Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0498900-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:18954678:18955772:1 gene:Os12g0498900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0498900-01)
Sequence

ATGCTCCCCAGCTCCCAAATGGCCATACAACTCACACTCCTACTCATTTCATGTAGCCTT
TACAGTATGTATTCTTCTTCTTCTTCCTCCTCCTCCGCATCGTCGTCGTCTTCTTCTTTC
TCCACATCATCCTCTTATCTTGCATTGCTGGTTCTTGTCATCTCCACTGGCCTCTCCTTG
CTCTTCACCAACCTCAGACAGATGATCAGAGCAAGGAGCCACAGGGGTAAGCCTCACCCT
TCCATGGAGGATCAGGCTGTTCATCAAGAGGAGGAGAGCATTATTGTGCCACAAGATGAG
GTGGCCGACGATGCACCGGAGGACTTGACCGGAAGCCTATCGGAGTCTTCGGATTCTCCG
GTGAGCGAAGAGTGCACCGAGGAGGGCTCGGTATCCGATGACGGTGACGATGATGACGAC
GAGAGCCTCATTGAGATCTCCCTTGTTGATGGCCACTATTTGGGGCAAGAGAAGAAGAAA
TGTGCATGGAAGGAGCAGGACCTCCTCTCCGAGTTCTTGCCGGATTTGTTGCTTGACAAG
AGGGACTTCATGGACATCTTGTCAGAGATTGGTGAGGAAGACAACCTGATTGAGATTGAC
ATTGCAAGGGGATCCATCAAGTGCTCAAGCTTTGGCATCAAGGCATGA

Peptide Sequence

PEP ID

Os12t0498900-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:18954678:18955772:1 gene:Os12g0498900 transcript:Os12t0498900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0498900-01)
Sequence

MLPSSQMAIQLTLLLISCSLYSMYSSSSSSSSASSSSSSFSTSSSYLALLVLVISTGLSL
LFTNLRQMIRARSHRGKPHPSMEDQAVHQEEESIIVPQDEVADDAPEDLTGSLSESSDSP
VSEECTEEGSVSDDGDDDDDESLIEISLVDGHYLGQEKKKCAWKEQDLLSEFLPDLLLDK
RDFMDILSEIGEEDNLIEIDIARGSIKCSSFGIKA

Transcript Sequence

Transcript ID

Os12t0498900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:18954678:18955772:1 gene:Os12g0498900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0498900-01)
Sequence

GATAAAATATTTCCGCAGATGCATTCTTCATGGTTTTGTTGTTGTTGTTGTTGTAAAGGA
AGTGAGAGCAAGGCTAGCTCTCCCCTTCTCCTCCATGCTTGCACCATCATGGCTTCTTTC
TTCTTTAGCATCACTGCATCATTTGTGCCACTAAAGCTCCTTCCCTTGTGAGTTGTGAGC
CAATTTCTTGATGCTCCCCAGCTCCCAAATGGCCATACAACTCACACTCCTACTCATTTC
ATGTAGCCTTTACAGTATGTATTCTTCTTCTTCTTCCTCCTCCTCCGCATCGTCGTCGTC
TTCTTCTTTCTCCACATCATCCTCTTATCTTGCATTGCTGGTTCTTGTCATCTCCACTGG
CCTCTCCTTGCTCTTCACCAACCTCAGACAGATGATCAGAGCAAGGAGCCACAGGGGTAA
GCCTCACCCTTCCATGGAGGATCAGGCTGTTCATCAAGAGGAGGAGAGCATTATTGTGCC
ACAAGATGAGGTGGCCGACGATGCACCGGAGGACTTGACCGGAAGCCTATCGGAGTCTTC
GGATTCTCCGGTGAGCGAAGAGTGCACCGAGGAGGGCTCGGTATCCGATGACGGTGACGA
TGATGACGACGAGAGCCTCATTGAGATCTCCCTTGTTGATGGCCACTATTTGGGGCAAGA
GAAGAAGAAATGTGCATGGAAGGAGCAGGACCTCCTCTCCGAGTTCTTGCCGGATTTGTT
GCTTGACAAGAGGGACTTCATGGACATCTTGTCAGAGATTGGTGAGGAAGACAACCTGAT
TGAGATTGACATTGCAAGGGGATCCATCAAGTGCTCAAGCTTTGGCATCAAGGCATGAAT
CTACCAAAGGTTTGGTGAAGTTCAAAATCAAAATCTTTCTCTGCATTTGCTTCAAAGATT
TGATCAGGGAAAGGGGAGTAGGTTGTATGTACCTGGCCTACATGTTGTGCAAGGCTCTTT
GTTTTTGGCAAAGCTTAAATTTTTATTTTGTGAATCTTC