Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0485400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:17955781:17964284:1 gene:Os12g0485400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-T1-6 description:Similar to Cyclin T1 (Fragment). (Os12t0485400-01)
Sequence	ATGGCTATGATGCCAAGTGATTCATCACATCATGGAATTGTAGAAAATAGCCCATACAGA ACTACCCAGGGCAGGAATGAGGAGACTGGTGAACTTGGTGCTTCATGGTATTTCAGTAGA AAGGAAATAGAAGAGAATTCTCCATCCAGGAGGGATGGCATTGATTTGAAGAAAGAGTCT TACCTCCGAAAATCATATTGTACTTTTCTACAAGATTTGGGCATGAGGCTTAAAGTGCCA CAAGTCACTATTGCTACAGCTATTGTGTTCTGTCACCGTTTTTACCTTCGTCAGTCCCAT GCAAAAAATGATAGACGAACAATTGCCACAGTTTGCATGTTCTTGGCTGGAAAAGTTGAA GAGACGCCTAGGCCTTTGAAAGATGTTATTCTGGTTTCTTATGAGATTATTCATAAAAAG GATCCTGCTGCTGGTCAGAGAATCAAGCAGAAGGAAGTATATGATCAACAAAAAGAACTT ATTTTACTTGCGGAGCGAGTTGTACTTGCAACTCTTGGGTTTGATTTGAATGTGCATCAT CCATACAAGCCTTTGGTTGAAGCAATAAGAAAATTTAAAGTTGCTCAAAATGCGCTTGCT CAGGTTGCATGGAATTTTGTCAATGATGGGCTGCGTACTTCGCTTTGCCTGCAGTTCAAG CCTCATCATATTGCAGCAGGTGCTATCTTTTTGGCTGCTAAATTTCTCAAAGTGAAGCTT CCATCTGATGGTGAGAAGGTTTGGTGGCAGGAGTTTGATGTGACTCCAAGACAGCTGGAA GAAGTTAGCAATCAAATGTTGGAGCTGTATGAGCAAAACTGTGCAGCACAGGCACAACCG TCCCATGGAAATGAAGCTGAAGGGAGCTCTGCTAGTGTTCCTAATCAGCGAGTCTCTGTA AAATCCGAGGAAACACCTCTTCCTCACCAGTCGAAACAGTCAAGTTCACAGCATTCAACA GGTGCTCCAAGTCATCATGGTGTCGAGCACTCAAATCTAGAAAAGCAAACTGTGGACCAG AAAATGCTTCAAAATGACAATGGTGACCATGGGAGCAACAAAACAAGAAGCAATCAGAGT GGAAGTAGAGTTGATTTTGGTGCCAACGATGGTTTACATCATGACAAACAGTCCATGACA GAAAATAAGAATCTTCCATCACATGGCAACTCCAGTGAAATCAGAGATGTCAACCGCAAT GGCAATGATGGTACGAATGTGACATCCTTGATGGTAAATAAAATTGACAAGGATAAGGTG AAAGCACAAATGGAAAAGCAAAGGAAACTGAAAGGTGATGTTGCTAGGAAGGTAGAGGTA ATAGATGATGATGATGATCTTGAGAGGCAACTAGAACATGACATTGAATTGGCTGTTGAG GATAATAAGATAAAGCAGGAGAGGAAGCAGAGTTCCCCTCATGTTATGCATCGGGGGGAT CATAGAAATGCTGATCAAGTTACAGGCAATGGGCACCTTGGCAAGCAGAATACACCAGAG ACTGCTCAAGATGCCCCAATGGACGACATTAAAGAACAGCGCAATTCCCATGGCTCAAAG CACCATGACAGTCATGATACTGCTCATGAGCGAGGTGAAAGAGACTATAAAAGGCCTCGG CCTGAAGGTTAG

Peptide Sequence

PEP ID	Os12t0485400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:17955781:17964284:1 gene:Os12g0485400 transcript:Os12t0485400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-T1-6 description:Similar to Cyclin T1 (Fragment). (Os12t0485400-01)
Sequence	MAMMPSDSSHHGIVENSPYRTTQGRNEETGELGASWYFSRKEIEENSPSRRDGIDLKKES YLRKSYCTFLQDLGMRLKVPQVTIATAIVFCHRFYLRQSHAKNDRRTIATVCMFLAGKVE ETPRPLKDVILVSYEIIHKKDPAAGQRIKQKEVYDQQKELILLAERVVLATLGFDLNVHH PYKPLVEAIRKFKVAQNALAQVAWNFVNDGLRTSLCLQFKPHHIAAGAIFLAAKFLKVKL PSDGEKVWWQEFDVTPRQLEEVSNQMLELYEQNCAAQAQPSHGNEAEGSSASVPNQRVSV KSEETPLPHQSKQSSSQHSTGAPSHHGVEHSNLEKQTVDQKMLQNDNGDHGSNKTRSNQS GSRVDFGANDGLHHDKQSMTENKNLPSHGNSSEIRDVNRNGNDGTNVTSLMVNKIDKDKV KAQMEKQRKLKGDVARKVEVIDDDDDLERQLEHDIELAVEDNKIKQERKQSSPHVMHRGD HRNADQVTGNGHLGKQNTPETAQDAPMDDIKEQRNSHGSKHHDSHDTAHERGERDYKRPR PEG

Transcript Sequence

Transcript ID	Os12t0485400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:17955781:17964284:1 gene:Os12g0485400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIN-T1-6 description:Similar to Cyclin T1 (Fragment). (Os12t0485400-01)
Sequence	ATCCGCGAGAAGCACCCGAACCGCCGCCGCCGCCCCTCCTCCTCTCTTCCCCCTTCCGCC CTCTCAGCCCTCGCCGACGACGAGGAGGAGAAGGCGGCGGCCGCACGCACGCCGCGCGAG AGGGGCAAGCAAAGCTCGGTGGTGGTGGTGGGGGGGGGGGGGGCGGACCGCGTCGCGCCC CCGGCGCCTCGGCGCCATCCGCCCCGCCGCGGGGGGCCTCAGGCGGAGGAGGAGGAGGAG GAGGCGAAACCCTAGCGCGGGGGGAGACGAGTGCTGCTCAGGCCACTTTCAATAGATAAA GAAGTAATATCTTCATCAGTCCTTTCTCAATATAGTTGAGAGCGAGTTTACATGGCTATG ATGCCAAGTGATTCATCACATCATGGAATTGTAGAAAATAGCCCATACAGAACTACCCAG GGCAGGAATGAGGAGACTGGTGAACTTGGTGCTTCATGGTATTTCAGTAGAAAGGAAATA GAAGAGAATTCTCCATCCAGGAGGGATGGCATTGATTTGAAGAAAGAGTCTTACCTCCGA AAATCATATTGTACTTTTCTACAAGATTTGGGCATGAGGCTTAAAGTGCCACAAGTCACT ATTGCTACAGCTATTGTGTTCTGTCACCGTTTTTACCTTCGTCAGTCCCATGCAAAAAAT GATAGACGAACAATTGCCACAGTTTGCATGTTCTTGGCTGGAAAAGTTGAAGAGACGCCT AGGCCTTTGAAAGATGTTATTCTGGTTTCTTATGAGATTATTCATAAAAAGGATCCTGCT GCTGGTCAGAGAATCAAGCAGAAGGAAGTATATGATCAACAAAAAGAACTTATTTTACTT GCGGAGCGAGTTGTACTTGCAACTCTTGGGTTTGATTTGAATGTGCATCATCCATACAAG CCTTTGGTTGAAGCAATAAGAAAATTTAAAGTTGCTCAAAATGCGCTTGCTCAGGTTGCA TGGAATTTTGTCAATGATGGGCTGCGTACTTCGCTTTGCCTGCAGTTCAAGCCTCATCAT ATTGCAGCAGGTGCTATCTTTTTGGCTGCTAAATTTCTCAAAGTGAAGCTTCCATCTGAT GGTGAGAAGGTTTGGTGGCAGGAGTTTGATGTGACTCCAAGACAGCTGGAAGAAGTTAGC AATCAAATGTTGGAGCTGTATGAGCAAAACTGTGCAGCACAGGCACAACCGTCCCATGGA AATGAAGCTGAAGGGAGCTCTGCTAGTGTTCCTAATCAGCGAGTCTCTGTAAAATCCGAG GAAACACCTCTTCCTCACCAGTCGAAACAGTCAAGTTCACAGCATTCAACAGGTGCTCCA AGTCATCATGGTGTCGAGCACTCAAATCTAGAAAAGCAAACTGTGGACCAGAAAATGCTT CAAAATGACAATGGTGACCATGGGAGCAACAAAACAAGAAGCAATCAGAGTGGAAGTAGA GTTGATTTTGGTGCCAACGATGGTTTACATCATGACAAACAGTCCATGACAGAAAATAAG AATCTTCCATCACATGGCAACTCCAGTGAAATCAGAGATGTCAACCGCAATGGCAATGAT GGTACGAATGTGACATCCTTGATGGTAAATAAAATTGACAAGGATAAGGTGAAAGCACAA ATGGAAAAGCAAAGGAAACTGAAAGGTGATGTTGCTAGGAAGGTAGAGGTAATAGATGAT GATGATGATCTTGAGAGGCAACTAGAACATGACATTGAATTGGCTGTTGAGGATAATAAG ATAAAGCAGGAGAGGAAGCAGAGTTCCCCTCATGTTATGCATCGGGGGGATCATAGAAAT GCTGATCAAGTTACAGGCAATGGGCACCTTGGCAAGCAGAATACACCAGAGACTGCTCAA GATGCCCCAATGGACGACATTAAAGAACAGCGCAATTCCCATGGCTCAAAGCACCATGAC AGTCATGATACTGCTCATGAGCGAGGTGAAAGAGACTATAAAAGGCCTCGGCCTGAAGGT TAGTTTTGATGACATTGAGAGATCATTTGTGATTTTGAGCGATGTGCTGGAAAGTGAGCA CTTGGCTTGGAACTTAACATATTAAGATCAGCATATGTTACTCGAACATATGCATTTTCT GCCTGAGATCGCTGCCATGTGACATCAAAGTGGGCATATGCTGTGGAGTGACAGGCATAA GGATGCTCATGTTTTTACCCAGCTGTATACAACCTCGCAACTGACTGCAACGGGTGTTTT GCCCTCGATTTGTACTGGGGGACAGTTTGGGAAGAAACTCATGATGATAAAATCTGTGTT TCAACAAGTATTGGAGTAAATACACTGGAGAAAGCCTCTAGTTCCATTTGCGTTGAGTTC TTTCTTTCTTTTTTTGTTTTTAGGCGAATTTTCAGCGACGTTCCGTAGATTAGCTAGGGT TCAACTTTGTCCACTAGATGAATTGAATATGCTTTTGCAGGCTGTCTGCCCCTTAACTAG CTCGAGAAGTTGGCATTGGTTCATAACTTTGAAATATTTTAGCTTGTTCAGGTGGCGGTT TCTTCCCAACATTGAACCTGGATTCTCGAATGGAATGGCGTTCAAATGT