Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0502400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:19147384:19150955:-1 gene:Os12g0502400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoserine phosphatase (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase) (L-3-phosphoserine phosphatase). (Os12t0502400-01)
Sequence	ATGGCCAAAATGGTTAGTCAGTGTATCTCTCCGCGGCAGTCCTTTCGCGTTCCTCGTTTT TCATCAGCTCGGCCTACGCTAAGTTCACGTTTAGCAATTGGCTACGCCAACCCGTCGTTT TGCGGTGTTAAACGCTCAAATCGTCCGAGTTTTATAGCAGCAGCACTGGATGTACCAAAA AGTATGTCCTCCCCTAATTCAGAGAGCTCCCTGCCTTTGAAAGAGGTTATCTGGGCATGG TGCAATGCTGACGCGGTGTGCTTCGATGTTGACAGCACGGTCTGCTTGGACGAGGGTATC GATGAGCTCGCGGACTTCTGTGGGGCAGGCCAAGCGGTTGCTGAATGGACGGCTAAGGCG ATGACTGGGTCAGTTCCGTTTGAAAAGGCATTAGCTGCTCGGCTATCGTTGTTCAAGCCA TCTTTGGGGCAAGTTGAGGACTGCATGGAGAAGCGGCCACCAAGAATATCTCCTGGAATT GCTGAGCTTGTTAAGATGCTGAAAGCTAAAAATGTTGATGTGTACCTGGTTTCTGGAGGC TTCCGACAGATGATCAAGCCTGTTGCAATGCAGCTCGGCATTCCTCCTGAAAATATTTTT GCAAACCAGTTACTGTTTGGAACTTCTGGAGAGTATGTTGGTTTTGACCCTTCAGAGCCT ACTTCACGAAGTGGAGGCAAAGCTGTAGCAGTTCAAAACATAAGACAGAAGTGTGGTTAC AGGACACTCTTTATGGTTGGAGATGGTGCAACTGATCTTGAGGCTCGGCAACCTAATGGA GCAGACTTGTTTATCTGCTATGCTGGTGTGCAGATGAGGGAAGCGGTTGCATCAAAAGCC GATTGGTTGATCTTTGATTTTGACGAACTAATGGGCTATTTGGTTTAG

Peptide Sequence

PEP ID	Os12t0502400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:19147384:19150955:-1 gene:Os12g0502400 transcript:Os12t0502400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoserine phosphatase (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase) (L-3-phosphoserine phosphatase). (Os12t0502400-01)
Sequence	MAKMVSQCISPRQSFRVPRFSSARPTLSSRLAIGYANPSFCGVKRSNRPSFIAAALDVPK SMSSPNSESSLPLKEVIWAWCNADAVCFDVDSTVCLDEGIDELADFCGAGQAVAEWTAKA MTGSVPFEKALAARLSLFKPSLGQVEDCMEKRPPRISPGIAELVKMLKAKNVDVYLVSGG FRQMIKPVAMQLGIPPENIFANQLLFGTSGEYVGFDPSEPTSRSGGKAVAVQNIRQKCGY RTLFMVGDGATDLEARQPNGADLFICYAGVQMREAVASKADWLIFDFDELMGYLV

Transcript Sequence

Transcript ID	Os12t0502400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:19147384:19150955:-1 gene:Os12g0502400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Phosphoserine phosphatase (EC 3.1.3.3) (PSP) (O-phosphoserine phosphohydrolase) (PSPase) (L-3-phosphoserine phosphatase). (Os12t0502400-01)
Sequence	ATCCATCCGGTCACTCGCCAACTAGTATCCCCATTCGCCGCCGCCGCCGCCGCCTTCGCC GCCGGCGATACGGTGGTCAGCGCCGCCGCGGCCGCTCGTATCTAAAGGTATATGGCCAAA ATGGTTAGTCAGTGTATCTCTCCGCGGCAGTCCTTTCGCGTTCCTCGTTTTTCATCAGCT CGGCCTACGCTAAGTTCACGTTTAGCAATTGGCTACGCCAACCCGTCGTTTTGCGGTGTT AAACGCTCAAATCGTCCGAGTTTTATAGCAGCAGCACTGGATGTACCAAAAAGTATGTCC TCCCCTAATTCAGAGAGCTCCCTGCCTTTGAAAGAGGTTATCTGGGCATGGTGCAATGCT GACGCGGTGTGCTTCGATGTTGACAGCACGGTCTGCTTGGACGAGGGTATCGATGAGCTC GCGGACTTCTGTGGGGCAGGCCAAGCGGTTGCTGAATGGACGGCTAAGGCGATGACTGGG TCAGTTCCGTTTGAAAAGGCATTAGCTGCTCGGCTATCGTTGTTCAAGCCATCTTTGGGG CAAGTTGAGGACTGCATGGAGAAGCGGCCACCAAGAATATCTCCTGGAATTGCTGAGCTT GTTAAGATGCTGAAAGCTAAAAATGTTGATGTGTACCTGGTTTCTGGAGGCTTCCGACAG ATGATCAAGCCTGTTGCAATGCAGCTCGGCATTCCTCCTGAAAATATTTTTGCAAACCAG TTACTGTTTGGAACTTCTGGAGAGTATGTTGGTTTTGACCCTTCAGAGCCTACTTCACGA AGTGGAGGCAAAGCTGTAGCAGTTCAAAACATAAGACAGAAGTGTGGTTACAGGACACTC TTTATGGTTGGAGATGGTGCAACTGATCTTGAGGCTCGGCAACCTAATGGAGCAGACTTG TTTATCTGCTATGCTGGTGTGCAGATGAGGGAAGCGGTTGCATCAAAAGCCGATTGGTTG ATCTTTGATTTTGACGAACTAATGGGCTATTTGGTTTAGGTTTTTTTTTTCCTAGAAACC ACCAGTTCTTATTTTGTCTATTGATGAGTAAATAACTGTCCATGGAAGCACTTCAGAGAA TCAGAGCTACACATGTCAAGGCGTTTAACAGGGATAGTAATAACATGTGTCAAGCGAAGG TGTTTGATCTCAGTTAAAAATTCCTCTATCTTTCTATCAATTTTCCTTTTCAAGCCAATG GCACCAAGATTCCAGAGTGTCAATACTTACCTTGTGTGTTGTTTTGTGATTTATCATTGG CCTGTTCAGAACAGGGAGGATGTCACCCTAGATTGATGCCTTCACAGATGTTGTAATGTG AAAGCTTTTATAGTATGCTTGTCTTTCTTTCT