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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0485800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:18002177:18005087:1 gene:Os12g0485800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os12t0485800-01)
Sequence

ATGGCTGGTCAACCAAGTGGTGCTGACAAAGAAGTCATCAACGAGCAAATGGTTGCAAAC
ATGTATGCCAACATGCGCTCTGAAATGAATCAACTCTACTCCAAGATCACAGAGCTGGAA
ATGGAAGTCAGTGAGCACTCCCTCGTGATCGGTGCAATCGAGCCACTTGACCCCTCGAGG
CGCTGCTACAGAATGATTGGGGGAGTGCTGGTTGAACGGACTATCAAGGAGGTCTTGCCT
GCAGTGCAACGCAACAAGGAGGGCCTCGAGGAAGTTGTTGCTCGCATGAACGAGGCACTG
GAGAAGAAGAAGAAGGAAATCACGGAGTTTGAGCTCAAGTACAAGATCAGAATCCGGAAA
GCAGATAGTGACACCCAGGAAGAAGGCAGCATGAAGGAAGGATCTGCGCAGGGTGTTCTT
GTAGGCCCTGCCTCTGGGCAGTAG

Peptide Sequence

PEP ID

Os12t0485800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:18002177:18005087:1 gene:Os12g0485800 transcript:Os12t0485800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os12t0485800-01)
Sequence

MAGQPSGADKEVINEQMVANMYANMRSEMNQLYSKITELEMEVSEHSLVIGAIEPLDPSR
RCYRMIGGVLVERTIKEVLPAVQRNKEGLEEVVARMNEALEKKKKEITEFELKYKIRIRK
ADSDTQEEGSMKEGSAQGVLVGPASGQ

Transcript Sequence

Transcript ID

Os12t0485800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:18002177:18005087:1 gene:Os12g0485800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prefoldin domain containing protein. (Os12t0485800-01)
Sequence

AGTGACCGCTGCCGACCACCGCCCGCGCCGCCGCGCAGCTGCCGACCACCGTCCACCGGA
GTTCGCCCGCCGCGGCGGCAGCCGGAAGAGGCGTATCCGCTGAGACAGCAAGGGCCTCTT
TTGTAATCTATTTATGTTTTAGTGGATTCCAAGCAAAATGGCTGGTCAACCAAGTGGTGC
TGACAAAGAAGTCATCAACGAGCAAATGGTTGCAAACATGTATGCCAACATGCGCTCTGA
AATGAATCAACTCTACTCCAAGATCACAGAGCTGGAAATGGAAGTCAGTGAGCACTCCCT
CGTGATCGGTGCAATCGAGCCACTTGACCCCTCGAGGCGCTGCTACAGAATGATTGGGGG
AGTGCTGGTTGAACGGACTATCAAGGAGGTCTTGCCTGCAGTGCAACGCAACAAGGAGGG
CCTCGAGGAAGTTGTTGCTCGCATGAACGAGGCACTGGAGAAGAAGAAGAAGGAAATCAC
GGAGTTTGAGCTCAAGTACAAGATCAGAATCCGGAAAGCAGATAGTGACACCCAGGAAGA
AGGCAGCATGAAGGAAGGATCTGCGCAGGGTGTTCTTGTAGGCCCTGCCTCTGGGCAGTA
GAAGTGATAAAATTACATTGTTCCTTATAAACTGAAATTTCTCCCTTTTGAGTCCAGTTT
TATAGGGACACGCATGATCCAATGTTCTGCTGTTATTTTTGGCAAATCTGGTTGAATTTC
CATGTTACGTGCTATGTACCATACATCTTTGACACTAGACTTTATCCAATGGTATTGTTA
TCTGACC