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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0506400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:19424812:19428447:1 gene:Os12g0506400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cornichon 2 description:Cornichon family protein. (Os12t0506400-01)
Sequence

ATGTCCATCGAGCTCATCCTGTGGCTCTTCTCCTTCGCCTCCATCATGGTCCTCATCGGC
CTCACCGCCTACCAGCTTATATGTTTATCTGATTTGGAGTTTGATTATATCAACCCATAC
GATTCTTCATCTCGCATCAACTCAGTGGTCCTTATAGAATACGCACTCCAAGGGGCCTTG
TGCGCTTCTTTCCTCTTGACACTGCATTGGTTCCCGTTTCTAGTTATGGCACCAGTAGCA
TACTACCATGGCAAATTGTATATGGATCGGAAACACCTTGTAGATGTTACCGAGATATTC
CGGCAACTCAATTGGGAGAAAAAATACAGGATGATCAAGCTTGCATTCTACTTTAGTTTG
TTTATTATAACGATCTACAGGCTTGTGATGACGGCTGTGACGTTATTCATTGATGAGGAT
GCAAATCTGGTTGACACTAGAACTATTTAG

Peptide Sequence

PEP ID

Os12t0506400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:19424812:19428447:1 gene:Os12g0506400 transcript:Os12t0506400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cornichon 2 description:Cornichon family protein. (Os12t0506400-01)
Sequence

MSIELILWLFSFASIMVLIGLTAYQLICLSDLEFDYINPYDSSSRINSVVLIEYALQGAL
CASFLLTLHWFPFLVMAPVAYYHGKLYMDRKHLVDVTEIFRQLNWEKKYRMIKLAFYFSL
FIITIYRLVMTAVTLFIDEDANLVDTRTI

Transcript Sequence

Transcript ID

Os12t0506400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:19424812:19428447:1 gene:Os12g0506400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:cornichon 2 description:Cornichon family protein. (Os12t0506400-01)
Sequence

ACTTTGCTTGCTCTCCGAAAAAAAAAAGGGGGAAAAAAAAAGCTCTTTTCCTCTCCTCGC
GTCCATCCGCGATCCACCACCTCCTCCTCCCGTCTCCGGCGACCGCCGCCGCGCCATTAC
ACCCAGACGCGCCGGTCTCCTCTCGGCACCGGCCGGCCTAGTCGACCGCAGAAGCGGAGG
TGTGACCGGAGCGGAGGTCGTCGGTCAAATCCACTCCGGGGGTTTCTTGAATTCTTGGGA
GCAGAGAGGCAAAAGTGAGGCAGCAGCCATGTCCATCGAGCTCATCCTGTGGCTCTTCTC
CTTCGCCTCCATCATGGTCCTCATCGGCCTCACCGCCTACCAGCTTATATGTTTATCTGA
TTTGGAGTTTGATTATATCAACCCATACGATTCTTCATCTCGCATCAACTCAGTGGTCCT
TATAGAATACGCACTCCAAGGGGCCTTGTGCGCTTCTTTCCTCTTGACACTGCATTGGTT
CCCGTTTCTAGTTATGGCACCAGTAGCATACTACCATGGCAAATTGTATATGGATCGGAA
ACACCTTGTAGATGTTACCGAGATATTCCGGCAACTCAATTGGGAGAAAAAATACAGGAT
GATCAAGCTTGCATTCTACTTTAGTTTGTTTATTATAACGATCTACAGGCTTGTGATGAC
GGCTGTGACGTTATTCATTGATGAGGATGCAAATCTGGTTGACACTAGAACTATTTAGAG
TTTGCTACCAACTTTTCACACACAGATGGCTAGGAAAATGTGTAAGATGCAGTGAAGTAA
AGCTTGTGGTGTGCATCATTGAACAGCAAACCAACACTGCCAGCCTCTGAGAGAAGAATT
CAGTACATCGCTCTGGCTTTCAGAGAAAGAAGATTCAACTCCCTAGCCGGGGTACTGAAT
CTAGCATCTCAGCATTATCATTTTAACCATAAACAAGAATTGGCAAGTCAGCTGTACAAT
GTAGTTTTATGCGTTTTGAGTGTGCTCGATGACATCTGTCTAAATTTGGTAGGCGATTGA
TGCAACTTTTGGCAATCACTGATTCATACCTGCATCCAAGTAATGCTGTTGTACTCAATT
CAACACTGAATTGTCTATAAAACTGGCTCATATATGG