Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0485000-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:17924596:17931646:-1 gene:Os12g0485000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to O-sialoglycoprotein endopeptidase. (Os12t0485000-01);Peptidase M22, glycoprotease domain containing protein. (Os12t0485000-02)
Sequence	ATGGCGGCCACTCTTCTCCCCACCTTATCGCCGCCGGCCTCCCGCGCCGCCGCCGCCCTC CTCCTCCGGCGAGCCCCACCGTTCCCCTCACCCCTTCCCGCTCCCCTCCTCCGACTCCTC CTCGCCCCCGCCCCCTCCCCTCCGCTACGGTCCTCTCCTACCTTCCGCTCCCTCGCCACA ATGCCCTCCGCCGCCGCCGCCGCAGACCTCCTCATGCTCGGCATCGAGACCAGCTGCGAC GACACCGCCGCCGCCGTGGTTAGAGGCGATGGCGAGATCCTAAGCCAGGTGGTATCTTCC CAAGAAGATTTACTCGTGAGGTGGGGAGGCGTCGCTCCGAAGATGGCCGAGGAAGCTCAT TCTCTTGCGATTGATCAGGTTGTTCAGAAAGCACTTGATGATGCAAATGTGTCAGAAAAT GATCTTTCAGCAGTGGCTGTCACCGTAGGACCAGGACTTAGTTTATGCCTCAGAGTTGGT GTTCACAAAGCTCGAAAAATAGCGAAATCATTTCGCCTGCCTATTGTTGGAGTTCATCAT ATGGAGGCACATGCATTAGTTTCCAGGTTAGTGAACAAGGATCTTGATTTCCCATTTTTG GCCCTCCTAATTTCAGGAGGACACAATCTTCTTGTTCTTGCTCATGGACTTGGTCAATAT GTTCAACTGGGAACTACAATAGATGATGCAATTGGTGAGGCTTATGACAAGTCAGCGAGA TGGTTAGGTCTTGATATGCGGAAAGGTGGCGGTCCTGCTCTTGAACAGCTTGCCCTAGAA GGTGATCCAAATGCTGTTAAGTTTAGTGTTCCAATGCGACAACACAAAGATTGCAATTTC TCTTATGCTGGTCTGAAGACTCAAGTTCGATTGGCTATTGAATCCAGAAACATATCAACA GATGATATTCCTATTTCATCCGCGACAAAAGATGACAGACAAATAAGGGCGAACATTGCT GCCTCTTTTCAGCGAGTTGCTGTTTTACATTTGGAAGAAAGATGCCAGCGAGCAGTTGAA TGGGCATTGAAGATGGAGCCTTCTATTAAATACTTTGTTGTTTCAGGAGGTGTTGCATCA AACCAGTATGTCAGAACTCATTTGAATCAGATCGCTGAGAAGAATGGCCTACAGCTCGTA TGCCCTCCCCCAAAGCTTTGCACTGACAATGGTGTCATGATTGCTTGGACTGGTATTGAG CATTTCATTGCAGGCAGATTTGATGATCCTCCTGCTGTTGATGAGCCTGATGATATGCAG TATGACCTGCGTCCAAGGTGGCCTCTTGGTGAGGAATATTCAGAAGGAAGAAGTGCTTCT CGGTCAATGAAAACTGCTCGAGTCCATCCATCACTCACATCGATGATACAGGGTTCTGTT CATTAG

Peptide Sequence

PEP ID	Os12t0485000-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:17924596:17931646:-1 gene:Os12g0485000 transcript:Os12t0485000-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to O-sialoglycoprotein endopeptidase. (Os12t0485000-01);Peptidase M22, glycoprotease domain containing protein. (Os12t0485000-02)
Sequence	MAATLLPTLSPPASRAAAALLLRRAPPFPSPLPAPLLRLLLAPAPSPPLRSSPTFRSLAT MPSAAAAADLLMLGIETSCDDTAAAVVRGDGEILSQVVSSQEDLLVRWGGVAPKMAEEAH SLAIDQVVQKALDDANVSENDLSAVAVTVGPGLSLCLRVGVHKARKIAKSFRLPIVGVHH MEAHALVSRLVNKDLDFPFLALLISGGHNLLVLAHGLGQYVQLGTTIDDAIGEAYDKSAR WLGLDMRKGGGPALEQLALEGDPNAVKFSVPMRQHKDCNFSYAGLKTQVRLAIESRNIST DDIPISSATKDDRQIRANIAASFQRVAVLHLEERCQRAVEWALKMEPSIKYFVVSGGVAS NQYVRTHLNQIAEKNGLQLVCPPPKLCTDNGVMIAWTGIEHFIAGRFDDPPAVDEPDDMQ YDLRPRWPLGEEYSEGRSASRSMKTARVHPSLTSMIQGSVH

Transcript Sequence

Transcript ID	Os12t0485000-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:17924596:17931646:-1 gene:Os12g0485000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to O-sialoglycoprotein endopeptidase. (Os12t0485000-01);Peptidase M22, glycoprotease domain containing protein. (Os12t0485000-02)
Sequence	AGTGTAACCCGAGCTAGAGTGGAATGGCGGCCACTCTTCTCCCCACCTTATCGCCGCCGG CCTCCCGCGCCGCCGCCGCCCTCCTCCTCCGGCGAGCCCCACCGTTCCCCTCACCCCTTC CCGCTCCCCTCCTCCGACTCCTCCTCGCCCCCGCCCCCTCCCCTCCGCTACGGTCCTCTC CTACCTTCCGCTCCCTCGCCACAATGCCCTCCGCCGCCGCCGCCGCAGACCTCCTCATGC TCGGCATCGAGACCAGCTGCGACGACACCGCCGCCGCCGTGGTTAGAGGCGATGGCGAGA TCCTAAGCCAGGTGGTATCTTCCCAAGAAGATTTACTCGTGAGGTGGGGAGGCGTCGCTC CGAAGATGGCCGAGGAAGCTCATTCTCTTGCGATTGATCAGGTTGTTCAGAAAGCACTTG ATGATGCAAATGTGTCAGAAAATGATCTTTCAGCAGTGGCTGTCACCGTAGGACCAGGAC TTAGTTTATGCCTCAGAGTTGGTGTTCACAAAGCTCGAAAAATAGCGAAATCATTTCGCC TGCCTATTGTTGGAGTTCATCATATGGAGGCACATGCATTAGTTTCCAGGTTAGTGAACA AGGATCTTGATTTCCCATTTTTGGCCCTCCTAATTTCAGGAGGACACAATCTTCTTGTTC TTGCTCATGGACTTGGTCAATATGTTCAACTGGGAACTACAATAGATGATGCAATTGGTG AGGCTTATGACAAGTCAGCGAGATGGTTAGGTCTTGATATGCGGAAAGGTGGCGGTCCTG CTCTTGAACAGCTTGCCCTAGAAGGTGATCCAAATGCTGTTAAGTTTAGTGTTCCAATGC GACAACACAAAGATTGCAATTTCTCTTATGCTGGTCTGAAGACTCAAGTTCGATTGGCTA TTGAATCCAGAAACATATCAACAGATGATATTCCTATTTCATCCGCGACAAAAGATGACA GACAAATAAGGGCGAACATTGCTGCCTCTTTTCAGCGAGTTGCTGTTTTACATTTGGAAG AAAGATGCCAGCGAGCAGTTGAATGGGCATTGAAGATGGAGCCTTCTATTAAATACTTTG TTGTTTCAGGAGGTGTTGCATCAAACCAGTATGTCAGAACTCATTTGAATCAGATCGCTG AGAAGAATGGCCTACAGCTCGTATGCCCTCCCCCAAAGCTTTGCACTGACAATGGTGTCA TGATTGCTTGGACTGGTATTGAGCATTTCATTGCAGGCAGATTTGATGATCCTCCTGCTG TTGATGAGCCTGATGATATGCAGTATGACCTGCGTCCAAGGTGGCCTCTTGGTGAGGAAT ATTCAGAAGGAAGAAGTGCTTCTCGGTCAATGAAAACTGCTCGAGTCCATCCATCACTCA CATCGATGATACAGGGTTCTGTTCATTAGTAGTTTAGTGGAAATTGCAGGAGCATTTGCC CATTGAAGCTAGTGCTTTCATGTGCCATGTGGTTTATCAGTTTCAGTTTTAGTGATTACT GAGGCGCGGCTTGTTTCGAGTGAATAACTCGCAATTTTCAGTCGCAGTTTAGTTGAAAAC CATGGGGCCTGTGAGCAGTACAATTTGTGTGAAACTTCGATGATGGTTTTGGGGCTTTGG GCTTGTGCAACTGATGTTAGTGCTTAATGCCTGAAATTCAAAATGCTTTGT