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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0502000-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:19121770:19124386:-1 gene:Os12g0502000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to nitrilase-associated protein. (Os12t0502000-01)
Sequence

ATGGGTCGTGGTGTTAGCAGCGGGGGTGGTCAGAGTTCCCTGGGCTACCTGTTTGGTGGT
GGTGAAGCTCCGAAGTCAGCTGAGAAGCCTGCTCCAGTTCAAAAGCCTGCCCCTTCGTCC
TCTGCAGAGAAGCTGAAAGAGATCCCAGCCGGTATTCAAAGTAGTAAGGCGAACAATTAC
ATGAGGGCTGAAGGTCAAAACTGTGGAAATTTCCTTACGGACCGTCCGTCAACCAAGGTG
CAGGCTGCTCCAGGCGGTGGTTCATCACTTGACTATCTCTTCAGTGGCAACAAGGATGGC
AAGTGA

Peptide Sequence

PEP ID

Os12t0502000-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:19121770:19124386:-1 gene:Os12g0502000 transcript:Os12t0502000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to nitrilase-associated protein. (Os12t0502000-01)
Sequence

MGRGVSSGGGQSSLGYLFGGGEAPKSAEKPAPVQKPAPSSSAEKLKEIPAGIQSSKANNY
MRAEGQNCGNFLTDRPSTKVQAAPGGGSSLDYLFSGNKDGK

Transcript Sequence

Transcript ID

Os12t0502000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:19121770:19124386:-1 gene:Os12g0502000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to nitrilase-associated protein. (Os12t0502000-01)
Sequence

AGCAGCGAGCAGCGATCCCACTCCTCCTCCTCCTCCCCTTGTTCGTCGTCTCCGCGGAAT
CGATCGCGCCGCGCGCCCACGCCCTTCCTCCCTCCCGGATCCGGCGCGTAAGAGTAATTG
ACCTTTGAAGTTCTATAAGATGGGTCGTGGTGTTAGCAGCGGGGGTGGTCAGAGTTCCCT
GGGCTACCTGTTTGGTGGTGGTGAAGCTCCGAAGTCAGCTGAGAAGCCTGCTCCAGTTCA
AAAGCCTGCCCCTTCGTCCTCTGCAGAGAAGCTGAAAGAGATCCCAGCCGGTATTCAAAG
TAGTAAGGCGAACAATTACATGAGGGCTGAAGGTCAAAACTGTGGAAATTTCCTTACGGA
CCGTCCGTCAACCAAGGTGCAGGCTGCTCCAGGCGGTGGTTCATCACTTGACTATCTCTT
CAGTGGCAACAAGGATGGCAAGTGACGGTCACTCTGCTGTCCGGTTTACCATGAGCTCTG
GATGAAAGGTTTCTGCTCAACAAAAGCATGTTTTCCCATGAGTAACTAACTATCCAATGT
ATCTGCTCATGGTATGTCACAGAAACTGTTGTTATGTATGCATGTGTCTGTGCTTATTCT
GTGTTGATGTATGCGTGTGCTTATCAGCAGCTACTTGTGCAATGAACTGATGGTATGTTC
ATCCTGTTGCATGTTAGTTCATGGAACCGGGTCTTTATGCTAACATTAATGTGCTTGCTT
CTTTAATGTATAATAACTGTGTTCTAGTTGTGTCATACCCCTCGGATTGGACATGGTTGT
GGTTTGATGCTCATTGTTGAAGCAAGAAATGTCTCTGTTCTGGGTGGCATATTTGTGATA
TGTTTTCCACATGACCCATGTTCTGTGTGTTTGCTGCTTTAATGTGTAATAACTGTGTTC
TAGTTGTGTCGTACACTCGTACCCATTAGATTGGACATGGTTGTTGTTTGATGCTCATTG
TTGAAGCAAGAAATGTCTGTGTT