Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0502100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:19126131:19129712:-1 gene:Os12g0502100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 15, SKIPa-interacting protein 15, SKIPa-interacting protein 15 description:Similar to SKIP interacting protein 15. (Os12t0502100-01)
Sequence	ATGGCGGCGCCGAGGGAGAAGTCCGCCGCGGCGACCTCGTCGGCGGCGGCGGCGGATGCG GCGGGGGCGGGGGGTGGAGGGGATCGGTGGGGCGCGGCGGTGGGGAACCTGACGGAGCTG GGGGCGAACGTGGCGGCGCTGCAGAGGCTGCTCGCGAAGAAGGCGGTGTTCGTCGACGAG GACATCTTCTCCAAGGCCTCCCTCGCCGCCGACCAGGCCCGCACCATCAAGATTCTTGAC CAGAGGGTGCAGTCGCTGGAACGTGAACTAGATGCTGCCATTTCTGCTGCTGCCCGAGCT CGTACAGAGAAACGCCAAGCTGAAGCTGCTCAACGAGCTGCGGAGTTACGTGCGCAGGAA GTGACCAAGGAATTGGAGAACACTGCAAAAGTGTTCAAGCTACACATGGAAGAGTTGCGG GCAAAGCAAGAGGAGATTGCAAAGAAAGAAAGTGATATCAAGGTGTTAGAAGCAATAATT CGAACCCTGAGTAACAAAGATGATGGGGGATCCAGCGAATAA

Peptide Sequence

PEP ID	Os12t0502100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:19126131:19129712:-1 gene:Os12g0502100 transcript:Os12t0502100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 15, SKIPa-interacting protein 15, SKIPa-interacting protein 15 description:Similar to SKIP interacting protein 15. (Os12t0502100-01)
Sequence	MAAPREKSAAATSSAAAADAAGAGGGGDRWGAAVGNLTELGANVAALQRLLAKKAVFVDE DIFSKASLAADQARTIKILDQRVQSLERELDAAISAAARARTEKRQAEAAQRAAELRAQE VTKELENTAKVFKLHMEELRAKQEEIAKKESDIKVLEAIIRTLSNKDDGGSSE

Transcript Sequence

Transcript ID	Os12t0502100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:19126131:19129712:-1 gene:Os12g0502100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SKIP interacting protein 15, SKIPa-interacting protein 15, SKIPa-interacting protein 15 description:Similar to SKIP interacting protein 15. (Os12t0502100-01)
Sequence	GCAAAAAGTGAGGGTTTGTGAGATCGGCGGCGAGAGATGGCGGCGCCGAGGGAGAAGTCC GCCGCGGCGACCTCGTCGGCGGCGGCGGCGGATGCGGCGGGGGCGGGGGGTGGAGGGGAT CGGTGGGGCGCGGCGGTGGGGAACCTGACGGAGCTGGGGGCGAACGTGGCGGCGCTGCAG AGGCTGCTCGCGAAGAAGGCGGTGTTCGTCGACGAGGACATCTTCTCCAAGGCCTCCCTC GCCGCCGACCAGGCCCGCACCATCAAGATTCTTGACCAGAGGGTGCAGTCGCTGGAACGT GAACTAGATGCTGCCATTTCTGCTGCTGCCCGAGCTCGTACAGAGAAACGCCAAGCTGAA GCTGCTCAACGAGCTGCGGAGTTACGTGCGCAGGAAGTGACCAAGGAATTGGAGAACACT GCAAAAGTGTTCAAGCTACACATGGAAGAGTTGCGGGCAAAGCAAGAGGAGATTGCAAAG AAAGAAAGTGATATCAAGGTGTTAGAAGCAATAATTCGAACCCTGAGTAACAAAGATGAT GGGGGATCCAGCGAATAATTTCCATTCAGTAGCATTGTTTTTTTTTTCAATGGAATTTAC ATGTTCAAGTATATCATCCATGTATTAATATAAGCCCTTAGGTAACAGATTATTGTAAAT GTTCGCAACAGGACATCCAAACAGATTGAAGATGAACATTACAACTGATATGCTTGACTG TTCATCTGCC