Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0510000-02
CDS Infomation

cds chromosome:IRGSP-1.0:12:19642586:19650215:1 gene:Os12g0510000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0510000-01);Conserved hypothetical protein. (Os12t0510000-02)
Sequence

ATGAAGCTGGTGGTGGTAGTCAATGCTCGAGATCCCTTATTCTACCGCTGTCCTGATCTT
GAGGTAGCGAATGGCATGGTGGAAAGAAGAGTATCTGAGGATGGTGGCAGATCTGGAGCC
AAGGTCGATGGGGATGGCCAGGGCATTGCGGCGGCGGACCCTGGCAGACTAGCATGGCAT
GGCAGCAGAGACAACGACAAGAGGCAGAGGAAGTGGGCGGCCAATCTAGGAGGCACACCA
CCCGGGTCATGTATTGTTCTGCTCCACATCTCCCTGTTAAGCAGAGTGCCCAACAGCGCT
CCCAAGTTTTGCTGGTTAATTGTGATGCCTGGTTGGTTTAGTGGCTGGTGTTGCCCAGGT
TTCCAAGTCCAGCAGCTGCCATCATCCAAAGGCACTGGCTTGGTCTTTGCTATGCTCCTT
CTCCTTCATCAGGTTCGTTGA

Peptide Sequence

PEP ID

Os12t0510000-02
PEP Infomation

pep chromosome:IRGSP-1.0:12:19642586:19650215:1 gene:Os12g0510000 transcript:Os12t0510000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0510000-01);Conserved hypothetical protein. (Os12t0510000-02)
Sequence

MKLVVVVNARDPLFYRCPDLEVANGMVERRVSEDGGRSGAKVDGDGQGIAAADPGRLAWH
GSRDNDKRQRKWAANLGGTPPGSCIVLLHISLLSRVPNSAPKFCWLIVMPGWFSGWCCPG
FQVQQLPSSKGTGLVFAMLLLLHQVR

Transcript Sequence

Transcript ID

Os12t0510000-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:19642586:19650215:1 gene:Os12g0510000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0510000-01);Conserved hypothetical protein. (Os12t0510000-02)
Sequence

CCTCTCGTCTCTCTCGCTCCCTCTACCGCTGCCGCCACCTCGCGTCTCCTCCGCCTCCCC
ATCGCGCTGCCACCTCCGCATCGCGCTGTCACCATCGTCGTCCCCGTTACCGAGCGCCGC
CGCCTCCGCCTCCACCTCTACCTCCCCCTCGCGCCGCCACCTCCGCCTCTGCCTCCTCTG
CCTTCCCTTCTGCCTCGCGTGGCCGTTGCCGGGTGCGCCACCTCCGGCTCACGCCGCCGC
TGCCGACCGTCATGTGTTTGGGGGACGCGGATCTGACCGCCGCAGCGTCGTCCTCCGCTA
TCGTCGCCATCGCCGAGCGTCACCGTTGCATCCTCCGCCGCACCTCCGTCCTTCACCGCC
AAAGACCGCTGTGAGCGGTCGACCTCGGGTGGAGCCGGCCGCCATTGCCGCAACCTCGTG
GGCTAAGCTACAGAACGGTTGTCCGTCGATTTGAGGAGGGAGAGGCGGCAGCAGCAATAA
AGAGGGGAGAGGCATGCCGGCGGCTGTATGGTGGAGAAGCGCCGCCGCAGCCCGCATCCC
CTCCTCTTGCCCCTCCCTCTCCCACCTGGGCGATTCGTAAGCCGTCGTCGCCGTCGCATG
GGCTCCAGGAACCACCGTCGACTGCCGTCGTCGTGTCCCCTGGTCTCCTCAATCCTCCCG
TGCGCCACTCATGCCGGCGAGATGAGATCGGCGCAAGCAATGTGGCAGTGGGCAACTCCA
AGAAGTCGAGATTGAGAGCTCTGGCTACCGCCTTCGACAATATCTGACCTGGTGCTGCGC
CTGCCTCGGCAGATCGGGCAACGGTGTCGACCTCGGCGATGACACGGATTGCACTCCGTC
CTTTGCGGCGGATCAAGTACACATCGATGGAGCCCCTCTTCTCCTCCCCCCACCGGCAAG
GGCAGATGGAGGCGGTGTGCGCCGGAGGCTGTAGATCAAGTGACGGCCTTGACGCTTTGA
AGCCAGTGGACAAGCTGGCTCCTACACTGAGCGGCAATGGTGGCACCAAAGAGCTGTCCA
GGTGATCAGTTCGCCTGCGGATTTGTTGTTGAAAACACCACCAGGCAGCACGTGGTGGCC
GATGGTCGCGCCTCCACCAACTTCATCAGCGCGTGGATCCAGTATTGATGTTGGGGAGCT
ACTACTTTTCCTACAATCTTGATGTTTTGATTCATTTGGAGTTTTAGTTTGTTGTGCTCT
GATTGTGTATTTTTCTTTTGGTTCGATCAGCATCTTCTGCTCGGTGCCATTCCATTCCCC
AAGACCTTAGTTTGCAGTGTCGTGAACTGAACAAATCCTACGAGAGGCTGGTTCCCATGT
GCCTGTAAGAGGCTCCTGGATTTGAAAGCCTGGTGTTACCAACTAGAGATTATCTTTGTA
TATTTAAGGACCTTTGCTGTGCGGCTGACTTCGTTCAAAGCCACCGTCGGCAGGCTACTG
GGCAAGCTAGGATGCATGAGCTTGGAGCTGGGAGGCTGATATTCTCCCTCCTGTTCTCTG
CTTCTATGGCTGACAGAGGATGAGATAAAGTGGAGTTGGGGGCAAGTGAGGACTGTGAGG
GTATGAGCTACCTCATTATTTTTCAGGCGTTGCCTGATTTTCTCTAATTGTTAACTTATA
TGTCATTCTTTAGTTTTAGAGTGTTTCTATAGGTGTAATTCACTCAATATGTATTTATAT
TACTCCTTTCTTGAGCAAATATGTAGGAACAGAAAAGGGGTCTTTTCTTTATGTGCAATA
GTAAATTGTTGTTTTATAGTGAAATTGCTAAGGCAACTGCTTCTAATTTGCCTAAATCAG
TCATTGCTTGGTTAAAAAAAATAATGACACCATGGCAGACAATTCTGAAGAGACCATATA
TCTTTAGTTTGATTCTAACAACCATCTTCTGTTCTGAACTTACGATATTTAGCCATTGAT
TTATGGATTTTCCATTTATCTATGAATGTTTGGGCTCACCATTAATTTGTTTCATTTCAG
TGACCCTTATCTGTGAAATATTTTTCGCTTCCTCCCACTTTGTTTTCTGCACAATCCATG
TGTCGTGGTTGATGCTGGTTAATGGTTGTATTTCCTCTTTTTTATTTTGGGAGAAGTCTT
CAGTTGATTGGCACATTTAGAAAGTGTATATAGTCTGCTGGAATTTCTTACGATTCTTTT
GCAAAATTATGTATTTAATTTGGTTAGTTCAGGTAGAGGACAGAGCTATATACTATTCCA
TTTGTAATACATAAATTGCTCTAAAAGCACCTCATTTATATTTTTCTATTATAAGTGTTG
ACATCACATGCATTCTTACTCTTCCTCAATTTATGCGAAAGATTGATTTTTTTCCCATAT
GATCGTAGATAAATATTGGCATTGTCGTTATAGGATATATATAATACAATGCTCATTCTA
TATTTAGGTTCCCATCGGATGGCTTATTCAACCAAAGAAAAAGCCAAAATTTGAATTTTC
AAACTTAATTTTGACATTGATTTTGTGATATTTTCAACGTAGTTTCTTTTTCAGCATTGG
CTTTTACGTCACCGAGAACACATATATAAAAGTTTTACCTACAAATTCATTTTTATTCTC
TAATAAGCTGTTTTGGCTTATTACGAAAAAAGCCAAACGATGAGGCCCTTAGCCTATCTA
CACGTGATGGCTAATTTCTGTCTTGTGCCATATGGAGGTACATCAATTGAAATGGGTTCA
ATTCAAGTCTATGTTTCATATCTATTTTTTGCTTGCCTTTCTTTCGACATGATTAAGTGA
CATAATAGTTTTGCGGAGACAATATTTCTAGTTCTATTTAGTTAGTTGAACCACCTCATA
TATGAAATTTCATCTGAGTTAGTGCTATATGACCGAGTTGTAGCTTATTCGTTATGCTTG
GAAATTCATAGTGAAATGGATTCACTTGCAAAAGCGTGTTTGGGACCTTGGGACTGATAT
CCAACTATCAGCATTTCTTATTATCTTGTATAATCTGGTTATGGTACAAGATAAGACTAA
CGCGAGGATGAGCTTTCTCTTGAACATTTCTGTTTGATATCTGAGTAGCTGAGTTGATCA
TGAGTCCTCTGGAGACAGCTCTGGAGAGTCCTTGAACGTTATCTGGTGAGTAATGCTCAA
CCTTCACTATTAGTTTCACCCATCGCTCTTCTGGTTGATTGCTTGCCAGTACTTATGATA
CTAAAACCAAGCATTTCTCCAAAAAAATAAGTAGGACATGCATTTTTAAAGGTAATGCTT
TGCAAATTTTGTCTCACATATTGACTTTGCTTTCAATGTTCCATAGTGTTATTGCATTTT
TTTCCCCTGGAAGTGCTACTCTGCTGTGCTCAATCGTATTTGTTTTTACTGGATTAAAGA
GTAGAACCTCTTCGGATTATTTTTAGTTCCTAATATACTTACTTTTATTCTCTTTTCTTC
CATGAAGCTGGTGGTGGTAGTCAATGCTCGAGATCCCTTATTCTACCGCTGTCCTGATCT
TGAGGTAGCGAATGGCATGGTGGAAAGAAGAGTATCTGAGGATGGTGGCAGATCTGGAGC
CAAGGTCGATGGGGATGGCCAGGGCATTGCGGCGGCGGACCCTGGCAGACTAGCATGGCA
TGGCAGCAGAGACAACGACAAGAGGCAGAGGAAGTGGGCGGCCAATCTAGGAGGCACACC
ACCCGGGTCATGTATTGTTCTGCTCCACATCTCCCTGTTAAGCAGAGTGCCCAACAGCGC
TCCCAAGTTTTGCTGGTTAATTGTGATGCCTGGTTGGTTTAGTGGCTGGTGTTGCCCAGG
TTTCCAAGTCCAGCAGCTGCCATCATCCAAAGGCACTGGCTTGGTCTTTGCTATGCTCCT
TCTCCTTCATCAGGTTCGTTGAAACCATATAAGAGTACGATTGGACCAGATGGAACAAGG
GAAAATAAAATTGGGCATAACATTCTGTTACATTAGAAAAGAGATTCAATGGTGCCTGCT
CGTTGCAATGGATCTAAATTAAATATAGTTCAAGTTGTAAACTAGAAAGAAAAGGTATCC
CCAAACCTAAATAGACACATGCATATACAGATAAGTAGCTAACAAAATGATTTAATCATT
TACAATATTATTCATTATAGACTACTACCATCACCACCACTACTCTCTATATCTGTAAGA
TGGGGGACCTCTGGTGATTGATTAGTCATTGACATATTCATGCT