTTCATCTCGCTGTACGAG
GCGGCGGGCATGGCCGGCACGTTCTACCTCTTCGCGGCGTGCTCCGCGGCGGCGTGGGTG
TTCGTCTACGCCTGCCTCCCGGAGACCAAGGGGAGGAGCCTCGAGGAGATGGAGGCGCTC
TTCGACGCCGCCCACCCATCCTCGCCGCCGCCGGCGTCGTGA

Peptide Sequence

PEP ID

Os12t0512100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:19788367:19791483:-1 gene:Os12g0512100 transcript:Os12t0512100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os12t0512100-01)
Sequence

MKNDDDVESPLLAAAADADHHDVDNSHPAAGSSFALACAVAASLTSIIYGYNRGVMSGAQ
KFVQLDLGVSDAEIEVLIGATSIYSLVGSLAAGWACDRAGRRRTIALSAAMFLAGSAATA
AASGYAALMAGQLVAGVACGFGLVVAPVYIAEIAPPSSRGFLASIPEIAGNSGILLSYIA
DFALAGLPMSLNWRLMIGIGAVPPLFLAAAALLAMPETPRWLVLHGHHDDARQVLVRTTG
GDAALAERRLQEIVSSVKESATKQQLSSAAAAGGGGASTGVWRDILVRPTPAVRRVLFAI
LGLQFFQQASGVAAMVLYAPRVFNHVGVTSERAVLGATVLLGATKTASIVVPLFLADRLG
RRPMLLSSAGGMAVSLLVLGFSLRVSSSSGSGSEWWAAATSVAAAAAFMATFSLGFGPVI
WMYGSEILPLRLRAQGTGIGTAANRVMSAAVGMSFISLYEAAGMAGTFYLFAACSAAAWV
FVYACLPETKGRSLEEMEALFDAAHPSSPPPAS

Transcript Sequence

Transcript ID

Os12t0512100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:19788367:19791483:-1 gene:Os12g0512100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Sugar/inositol transporter domain containing protein. (Os12t0512100-01)
Sequence

AGAGGTCCACGTTTCCTCGCCGCGCCGCGCCACGCCACGCCACGCCGCGCGCTCTCCTCG
CCTCGCCCTCGCGTGTCGCGCGCTCTCCTCGCCTCGCCCTCGCGTGTCGCGCGCTCGCTT
CATAAGCACCACCACCCCCCAGCCGCGCTCGCCGGCGCGCGCCCACCTAGCTTCACCAAC
CCACCCAGCCATGAAGAATGACGACGACGTCGAGTCGCCGCTCCTCGCCGCCGCCGCCGA
CGCCGACCACCACGACGTCGACAACAGCCACCCCGCCGCCGGCTCCTCCTTCGCCCTCGC
CTGCGCCGTCGCCGCCTCCCTCACCTCCATCATCTACGGCTACAATCGGGGCGTGATGAG
CGGGGCGCAGAAGTTCGTGCAGCTGGACCTGGGCGTGAGCGACGCGGAGATCGAGGTGCT
CATCGGGGCGACGAGCATCTACTCCCTCGTCGGCTCGCTGGCGGCGGGGTGGGCGTGCGA
CCGCGCGGGGCGCCGCCGCACCATCGCGCTGTCGGCGGCCATGTTCCTCGCCGGCTCCGC
CGCCACCGCCGCGGCGAGCGGCTACGCCGCGCTCATGGCCGGCCAGCTCGTCGCCGGCGT
CGCCTGCGGGTTCGGCCTCGTCGTGGCGCCCGTCTACATCGCCGAGATCGCGCCGCCGTC
GTCGCGCGGCTTCCTCGCCTCCATCCCCGAGATCGCCGGCAACTCCGGCATCCTGCTGAG
CTACATCGCCGACTTCGCGCTCGCCGGCCTCCCCATGTCGCTCAACTGGCGCCTCATGAT
CGGCATCGGCGCCGTCCCGCCGCTCTTCCTCGCCGCCGCCGCGCTGCTCGCCATGCCGGA
GACGCCGCGCTGGCTCGTCCTGCACGGCCACCACGACGACGCGCGCCAGGTGCTCGTCCG
CACCACCGGCGGCGACGCCGCCCTCGCCGAGCGCCGCCTCCAGGAGATCGTGTCGTCCGT
CAAGGAGAGCGCGACGAAGCAGCAGCTGTCCTCCGCCGCCGCCGCCGGCGGCGGCGGTGC
GTCAACGGGCGTGTGGCGCGACATCCTGGTCCGGCCGACGCCGGCGGTGCGGCGCGTGCT
GTTCGCCATCCTCGGCCTGCAGTTCTTCCAGCAGGCGTCGGGCGTGGCGGCGATGGTGCT
GTACGCGCCGCGGGTGTTCAACCACGTCGGCGTGACGTCGGAGCGCGCGGTGCTCGGCGC
CACCGTCCTCCTCGGCGCCACCAAGACCGCCTCCATCGTCGTGCCGCTCTTCCTCGCCGA
CCGCCTCGGCCGCCGCCCGATGCTGCTCTCCAGCGCGGGCGGCATGGCCGTGTCGCTCCT
CGTCCTCGGCTTCTCCCTGCGCGTGTCGTCGTCTTCCGGCTCCGGCTCCGAGTGGTGGGC
GGCGGCGACGAGCGTGGCGGCGGCGGCGGCGTTCATGGCGACGTTCTCGCTGGGGTTCGG
GCCGGTGATATGGATGTACGGGTCGGAGATCCTGCCGCTGCGGCTGCGGGCGCAGGGCAC
GGGAATCGGGACGGCGGCGAACCGGGTGATGAGCGCGGCGGTGGGGATGAGCTTCATCTC
GCTGTACGAGGCGGCGGGCATGGCCGGCACGTTCTACCTCTTCGCGGCGTGCTCCGCGGC
GGCGTGGGTGTTCGTCTACGCCTGCCTCCCGGAGACCAAGGGGAGGAGCCTCGAGGAGAT
GGAGGCGCTCTTCGACGCCGCCCACCCATCCTCGCCGCCGCCGGCGTCGTGATCGATCAC
GCGCGCGCGGGAAGACGAGGTTTTGTGTGGTCGTCGCCCTCCTCGCCGGCGACGGCGCCG
CCGGCGTCGTCGTGATCGGGAAAAAGGTTGTAAAATGTGGGATAGGGTGTGGTAAATTGG
TAATTAATTAAGGAATGCAGTAAGCAGGATGGGTAAATGTTAATTTGTTGGTGTGTAATA
TAATTTTTATGGCAAGGTCACCACC