Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0511900-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:19754488:19757913:-1 gene:Os12g0511900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os12t0511900-00)
Sequence	ATGGTGGAAGCTGCTGCTATTGCTTTTGCCAAGAGCTCAGCCATTTTTGTTGGGAAGAAA GTTGCAGAGACAGTGATCAGTTATGTTGTGAACAAAGCCCTTGATCGCCTTCCGCTGGAG AATGAGGATTTGAAGACTAAGTTGAAGAGTAAGCTCTCCAAAACTCAAGCAATGTTATAT GGCATTACTCTGCAGGAGATCCAGGACAACCAAGGGTTGGTTGAATGGCTTTGGCAGTTC CGCGATGCCATACAGGAGGCCGAGGATGCACTTGATGAGCTTGACTTCTTTGACTTGGAG AAGGTGTGCAATCGGAAGGCAGAATCTTCATCATCCTTGGTCCCTAAATTCATGAGATTG CAGCTGTCTGTAAGTTCTAATAACTCCAACAGCAGTAGAAAGAATCTCAAGAATGCTCTG ATGAGGTTAGAATCTGTCTTTGATGATGCTGCAAATTTCCGAGTGGTAACTGGGCATGGA CTTCACACTTCCCCTCAACGTAATGAAGGGCGCATACAAGATACGACCAACCGAAATGAG ACAACGAGAGTGTTAGCAACACCTGTATTTGGAAGGCAGAAGGAAAAAGATGAGATAATT GAATGGCTGGGTGTTGAGGCTCCAGGGAGAGATAGCAAACTCTCAGTGTGTGCAATAGTG GGTGGGGGTGGTATGGGGAAAACATCTCTTGCTCAGCTTGTCTGTCAAGATAAGAAGGTT CAGGATCATTTCGGCGACATGATTATCTGGGTGCATGTTCCCAAGCGCTTTGAACCTGTA GTGTTGGTGGCAAGAATGTTGGAATCCATTAACAGGAACAGAGTTACTGCATCTTCTTTG GACATACTGCAATTAGATCTCACTAAAGAGTTGGTTACTAAGAGATTTTTACTGGTTCTG GATGATGCATGGGAGGATGGGGAAAATGAGCTATGGGGGCAATTTTTATCTCCCCTGAGG AACATTATTGCACCAATGGGAGGTAGAATCTTGCTCACGACCCGAATGGGGTCAGTGGCT GATGCTGTTAAACGCCAAATGCCATCAAATGAATATAAATGTGTTGTACTGGGGGGTTTA GATCACAGAGATATTATGCAGATCTTGAACCATCATGTGCCTCCTAATGAAGATTTGGAA CTTCGAAGTGTAGCTGAATGGATTGTACACAACCTCGAAGGATGTCCTTTTGTAGCAAAA GTGATTGGTCAGTACCTCAGAGACAACACTGATCATAGCAATTGGAATGACTTCTTAAAT AAAAAAGTATGTCATTTAGACGATATTGCACCTAGGGTTATGGAGATGCTCAGGTTGAGC TATGAAGATCTAACCTCAGAGGTGCAGCTTTGCTTTCAGTACTGCAGCATATTTCCATCC CATTACAAATTCAGGATGGAAGAGCTTACCGAGATGTGGGTGAGTTCAGGATTGATACTG CAAAGCACAAAGGGGAACAGTGGCCAGGAGAAAATTGCTCGGGAACACTTCAATATTCTG TTGAAAAAATCATTCTTTTCACTGATACCCAGAGAATTACATCCCGATCCTTCTACAGAT TACTATGTCATGCATGATTTGATTTATGAATTGTCATGCCTTGTTTCTAGCGAGGAATTC TCAACATTTAAAGTCACCAAATGCAATACTGCTGATGTATCTGAAAGAGTACGTCACCTA TACATTGAAGGGATAAATTCTGAAGCTATCAATGTTATATCCAAGTCCAAGTACCTCCGT ACTCTTATTATAGCGAATGAGGAATGGCCACTTAAGGCAGGACTGGCTGATAATCTTAAG AAAGCAATGAAGGGCATAACAAGCTTGCGGCTCTTAAAGTTTGATGGACATGGATGGTTT GACATAAATGATGCTATTGCGGAACTAAAGCACTTAAGGTACATCTGTATGTCTGCTACT AACAAAAGCAATCTGAATAAATTGTTTAAACTCTTCCACCTGGAGGTCCTTAAGCTACTG AAGATAGAAGGAGAAGAACAGGCGAGCGTCAGTGATTTATGCAATCTAGCTAACTTGCAG AAACTGTATCTTCCAAAACCTGCATTATCCAGAGTCCCTCATATTGGAAGACTAACTAAT CTTCGTGAGTTGAATGGGTTGAGCGTGAAGAAAGAAGAAGGACACAAAATATCTGAGCTG AAGGACTTAAAGAACCTCCGGAAAGTCTTTGTGTTTGATGTTGAGAATGTAAGCAACTGT AGTGAAGCTTCCTTGGCTGAATTGAGCAATAAGAATGATATGGAACTGTTATCTTTGGAG TGGTCAAATCAACATAATAGGATTAATGAGCGAATTCTTGATACAGTTGTTCCTTACAAA CGTATTAGGCATTTAAGAATTTCTGGTTATAAGGGTGTTTTGCCTCCACTGTGGATTCGA AGGAAAGTCCTTACCAAATTGGTACGCTTGAAGATTGTTGGATGTCCTAAATGGGATGAT CTCCCTTCCTTCGCGAGTCTATCTAGTCTGAAGCATGTCTTACTGGAGGACCTACCAAAT CTGAAATGCATTGGGGGACCTGATGGTGATGGATTGCCTCCTTTCTTGGTTACCTTAGTT GTAAAAGAATGCCTAGAACTGTTGAATTTACCTCATCTACCTTATAGTCTAAAGCATCTG GGGATAAATAAAGTTGGAATATCTTGTCTGCCAACCAGTAGTCAGATGGCATTACAAAAC GTGTCTACAGTGGATCCACAGCTGTGCAGTCTCCATGTAGATTCTTGTCCTAATTTGTTG TCCTTCGGATCATGTATTGTAGAAGAGCAACACTACAAAGCTCTTACTAGCTTGAAAGTC ATCGGCTGCAGCATGCTCGAGAAGCTCCCAAGTGAAGAACATTTTAGAAGAATATCCACA ATGGAGAGTATTGAAATTCTTCAATGTCAGAGTTTGTCGACCTTGGGTGGCCTAGGAGCA CTTGCTTCCTTGAAAATACTGAAAATACAGCAGTGCACTCATCTAACTGCTACATCTTCA GGGATTCCGGTAGCACCAGCTATGCGGTCTTCTCTTGTGCTTGACACCCTTGAAATTGAT GACCATCTTTTGCTTCTTCAGAATCCATTTAGAAACTTCTGCCTCACTAGAAGACTTGTA TCTAATGGATCTGAAATGCTTGAGTTGCCTCAGGAATGGTTATTGCAGAATAGTTCTCAG TTGGAGCATATAGAAATAAACAATGCAAATCTGCTCAGATCACTGCCTTCAACTATGGAC ACTTTGCACTCCCTGAGGAGTCTGGTTCTGTGTAATGCTCCCCTCCTCGAGACACTTCCT GCTATGCCCCCCAATCTGTGGGCTCTTCAAATAAGTGGTTGTTGCACTCGTTTAAAGGTG GGGTGTAAAACCAATGGTTCTGAATGGGAGAAGATTTTGCCAATCCATAAAGTTGATATA AACTAA

Peptide Sequence

PEP ID	Os12t0511900-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:19754488:19757913:-1 gene:Os12g0511900 transcript:Os12t0511900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os12t0511900-00)
Sequence	MVEAAAIAFAKSSAIFVGKKVAETVISYVVNKALDRLPLENEDLKTKLKSKLSKTQAMLY GITLQEIQDNQGLVEWLWQFRDAIQEAEDALDELDFFDLEKVCNRKAESSSSLVPKFMRL QLSVSSNNSNSSRKNLKNALMRLESVFDDAANFRVVTGHGLHTSPQRNEGRIQDTTNRNE TTRVLATPVFGRQKEKDEIIEWLGVEAPGRDSKLSVCAIVGGGGMGKTSLAQLVCQDKKV QDHFGDMIIWVHVPKRFEPVVLVARMLESINRNRVTASSLDILQLDLTKELVTKRFLLVL DDAWEDGENELWGQFLSPLRNIIAPMGGRILLTTRMGSVADAVKRQMPSNEYKCVVLGGL DHRDIMQILNHHVPPNEDLELRSVAEWIVHNLEGCPFVAKVIGQYLRDNTDHSNWNDFLN KKVCHLDDIAPRVMEMLRLSYEDLTSEVQLCFQYCSIFPSHYKFRMEELTEMWVSSGLIL QSTKGNSGQEKIAREHFNILLKKSFFSLIPRELHPDPSTDYYVMHDLIYELSCLVSSEEF STFKVTKCNTADVSERVRHLYIEGINSEAINVISKSKYLRTLIIANEEWPLKAGLADNLK KAMKGITSLRLLKFDGHGWFDINDAIAELKHLRYICMSATNKSNLNKLFKLFHLEVLKLL KIEGEEQASVSDLCNLANLQKLYLPKPALSRVPHIGRLTNLRELNGLSVKKEEGHKISEL KDLKNLRKVFVFDVENVSNCSEASLAELSNKNDMELLSLEWSNQHNRINERILDTVVPYK RIRHLRISGYKGVLPPLWIRRKVLTKLVRLKIVGCPKWDDLPSFASLSSLKHVLLEDLPN LKCIGGPDGDGLPPFLVTLVVKECLELLNLPHLPYSLKHLGINKVGISCLPTSSQMALQN VSTVDPQLCSLHVDSCPNLLSFGSCIVEEQHYKALTSLKVIGCSMLEKLPSEEHFRRIST MESIEILQCQSLSTLGGLGALASLKILKIQQCTHLTATSSGIPVAPAMRSSLVLDTLEID DHLLLLQNPFRNFCLTRRLVSNGSEMLELPQEWLLQNSSQLEHIEINNANLLRSLPSTMD TLHSLRSLVLCNAPLLETLPAMPPNLWALQISGCCTRLKVGCKTNGSEWEKILPIHKVDI N

Transcript Sequence

Transcript ID	Os12t0511900-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:19754488:19757913:-1 gene:Os12g0511900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein, expressed. (Os12t0511900-00)
Sequence	ATGGTGGAAGCTGCTGCTATTGCTTTTGCCAAGAGCTCAGCCATTTTTGTTGGGAAGAAA GTTGCAGAGACAGTGATCAGTTATGTTGTGAACAAAGCCCTTGATCGCCTTCCGCTGGAG AATGAGGATTTGAAGACTAAGTTGAAGAGTAAGCTCTCCAAAACTCAAGCAATGTTATAT GGCATTACTCTGCAGGAGATCCAGGACAACCAAGGGTTGGTTGAATGGCTTTGGCAGTTC CGCGATGCCATACAGGAGGCCGAGGATGCACTTGATGAGCTTGACTTCTTTGACTTGGAG AAGGTGTGCAATCGGAAGGCAGAATCTTCATCATCCTTGGTCCCTAAATTCATGAGATTG CAGCTGTCTGTAAGTTCTAATAACTCCAACAGCAGTAGAAAGAATCTCAAGAATGCTCTG ATGAGGTTAGAATCTGTCTTTGATGATGCTGCAAATTTCCGAGTGGTAACTGGGCATGGA CTTCACACTTCCCCTCAACGTAATGAAGGGCGCATACAAGATACGACCAACCGAAATGAG ACAACGAGAGTGTTAGCAACACCTGTATTTGGAAGGCAGAAGGAAAAAGATGAGATAATT GAATGGCTGGGTGTTGAGGCTCCAGGGAGAGATAGCAAACTCTCAGTGTGTGCAATAGTG GGTGGGGGTGGTATGGGGAAAACATCTCTTGCTCAGCTTGTCTGTCAAGATAAGAAGGTT CAGGATCATTTCGGCGACATGATTATCTGGGTGCATGTTCCCAAGCGCTTTGAACCTGTA GTGTTGGTGGCAAGAATGTTGGAATCCATTAACAGGAACAGAGTTACTGCATCTTCTTTG GACATACTGCAATTAGATCTCACTAAAGAGTTGGTTACTAAGAGATTTTTACTGGTTCTG GATGATGCATGGGAGGATGGGGAAAATGAGCTATGGGGGCAATTTTTATCTCCCCTGAGG AACATTATTGCACCAATGGGAGGTAGAATCTTGCTCACGACCCGAATGGGGTCAGTGGCT GATGCTGTTAAACGCCAAATGCCATCAAATGAATATAAATGTGTTGTACTGGGGGGTTTA GATCACAGAGATATTATGCAGATCTTGAACCATCATGTGCCTCCTAATGAAGATTTGGAA CTTCGAAGTGTAGCTGAATGGATTGTACACAACCTCGAAGGATGTCCTTTTGTAGCAAAA GTGATTGGTCAGTACCTCAGAGACAACACTGATCATAGCAATTGGAATGACTTCTTAAAT AAAAAAGTATGTCATTTAGACGATATTGCACCTAGGGTTATGGAGATGCTCAGGTTGAGC TATGAAGATCTAACCTCAGAGGTGCAGCTTTGCTTTCAGTACTGCAGCATATTTCCATCC CATTACAAATTCAGGATGGAAGAGCTTACCGAGATGTGGGTGAGTTCAGGATTGATACTG CAAAGCACAAAGGGGAACAGTGGCCAGGAGAAAATTGCTCGGGAACACTTCAATATTCTG TTGAAAAAATCATTCTTTTCACTGATACCCAGAGAATTACATCCCGATCCTTCTACAGAT TACTATGTCATGCATGATTTGATTTATGAATTGTCATGCCTTGTTTCTAGCGAGGAATTC TCAACATTTAAAGTCACCAAATGCAATACTGCTGATGTATCTGAAAGAGTACGTCACCTA TACATTGAAGGGATAAATTCTGAAGCTATCAATGTTATATCCAAGTCCAAGTACCTCCGT ACTCTTATTATAGCGAATGAGGAATGGCCACTTAAGGCAGGACTGGCTGATAATCTTAAG AAAGCAATGAAGGGCATAACAAGCTTGCGGCTCTTAAAGTTTGATGGACATGGATGGTTT GACATAAATGATGCTATTGCGGAACTAAAGCACTTAAGGTACATCTGTATGTCTGCTACT AACAAAAGCAATCTGAATAAATTGTTTAAACTCTTCCACCTGGAGGTCCTTAAGCTACTG AAGATAGAAGGAGAAGAACAGGCGAGCGTCAGTGATTTATGCAATCTAGCTAACTTGCAG AAACTGTATCTTCCAAAACCTGCATTATCCAGAGTCCCTCATATTGGAAGACTAACTAAT CTTCGTGAGTTGAATGGGTTGAGCGTGAAGAAAGAAGAAGGACACAAAATATCTGAGCTG AAGGACTTAAAGAACCTCCGGAAAGTCTTTGTGTTTGATGTTGAGAATGTAAGCAACTGT AGTGAAGCTTCCTTGGCTGAATTGAGCAATAAGAATGATATGGAACTGTTATCTTTGGAG TGGTCAAATCAACATAATAGGATTAATGAGCGAATTCTTGATACAGTTGTTCCTTACAAA CGTATTAGGCATTTAAGAATTTCTGGTTATAAGGGTGTTTTGCCTCCACTGTGGATTCGA AGGAAAGTCCTTACCAAATTGGTACGCTTGAAGATTGTTGGATGTCCTAAATGGGATGAT CTCCCTTCCTTCGCGAGTCTATCTAGTCTGAAGCATGTCTTACTGGAGGACCTACCAAAT CTGAAATGCATTGGGGGACCTGATGGTGATGGATTGCCTCCTTTCTTGGTTACCTTAGTT GTAAAAGAATGCCTAGAACTGTTGAATTTACCTCATCTACCTTATAGTCTAAAGCATCTG GGGATAAATAAAGTTGGAATATCTTGTCTGCCAACCAGTAGTCAGATGGCATTACAAAAC GTGTCTACAGTGGATCCACAGCTGTGCAGTCTCCATGTAGATTCTTGTCCTAATTTGTTG TCCTTCGGATCATGTATTGTAGAAGAGCAACACTACAAAGCTCTTACTAGCTTGAAAGTC ATCGGCTGCAGCATGCTCGAGAAGCTCCCAAGTGAAGAACATTTTAGAAGAATATCCACA ATGGAGAGTATTGAAATTCTTCAATGTCAGAGTTTGTCGACCTTGGGTGGCCTAGGAGCA CTTGCTTCCTTGAAAATACTGAAAATACAGCAGTGCACTCATCTAACTGCTACATCTTCA GGGATTCCGGTAGCACCAGCTATGCGGTCTTCTCTTGTGCTTGACACCCTTGAAATTGAT GACCATCTTTTGCTTCTTCAGAATCCATTTAGAAACTTCTGCCTCACTAGAAGACTTGTA TCTAATGGATCTGAAATGCTTGAGTTGCCTCAGGAATGGTTATTGCAGAATAGTTCTCAG TTGGAGCATATAGAAATAAACAATGCAAATCTGCTCAGATCACTGCCTTCAACTATGGAC ACTTTGCACTCCCTGAGGAGTCTGGTTCTGTGTAATGCTCCCCTCCTCGAGACACTTCCT GCTATGCCCCCCAATCTGTGGGCTCTTCAAATAAGTGGTTGTTGCACTCGTTTAAAGGTG GGGTGTAAAACCAATGGTTCTGAATGGGAGAAGATTTTGCCAATCCATAAAGTTGATATA AACTAA