Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0489800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:18369705:18373748:1 gene:Os12g0489800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR protein (Fragment). (Os12t0489800-01)
Sequence	ATGCAAATGAGATTCACTAAAATGAGCTGGGGAGCTGCTGCCCGAGGGATCCAGACAGCC ACAGGGTTTGTTACAAGCGTCAATACATGGGCTGAATTCTTCAATTGTCTGAGCTCAGCC ATTTCATCTGCATGCTCTTGGATCAACATTCATCAGAAACCACAGAACGATTTTGTAAAG GAAGAAATCCAGCATCTGCAAAGCGATTTATGGCAGCTACAGACAACTCTGCCAAAAATG CGCAACCTTGTTGAGATACTTGAGTGGCAAATCTATAAAAAACCAGCTGCAGAACTCCTC CCACATATCAAGGATGCATTGCTAGATGCTGAAGACATCATTGATGAATTTAATTACTAT GAGCTCAAGGCAAAGATAGAGGGGAGAATAGAGGAATGCCTAACATCGTCTGGATGCCAG GAATTCTATATGAGTGTCATTCGAGGAAGCTTTAACAGAGTGAAAGAAATCCAAGAGAAG CTAGACCATCTACATCGTCAGTCTATGGACTTGGGCTTGCATTGTGCAGCACAAAGATTT GACAAAATTGTTAGGCCAGAAACAAGTTCTTTTCTTAACAGTCAGATTTTTGGACGGCAA GAAGAAGAGAAAATGGTGTTGGAGTTGTTAGGAGTACAATTACAAGCTAATGCTGGCTAC AAACGCAAGCGAAGCAGTAGAGTGGAGGTCTTGCCAATTGTTGGACTGGGAGGTGTAGGA AAGACTACTTTGGCCCAACAAATTTGCAAGAATCAAATGGTGAAAGCTCACTTTGATATG ATCCTTTGGGCATGTGTATCAGATGACTTTAACGCAAAGAGGTTAACTAAAGAGGTAATC CAATCTTCCAAGAAAGAAACATCATTTGACAATTTGGATTCTCTTCAGTCTATTTTAAAA GATACTGTTGAGTTAAAAAGGTTTTTACTTGTACTAGATGACATTTGGGATGATGTCATG GCAGATGGTGGGCAAGATTGGCAAAGGTTTTGTGCACCGTTGTCAAATGCTCTTCAAGGA AGCATGATTTTGATCACCACCCGGTCACAGAAAGTTGCTGATAAGGTGCGGACAATGGAT TGTTTTCCATTAGAAGGTCTAACTGAAGATGTTTTCTGGGAATTTTTCATTGTACAAGCA TTTGGAACTGAGAGTTTATCCAAATACCCAGATCTGGAGGACATTGGTAGAAGCATAATT CTGAAATTGAAGGGTTCTCCGTTGGCTGCCAAAACTATTGGGCGTCTTTTGAGGACTAAT TTGCATGCTTCACACTGA

Peptide Sequence

PEP ID	Os12t0489800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:18369705:18373748:1 gene:Os12g0489800 transcript:Os12t0489800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR protein (Fragment). (Os12t0489800-01)
Sequence	MQMRFTKMSWGAAARGIQTATGFVTSVNTWAEFFNCLSSAISSACSWINIHQKPQNDFVK EEIQHLQSDLWQLQTTLPKMRNLVEILEWQIYKKPAAELLPHIKDALLDAEDIIDEFNYY ELKAKIEGRIEECLTSSGCQEFYMSVIRGSFNRVKEIQEKLDHLHRQSMDLGLHCAAQRF DKIVRPETSSFLNSQIFGRQEEEKMVLELLGVQLQANAGYKRKRSSRVEVLPIVGLGGVG KTTLAQQICKNQMVKAHFDMILWACVSDDFNAKRLTKEVIQSSKKETSFDNLDSLQSILK DTVELKRFLLVLDDIWDDVMADGGQDWQRFCAPLSNALQGSMILITTRSQKVADKVRTMD CFPLEGLTEDVFWEFFIVQAFGTESLSKYPDLEDIGRSIILKLKGSPLAAKTIGRLLRTN LHASH

Transcript Sequence

Transcript ID	Os12t0489800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:18369705:18373748:1 gene:Os12g0489800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to NBS-LRR protein (Fragment). (Os12t0489800-01)
Sequence	GTGTGTGTGTTTGTTGTTTATTTTCAGAAGGAGCCTTTATTGCTGTTTTTTTTCTCTCTT CCTTGCTCCTTATTCACCTGTAAGAATTGGGAGCGGCAGATTGAAGGCAAAGCGCAAGTG CTTTGCTTTTTCTTGGAGTGTTTCTCAGGAATATGTGTGAGTTAAGCTTTCAGTGAGGGT GCACCCAACATTTTAAGGAATTTTTTTTATAACTTCTACCATTCCACATTCCCAGTTTTA TCCCTGTTCTTCACACCAGTCTATGCAAATGAGATTCACTAAAATGAGCTGGGGAGCTGC TGCCCGAGGGATCCAGACAGCCACAGGGTTTGTTACAAGCGTCAATACATGGGCTGAATT CTTCAATTGTCTGAGCTCAGCCATTTCATCTGCATGCTCTTGGATCAACATTCATCAGAA ACCACAGAACGATTTTGTAAAGGAAGAAATCCAGCATCTGCAAAGCGATTTATGGCAGCT ACAGACAACTCTGCCAAAAATGCGCAACCTTGTTGAGATACTTGAGTGGCAAATCTATAA AAAACCAGCTGCAGAACTCCTCCCACATATCAAGGATGCATTGCTAGATGCTGAAGACAT CATTGATGAATTTAATTACTATGAGCTCAAGGCAAAGATAGAGGGGAGAATAGAGGAATG CCTAACATCGTCTGGATGCCAGGAATTCTATATGAGTGTCATTCGAGGAAGCTTTAACAG AGTGAAAGAAATCCAAGAGAAGCTAGACCATCTACATCGTCAGTCTATGGACTTGGGCTT GCATTGTGCAGCACAAAGATTTGACAAAATTGTTAGGCCAGAAACAAGTTCTTTTCTTAA CAGTCAGATTTTTGGACGGCAAGAAGAAGAGAAAATGGTGTTGGAGTTGTTAGGAGTACA ATTACAAGCTAATGCTGGCTACAAACGCAAGCGAAGCAGTAGAGTGGAGGTCTTGCCAAT TGTTGGACTGGGAGGTGTAGGAAAGACTACTTTGGCCCAACAAATTTGCAAGAATCAAAT GGTGAAAGCTCACTTTGATATGATCCTTTGGGCATGTGTATCAGATGACTTTAACGCAAA GAGGTTAACTAAAGAGGTAATCCAATCTTCCAAGAAAGAAACATCATTTGACAATTTGGA TTCTCTTCAGTCTATTTTAAAAGATACTGTTGAGTTAAAAAGGTTTTTACTTGTACTAGA TGACATTTGGGATGATGTCATGGCAGATGGTGGGCAAGATTGGCAAAGGTTTTGTGCACC GTTGTCAAATGCTCTTCAAGGAAGCATGATTTTGATCACCACCCGGTCACAGAAAGTTGC TGATAAGGTGCGGACAATGGATTGTTTTCCATTAGAAGGTCTAACTGAAGATGTTTTCTG GGAATTTTTCATTGTACAAGCATTTGGAACTGAGAGTTTATCCAAATACCCAGATCTGGA GGACATTGGTAGAAGCATAATTCTGAAATTGAAGGGTTCTCCGTTGGCTGCCAAAACTAT TGGGCGTCTTTTGAGGACTAATTTGCATGCTTCACACTGAAATAACATATTGCAGAGTGA ACTATGGAAGTTGGAGCAGGACAGGACAGATATTCTACCTGCCCTGCGTTTGAGTTATAT GTATTTACCACCCCATCTAAAGAGGTGTTTCTCATTTTGTGCTGTGTACCCCAAAGACTA CAGGTTTGAAAAGGATACCCTAGTCGACATATGGCTGGCAGAAGGTTTCGTTGAACATGC AAGTAGCTTTCCAACTGTAACTGTTGTGCAGCAATATTTTGAAGAGCTTCTAAGCCGATC CTTCTTTCAGAAAGTGACGCACGGCAAATATGTGATACATGACTTGATGCATGATATGGC ACAGCTAGTTTCGCAAGATGAATGCTTCATCATAAGGAATGCAAATGACCTTCGAACAAT CCCTTCCAATGTTCGCCATCTATCAATTTTCACAAAAAGATATATTGGATGCCATGATTT AATGGGACTATGCAGGTATAAGAAACTGCGCACCCTTTTGTGCAGTAAAGCTTTTATCAA AGGTGAGTTTGCTTCTGTACTTGGCAGCTGGTTTAAGGAGCTTCAACACATCCGTGTGTT GAGTTGTTCTCTTCCCATGATAGAAGATATACCTGAGGGCATCAGCAACTTAAAGCTTGT CGGCTACATTTACTTCTCAAGCCAACGTACTTTCAGCATCCTTCCTTCGTCATTTTGTTG TCTATATAACCTGAAACTCTAGATGCTTCAACATGTGTTTTCAGAAGCCTGCCTTGTGAC TTTGGAAACCTGATCAGCCTAAGGAAATTTAGAGCGAAAAATTTCAGTTATCTCCCAGGA GAGGATTCACGCATGCAGTTTCTAAGAGGAGAGAGAATCAAAGTGTTGAAATATGTAAAT CAGGTACAGGGAAGTTTGCTTGTCAATTTGCCTGGTCTCAAAAGTAAAAAGAATATTGGC CTTACTGTGTTGAAAAAGGAGAATAATCTCTACTCTCTCCATATATCTCAATTTGCAGAG GATGCTAGATATGAACAGGAACAATTGGAAGTCTGTGAAAACCTACATCCTCATCCGGAT CTTCAACATTTGGAGGTCACTGGTTACCAAGGAGAGAATTTTTGTCCTAGCTGGTTCCTG CCTGACAACTTACCAAACATGATATCGCTTATATTTGAGGAGTGCCATAATGCTAAGAAG ATATCATTGCATAGATTACCATGCACAGGATTCCAGTATTTGATTAACCTGTACATCATC GAATGCACAAATTTATCAAGCATCGAACAATTTCTGCAACCATGTCATATACCGGCTATC AAAATGATAAGCATAAAGGGATGCCAGGAGTTATCGTTGATATCAGCTGAAAGATTTGGA GGTTTTCGTTTCTTAGAAGCTTTGGTGATCCGTGATTGTCCAAGAATCAGTTGGGAAAAT GGGCTGGCATTGCCGCCCACTCTCACAAGCCTTTCGTTGGTGAGGTGTGGGGATATTTCT AAGTGGATACCTGACTGTCTACTGAACCTATCCTCCCTTGTCCGCCTGCAGTTGGTTGGG CTTTCAGGGACAATGTTTATTCCTGGGAGTATCTGGAGGAATAATCTTCCATTGCTAGAT TACTTGGAGATCTGTAATTTCCAAGAGCTTCGTTTTACTGGTGTACCAGAAGCAATTGAA GAAATAAACAATGTGCTTATTGACAAGTGCCCAATGCTGAAAGAACTAAAGCAGCCTTTC TCCAGAGGTGATGTTACCTTCTTGTGGGGGATTCCGACTAGTAAATGGTACTTGTCTTAA CTGATTCCTTTCATCGAATTACCGTGTGTTATACTAAAGATTGGGGTTTGCTAACTTTAA GTCATGTAAAAAGTTGCTAATTTTTCATCACCTAAAATTACAGATTTCTAACCC