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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0498500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:18918241:18920690:-1 gene:Os12g0498500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DnaJ domain containing protein, expressed. (Os12t0498500-01)
Sequence

ATGGCTGCCGTTGGCGTCGTCTCCCCGCCGGCGCCGCCCGCCGTGGCCGCCGCCTCCACC
TCGTCCCCGCGCCGCCGCGTCCGCCTCCCCCTCGGCCGTGTCTCCTCCTCCGCGGCGTCG
TTCCGCGCCCGGTGCGCCGCCGCCGCGGAAGACGGCGGCGCCACGGCCGCCCCCGAGGAC
GCCGCGGCGGCGGCGGCGGTGGCGGAAGCCGTGGAGGGGGACCCCGAGGCCGGGACGGAC
GTCGCCGGCGGCGCCGCGACGTCGACGCGGCCGCCGTACTCGCTCATCTCCGCCGACAAC
GTGCAGAAGGCGATGCGCGGCCTCGCAATCACAGAATGTGATCATTATGGGAGGCTTGGG
ATCACCAGATCAGCTTCTACCGATGAGGTTAAAGCCGCCTACGAGAAGAAGTGCGAAGAA
CTGAATAGCAAAGGATTGGAAGAAGAGGAAATCAACAAGGAGCATGACCTCCTAAAGGAA
TCTTTTACCATACTATGGACCGAGGAAGAGAGAAGATTATACGATTGGAGTTTGGCAAGA
AGTGGAAAGCCTGAGCGATATGTCTGGCCTTTCGAAGTCGATCCCATGGAGCTAGCACCA
GATCCTCCAAAGGAACCAGAAGATGAGTTCCCAACAAAGCTGGTTGGCTACTTTTTCCTG
GCATGGTTCATACTATCTGTTGCCTTGTCAGTAACCCTCAACAGATGA

Peptide Sequence

PEP ID

Os12t0498500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:18918241:18920690:-1 gene:Os12g0498500 transcript:Os12t0498500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DnaJ domain containing protein, expressed. (Os12t0498500-01)
Sequence

MAAVGVVSPPAPPAVAAASTSSPRRRVRLPLGRVSSSAASFRARCAAAAEDGGATAAPED
AAAAAAVAEAVEGDPEAGTDVAGGAATSTRPPYSLISADNVQKAMRGLAITECDHYGRLG
ITRSASTDEVKAAYEKKCEELNSKGLEEEEINKEHDLLKESFTILWTEEERRLYDWSLAR
SGKPERYVWPFEVDPMELAPDPPKEPEDEFPTKLVGYFFLAWFILSVALSVTLNR

Transcript Sequence

Transcript ID

Os12t0498500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:18918241:18920690:-1 gene:Os12g0498500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to DnaJ domain containing protein, expressed. (Os12t0498500-01)
Sequence

ACTTTTATTTCCATCCCCACCTCCCTTATCTCCCGCGCTCCACACTCTCCACTCCCCGCC
ATGGCTGCCGTTGGCGTCGTCTCCCCGCCGGCGCCGCCCGCCGTGGCCGCCGCCTCCACC
TCGTCCCCGCGCCGCCGCGTCCGCCTCCCCCTCGGCCGTGTCTCCTCCTCCGCGGCGTCG
TTCCGCGCCCGGTGCGCCGCCGCCGCGGAAGACGGCGGCGCCACGGCCGCCCCCGAGGAC
GCCGCGGCGGCGGCGGCGGTGGCGGAAGCCGTGGAGGGGGACCCCGAGGCCGGGACGGAC
GTCGCCGGCGGCGCCGCGACGTCGACGCGGCCGCCGTACTCGCTCATCTCCGCCGACAAC
GTGCAGAAGGCGATGCGCGGCCTCGCAATCACAGAATGTGATCATTATGGGAGGCTTGGG
ATCACCAGATCAGCTTCTACCGATGAGGTTAAAGCCGCCTACGAGAAGAAGTGCGAAGAA
CTGAATAGCAAAGGATTGGAAGAAGAGGAAATCAACAAGGAGCATGACCTCCTAAAGGAA
TCTTTTACCATACTATGGACCGAGGAAGAGAGAAGATTATACGATTGGAGTTTGGCAAGA
AGTGGAAAGCCTGAGCGATATGTCTGGCCTTTCGAAGTCGATCCCATGGAGCTAGCACCA
GATCCTCCAAAGGAACCAGAAGATGAGTTCCCAACAAAGCTGGTTGGCTACTTTTTCCTG
GCATGGTTCATACTATCTGTTGCCTTGTCAGTAACCCTCAACAGATGATGAGTAGCTGTA
GTTGTAATCCAGCACTCCTTTCGGCGTCACCATGAATGCTCTGCATGACTACATGTATAC
TGATTATGGTAACTAAAGTAAAGCGCGTAAAAATCGCTGAATGCGTATGTACAGATCATG
TTTATATGTCTCTAAATCTTTCAAGGAATCGATGAGCCATTTTATACC