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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0498400-02
CDS Infomation

cds chromosome:IRGSP-1.0:12:18913299:18915653:-1 gene:Os12g0498400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Septum formation topological specificity factor MinE family protein. (Os12t0498400-01);Septum formation topological specificity factor MinE family protein. (Os12t0498400-02)
Sequence

ATGGCAATGGCGACGTCGATCTCCGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCC
CCGTCCGCCTCCGTCCTCCCCGCCCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCA
CAGTTTAGTTCATTTCCTCGTGGACGATCTTGCAACATCATGCTTACTCCTAAGCATCTA
GGCATTGAGCACCAAAGCTGTTCAAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAAT
GACTTCTCTCCTATTGCTCAAGAGGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGG
TTTCTTGATCGTCTGAAATTAGCATGGAAGATAATCTTCCCAGCACCAAGCATTAAGGAG
AACTCTAATGCAAACATCGCAAAGCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGT
GAAGTGAGTGACGAGGCAAAGAAGAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAA
TTCGTGGAGATAGAATCACGAGACAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTT
GGCACAGTATATTCTGTGACCGTTCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCT
GAAGAGCAGTACAGAGGGAAGATCGTAGGTGTTGACTTCAAGGACACTGGAGAAACATCA
GGCAGCGTCGACGTTACGTTCGATTTCTTCGTGCCCAACAAGAACTACTGA

Peptide Sequence

PEP ID

Os12t0498400-02
PEP Infomation

pep chromosome:IRGSP-1.0:12:18913299:18915653:-1 gene:Os12g0498400 transcript:Os12t0498400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Septum formation topological specificity factor MinE family protein. (Os12t0498400-01);Septum formation topological specificity factor MinE family protein. (Os12t0498400-02)
Sequence

MAMATSISAGFGGEPGAVLAPSASVLPAPRRRNPATSSKAQFSSFPRGRSCNIMLTPKHL
GIEHQSCSKSSIQTFALSRNDFSPIAQEVEGFLHNIVNMGFLDRLKLAWKIIFPAPSIKE
NSNANIAKQRLKMILFSDRCEVSDEAKKKIVENIVEALSEFVEIESRDNVQVDISTDAGL
GTVYSVTVPVRRVKPEYQESEEQYRGKIVGVDFKDTGETSGSVDVTFDFFVPNKNY

Transcript Sequence

Transcript ID

Os12t0498400-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:18913299:18915653:-1 gene:Os12g0498400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Septum formation topological specificity factor MinE family protein. (Os12t0498400-01);Septum formation topological specificity factor MinE family protein. (Os12t0498400-02)
Sequence

GGAGCAGAGACTCACTGGAGACCAAACCCTAGCTGCCATGGCAATGGCGACGTCGATCTC
CGCCGGCTTCGGCGGCGAGCCCGGCGCGGTGCTCGCCCCGTCCGCCTCCGTCCTCCCCGC
CCCGCGCCGGCGCAACCCCGCCACCAGCTCCAAGGCACAGTTTAGTTCATTTCCTCGTGG
ACGATCTTGCAACATCATGCTTACTCCTAAGCATCTAGGCATTGAGCACCAAAGCTGTTC
AAAGAGCTCCATTCAGACTTTTGCTCTTTCAAGGAATGACTTCTCTCCTATTGCTCAAGA
GGTGGAAGGCTTTCTTCACAACATTGTTAACATGGGGTTTCTTGATCGTCTGAAATTAGC
ATGGAAGATAATCTTCCCAGCACCAAGCATTAAGGAGAACTCTAATGCAAACATCGCAAA
GCAGAGGCTTAAGATGATACTGTTCTCCGACAGGTGTGAAGTGAGTGACGAGGCAAAGAA
GAAGATTGTTGAGAACATCGTTGAGGCACTCTCTGAATTCGTGGAGATAGAATCACGAGA
CAACGTCCAGGTGGATATCTCAACTGATGCTGGCCTTGGCACAGTATATTCTGTGACCGT
TCCTGTTCGCCGTGTCAAGCCTGAGTACCAGGAATCTGAAGAGCAGTACAGAGGGAAGAT
CGTAGGTGTTGACTTCAAGGACACTGGAGAAACATCAGGCAGCGTCGACGTTACGTTCGA
TTTCTTCGTGCCCAACAAGAACTACTGACCGTTGTATTCCCCTTTTGCTTCCGAGTATCC
CAGAACTCCTTGGTTAGAATGTTCAATTTGTTGAAGGCTTTCTTCGCAATCTTGGTTAGT
CTAATGTACATATCTAGGCTTTTGTTTGTCTCTGCGTTTCATGTAATTTTATTTTGAATT
TTTGTTCTGAAGGTGGCAAATATCAGTACCGTGGGGTTAGTCCAACTTGGATTTTCCGAA
GAAATGTTTATTTATAAGAAAATAACGTTGTGCGCT