Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0511600-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:19729777:19734112:-1 gene:Os12g0511600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein. (Os12t0511600-00)
Sequence	ATGGATGATGGAGTATATCACTGCCAAGTGAATTGGGCGGTGAACCTTGCCATGCCGTTG GTGGACAAAGCCTTCTCCTACATGGATGGCGTCAACCAGGATAGGAAAGAGAAGCTGTTG CAGGGTCTCTCAGTAGTACGAAATGACCATAGCTATCCGCGGTACCGATTTACCGTTGAT CATCCACGAGAGACGAACCTTTTGCGCGCTGTTGCGGATCTGGAGGACGCAATCGACGAT GTCGAGCACAGAAAGCTGCAAGAGGTTCGTGATCCCATACTTCACAACTTTAACAAGCAT TTTGTGCCTTCTGGCAATAGCCTGGAATTTGCTATCCGGCGGTTAGAAGATGCTGTCGTT ATGTTAGAAAAAGATGCGCCATTCTACCCATCCATTGGTTTTGTCAGTCCACGTGGTAAT CTCTATTACAAATACAATGAGAACCGCATGGTATTGTTTGGTAGAGAAAGAGAGCAGCAA CAGATAGTGCAGTGGTTGATTGAAGAGCCTCAACCTATTAGCATAAACCATCCTGTCTCC ATATTTGCAATAGTAGGTATGGCAGGCATGGGGAAGACAGAACTTGCTCGTCTTGCTTAT GAGGACTCGAAAGTTCGATTGAATTTTGACTCATGTACCTGGGTGTCACTGCATGGTAAT TTTAGTGCAGAAGCAATAACAAGGGCTATAGTGGCATCAATTACCGGAAGACTTGCTATG CTGCAGACCACGATTGCTACTGATAATATCAGAGACAATAAGCTTCTACTTGTTCTGGAT GATGCCTGGGATGATACTAGTCTGGAGGAGTGGAAATCAATGGCAGATTCTCTAAAAGAT TGCAAACCTGGGAGCAGGATCCTATTGACGACTCAAATGCAATCAGTAGTGGACATTGCA GAAGATGGCATAGGAGTTAAAGCTGACTGTGTGAAATTGGGTGAACTTGATGAAGTTGAC AATCTCAAGCTCTTTGAAACTTGTTTGCTTTCTGATGGGCGTTCTGAAGATTATGCTGAT TTCGCATTGATTGGTGAACAGATAGCAAAACGGATTGGTGGATGCCCTCTACTAACGGCT ATGGTTGCTTCACAGTTGAGTTGCAATATGAATCCCCAACACTGGAACACCGTACTTCAA GAAGGCTGGCAGTATGTAGCGGGATTTGACTTTCTTTTTACTAGTTACAACCGTCTACCT ACGGAGCTACAAAATTGCTTTAGATATTGCAGTATATTTCCAAAGGGACACAGATTTGAC AAGTTGGAATTGGTAAACATGTGGATTGGTTCTGGATTGATACCTCTCAGCCCACTGGAA AGAGAGTTTGATGTGGCGAAACGATTGATATCTCTCAGCTCATCAGAAAAACGGGATGCT GATGTGGGGAGGCAATTGTTACCTCTCAGCCAATCGGGAAAAACGGCTGTTGATTTGGGG GAACAATACTTCGATGCATTGGTTAAAAAATCATTCTTCTGCCCTATGCTAGAAGCAGAA CCTTCTAATGGAGATCAGAAAGAATATTATGTCTTGCATAGTTTAATGCATGACTTGGCA CAATTTGTCTCACAAGGTGAATGTGCGAGAGTAGATAACGATGATTTCCAGAATGTCATG CCGATGACCAGACACTTGTCAATTGTACATTGTGGCAATTTAAACCAGATCCCCCGTTTG AAGTATTTGCGGACTCTTATCATACAAAGTGAGTTCTATCTGGATCAAGAATCTGAACTT GCTCTCCGATATGTTCTGCAGTGTTCTAGACACTTGCGTCTGCTATACCTGCGTGGGCCA TCCCTTTCACCTGAACTTTGTGAACTCAACACTCTAACTCATCTCCGTTATCTCTTTTTA TTTTCATGTGTTGGATCTATAATTAACCATGTGCGTGGACTCGATCATCTGCAAGTGCTC AAGATCAATTACTTCACTAATGATGAAGAAGAATACTTCAATTACATACATAAATTACAG TCATTGCATTGTCTCCATGTTCCTGAAAATATTATGTTATCCAAGATCCTTCAAATTGGG ATGTTAACCTCGCTTCAGGAGTTACATGGAATTGGGGTTGCTGAAAATGATGGTCACAGT ATGAGTGTGCTGAGTAATTTAACTGGCCTATGTCGACTCAGCCTAAGAAATCTCCAAAAT GTTAGGAACTGTAAAGAGTCTATGGATATCAAAATAAAGGACATGAGACAGATGAGATTT TTGTCTCTGTCATGGAACAAATACTTGAATGATCCAGAGAATCTTGATCATCAAATCATT GACAGCCTGGAACCAAACAAAGAAATTCAGCAGTTGCATATACATGGATATAGTGGAGTC CGACTTCCGATTTGGATTGAGAATCCATCGCTCATCCATTTGGTCTCACTTGAGCTTGAA TGTTGCATGAAATGGAAGAGCATGCCGTCATTTCAGAAGCTAAGTTCACTGAAGTATCTC AAGTTGGAACACCTTTTACAGTTAGAATGCATAGGTACAGTGAAAAAGGAGCAATTTGGG AACAATGAACCAGAGAATGTTCTCCCTCCATTTCTCAAAACTCTCATCATTCGGTGGTGC TCTAGCCTGAAAAATCTCCCGTCAATACCTTGTACCCTTCATCAATTAATAATAAAGCAT GTTGGGCTTGCTGTTCTGCCGATGATACATCAAAGTTATACTGGTACGCGTGAATCATCA TTCTCGTCATCATCAGTAAAGTCATGTCTTGTTCTTTTGCACATTGAATGTTGTGAAGAT TTGACTTCTCTGGATAAAGGTCTTCTGGAGAAGCAGCAATATCTTCAGTCCCTCAAGACA TTACTTGTGAGACATTGTGAAAACCTAAGACATCTGCCTGCAAATGGTTTAACAGAATTA CATCACCTGACTTCCCTAGAAATAGTTGCATGCCCAATGCTGAGGAATGTTGAGGCCAAA GGCAACCTGTGGCCTATGTCACTCAAGAAGTTGGACATCAATCCATGTGGTCATATTGAG GATTCAGTTCTCATGTCACTGCAAGACCTCACATCCCTCAGAAGTTTTACACTGTTCAGC TGCTGTAACATAGAGAAACTTCCATCAGAGGAAGTGTTTAGGACTCTGAAAAATCTGAAT GATGTTTCCATAGCAAGATGCAAAAACTTGTTATCCTTGGGTGGTCTTGGAGCTGCTCCA TCCTTGAGAGTTCTATCAATCCTATGTTGTGACAAGATCCATCATTTATATTCTGAACAA GCTGGTTGCTCCTTTAAGCTGCGTAAGCTCGAAGTTGATCGTGAAGCGATGTTGCTAGTG GAGCCAATAAGGAGTCTCAAGTACACTATGGAGCTGCACATCGGTGATGATCATGCGATG GAGTCCTTGCCTGAGGAGTGGTTGCTACAGAATGCTTCTTCGCTCCGTTTGATCGAGATA GGGGTTGCTAAGAATCTGCAGGCCCTACCTGCTCAGATGGAAAATTTGGAATTACTACAG GGCTTGCATATCGAAAGAGCCCCTGCAATTAAGGTCCTCCCACAGCTACCAGCTTCACTT AATAAGCTGACAATCTGGGGCTGTGACCCAAGGTTTCTGGAGCGCTATGAAACTAATGTT GGTTCAGACTGGGTCAAAATCAAAGACATTGCTCATGTGGATATGAAGGCCTACTCCGAA GATTCAAGCGACGATGATGATAAGATTCAATATTTTGATGACAGCACCACCAATCCTTCC CCCCGATTTGTTGTCATAGACTAA

Peptide Sequence

PEP ID	Os12t0511600-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:19729777:19734112:-1 gene:Os12g0511600 transcript:Os12t0511600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein. (Os12t0511600-00)
Sequence	MDDGVYHCQVNWAVNLAMPLVDKAFSYMDGVNQDRKEKLLQGLSVVRNDHSYPRYRFTVD HPRETNLLRAVADLEDAIDDVEHRKLQEVRDPILHNFNKHFVPSGNSLEFAIRRLEDAVV MLEKDAPFYPSIGFVSPRGNLYYKYNENRMVLFGREREQQQIVQWLIEEPQPISINHPVS IFAIVGMAGMGKTELARLAYEDSKVRLNFDSCTWVSLHGNFSAEAITRAIVASITGRLAM LQTTIATDNIRDNKLLLVLDDAWDDTSLEEWKSMADSLKDCKPGSRILLTTQMQSVVDIA EDGIGVKADCVKLGELDEVDNLKLFETCLLSDGRSEDYADFALIGEQIAKRIGGCPLLTA MVASQLSCNMNPQHWNTVLQEGWQYVAGFDFLFTSYNRLPTELQNCFRYCSIFPKGHRFD KLELVNMWIGSGLIPLSPLEREFDVAKRLISLSSSEKRDADVGRQLLPLSQSGKTAVDLG EQYFDALVKKSFFCPMLEAEPSNGDQKEYYVLHSLMHDLAQFVSQGECARVDNDDFQNVM PMTRHLSIVHCGNLNQIPRLKYLRTLIIQSEFYLDQESELALRYVLQCSRHLRLLYLRGP SLSPELCELNTLTHLRYLFLFSCVGSIINHVRGLDHLQVLKINYFTNDEEEYFNYIHKLQ SLHCLHVPENIMLSKILQIGMLTSLQELHGIGVAENDGHSMSVLSNLTGLCRLSLRNLQN VRNCKESMDIKIKDMRQMRFLSLSWNKYLNDPENLDHQIIDSLEPNKEIQQLHIHGYSGV RLPIWIENPSLIHLVSLELECCMKWKSMPSFQKLSSLKYLKLEHLLQLECIGTVKKEQFG NNEPENVLPPFLKTLIIRWCSSLKNLPSIPCTLHQLIIKHVGLAVLPMIHQSYTGTRESS FSSSSVKSCLVLLHIECCEDLTSLDKGLLEKQQYLQSLKTLLVRHCENLRHLPANGLTEL HHLTSLEIVACPMLRNVEAKGNLWPMSLKKLDINPCGHIEDSVLMSLQDLTSLRSFTLFS CCNIEKLPSEEVFRTLKNLNDVSIARCKNLLSLGGLGAAPSLRVLSILCCDKIHHLYSEQ AGCSFKLRKLEVDREAMLLVEPIRSLKYTMELHIGDDHAMESLPEEWLLQNASSLRLIEI GVAKNLQALPAQMENLELLQGLHIERAPAIKVLPQLPASLNKLTIWGCDPRFLERYETNV GSDWVKIKDIAHVDMKAYSEDSSDDDDKIQYFDDSTTNPSPRFVVID

Transcript Sequence

Transcript ID	Os12t0511600-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:19729777:19734112:-1 gene:Os12g0511600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NB-ARC domain containing protein. (Os12t0511600-00)
Sequence	ATGGATGATGGAGTATATCACTGCCAAGTGAATTGGGCGGTGAACCTTGCCATGCCGTTG GTGGACAAAGCCTTCTCCTACATGGATGGCGTCAACCAGGATAGGAAAGAGAAGCTGTTG CAGGGTCTCTCAGTAGTACGAAATGACCATAGCTATCCGCGGTACCGATTTACCGTTGAT CATCCACGAGAGACGAACCTTTTGCGCGCTGTTGCGGATCTGGAGGACGCAATCGACGAT GTCGAGCACAGAAAGCTGCAAGAGGTTCGTGATCCCATACTTCACAACTTTAACAAGCAT TTTGTGCCTTCTGGCAATAGCCTGGAATTTGCTATCCGGCGGTTAGAAGATGCTGTCGTT ATGTTAGAAAAAGATGCGCCATTCTACCCATCCATTGGTTTTGTCAGTCCACGTGGTAAT CTCTATTACAAATACAATGAGAACCGCATGGTATTGTTTGGTAGAGAAAGAGAGCAGCAA CAGATAGTGCAGTGGTTGATTGAAGAGCCTCAACCTATTAGCATAAACCATCCTGTCTCC ATATTTGCAATAGTAGGTATGGCAGGCATGGGGAAGACAGAACTTGCTCGTCTTGCTTAT GAGGACTCGAAAGTTCGATTGAATTTTGACTCATGTACCTGGGTGTCACTGCATGGTAAT TTTAGTGCAGAAGCAATAACAAGGGCTATAGTGGCATCAATTACCGGAAGACTTGCTATG CTGCAGACCACGATTGCTACTGATAATATCAGAGACAATAAGCTTCTACTTGTTCTGGAT GATGCCTGGGATGATACTAGTCTGGAGGAGTGGAAATCAATGGCAGATTCTCTAAAAGAT TGCAAACCTGGGAGCAGGATCCTATTGACGACTCAAATGCAATCAGTAGTGGACATTGCA GAAGATGGCATAGGAGTTAAAGCTGACTGTGTGAAATTGGGTGAACTTGATGAAGTTGAC AATCTCAAGCTCTTTGAAACTTGTTTGCTTTCTGATGGGCGTTCTGAAGATTATGCTGAT TTCGCATTGATTGGTGAACAGATAGCAAAACGGATTGGTGGATGCCCTCTACTAACGGCT ATGGTTGCTTCACAGTTGAGTTGCAATATGAATCCCCAACACTGGAACACCGTACTTCAA GAAGGCTGGCAGTATGTAGCGGGATTTGACTTTCTTTTTACTAGTTACAACCGTCTACCT ACGGAGCTACAAAATTGCTTTAGATATTGCAGTATATTTCCAAAGGGACACAGATTTGAC AAGTTGGAATTGGTAAACATGTGGATTGGTTCTGGATTGATACCTCTCAGCCCACTGGAA AGAGAGTTTGATGTGGCGAAACGATTGATATCTCTCAGCTCATCAGAAAAACGGGATGCT GATGTGGGGAGGCAATTGTTACCTCTCAGCCAATCGGGAAAAACGGCTGTTGATTTGGGG GAACAATACTTCGATGCATTGGTTAAAAAATCATTCTTCTGCCCTATGCTAGAAGCAGAA CCTTCTAATGGAGATCAGAAAGAATATTATGTCTTGCATAGTTTAATGCATGACTTGGCA CAATTTGTCTCACAAGGTGAATGTGCGAGAGTAGATAACGATGATTTCCAGAATGTCATG CCGATGACCAGACACTTGTCAATTGTACATTGTGGCAATTTAAACCAGATCCCCCGTTTG AAGTATTTGCGGACTCTTATCATACAAAGTGAGTTCTATCTGGATCAAGAATCTGAACTT GCTCTCCGATATGTTCTGCAGTGTTCTAGACACTTGCGTCTGCTATACCTGCGTGGGCCA TCCCTTTCACCTGAACTTTGTGAACTCAACACTCTAACTCATCTCCGTTATCTCTTTTTA TTTTCATGTGTTGGATCTATAATTAACCATGTGCGTGGACTCGATCATCTGCAAGTGCTC AAGATCAATTACTTCACTAATGATGAAGAAGAATACTTCAATTACATACATAAATTACAG TCATTGCATTGTCTCCATGTTCCTGAAAATATTATGTTATCCAAGATCCTTCAAATTGGG ATGTTAACCTCGCTTCAGGAGTTACATGGAATTGGGGTTGCTGAAAATGATGGTCACAGT ATGAGTGTGCTGAGTAATTTAACTGGCCTATGTCGACTCAGCCTAAGAAATCTCCAAAAT GTTAGGAACTGTAAAGAGTCTATGGATATCAAAATAAAGGACATGAGACAGATGAGATTT TTGTCTCTGTCATGGAACAAATACTTGAATGATCCAGAGAATCTTGATCATCAAATCATT GACAGCCTGGAACCAAACAAAGAAATTCAGCAGTTGCATATACATGGATATAGTGGAGTC CGACTTCCGATTTGGATTGAGAATCCATCGCTCATCCATTTGGTCTCACTTGAGCTTGAA TGTTGCATGAAATGGAAGAGCATGCCGTCATTTCAGAAGCTAAGTTCACTGAAGTATCTC AAGTTGGAACACCTTTTACAGTTAGAATGCATAGGTACAGTGAAAAAGGAGCAATTTGGG AACAATGAACCAGAGAATGTTCTCCCTCCATTTCTCAAAACTCTCATCATTCGGTGGTGC TCTAGCCTGAAAAATCTCCCGTCAATACCTTGTACCCTTCATCAATTAATAATAAAGCAT GTTGGGCTTGCTGTTCTGCCGATGATACATCAAAGTTATACTGGTACGCGTGAATCATCA TTCTCGTCATCATCAGTAAAGTCATGTCTTGTTCTTTTGCACATTGAATGTTGTGAAGAT TTGACTTCTCTGGATAAAGGTCTTCTGGAGAAGCAGCAATATCTTCAGTCCCTCAAGACA TTACTTGTGAGACATTGTGAAAACCTAAGACATCTGCCTGCAAATGGTTTAACAGAATTA CATCACCTGACTTCCCTAGAAATAGTTGCATGCCCAATGCTGAGGAATGTTGAGGCCAAA GGCAACCTGTGGCCTATGTCACTCAAGAAGTTGGACATCAATCCATGTGGTCATATTGAG GATTCAGTTCTCATGTCACTGCAAGACCTCACATCCCTCAGAAGTTTTACACTGTTCAGC TGCTGTAACATAGAGAAACTTCCATCAGAGGAAGTGTTTAGGACTCTGAAAAATCTGAAT GATGTTTCCATAGCAAGATGCAAAAACTTGTTATCCTTGGGTGGTCTTGGAGCTGCTCCA TCCTTGAGAGTTCTATCAATCCTATGTTGTGACAAGATCCATCATTTATATTCTGAACAA GCTGGTTGCTCCTTTAAGCTGCGTAAGCTCGAAGTTGATCGTGAAGCGATGTTGCTAGTG GAGCCAATAAGGAGTCTCAAGTACACTATGGAGCTGCACATCGGTGATGATCATGCGATG GAGTCCTTGCCTGAGGAGTGGTTGCTACAGAATGCTTCTTCGCTCCGTTTGATCGAGATA GGGGTTGCTAAGAATCTGCAGGCCCTACCTGCTCAGATGGAAAATTTGGAATTACTACAG GGCTTGCATATCGAAAGAGCCCCTGCAATTAAGGTCCTCCCACAGCTACCAGCTTCACTT AATAAGCTGACAATCTGGGGCTGTGACCCAAGGTTTCTGGAGCGCTATGAAACTAATGTT GGTTCAGACTGGGTCAAAATCAAAGACATTGCTCATGTGGATATGAAGGCCTACTCCGAA GATTCAAGCGACGATGATGATAAGATTCAATATTTTGATGACAGCACCACCAATCCTTCC CCCCGATTTGTTGTCATAGACTAA