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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0484700-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:17907213:17909016:-1 gene:Os12g0484700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yippee-like protein CG15309. (Os12t0484700-01)
Sequence

ATGGTGTTCATGGCGGAGCTGGTGGGTCCGCGGGTGTACAGCTGCTGCAACTGCCGGAAC
CACGTCTGCCTCCACGACGACATCATCTCCAAGGCTTTTCAGGGGAGGAATGGCCGTGCC
TTTCTGTTCTCTCATGCCATGAATGTTGTTGTGGGCGCGAAGGAGGACAGGCAACTTATG
ACGGGGCTTCACACTGTTGCTGATATCTATTGCAATGATTGCCGGGAGGTGTTGGGCTGG
AAGTACGAGAGAGCCTATGAGGAAACACAGAAGTACAAGGAAGGGAAGTTCATATTTGAG
AAGTCAAAAATCGTCAAAGAGAACTGGTAG

Peptide Sequence

PEP ID

Os12t0484700-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:17907213:17909016:-1 gene:Os12g0484700 transcript:Os12t0484700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yippee-like protein CG15309. (Os12t0484700-01)
Sequence

MVFMAELVGPRVYSCCNCRNHVCLHDDIISKAFQGRNGRAFLFSHAMNVVVGAKEDRQLM
TGLHTVADIYCNDCREVLGWKYERAYEETQKYKEGKFIFEKSKIVKENW

Transcript Sequence

Transcript ID

Os12t0484700-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:17907213:17909016:-1 gene:Os12g0484700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Yippee-like protein CG15309. (Os12t0484700-01)
Sequence

TTTCTTCTCCCAAACTCCGGCGACTCCTCCGCTAATCCCCTCCGGCGCCGCCTCCTCTCC
GCTCCCCGCGCCCCCCACCTCCGGTCACGCCCGATCGGATTGGTTGAGTTGCCTCGAGGG
ATTTTTGCTCTCGAGGTATGGTGTTCATGGCGGAGCTGGTGGGTCCGCGGGTGTACAGCT
GCTGCAACTGCCGGAACCACGTCTGCCTCCACGACGACATCATCTCCAAGGCTTTTCAGG
GGAGGAATGGCCGTGCCTTTCTGTTCTCTCATGCCATGAATGTTGTTGTGGGCGCGAAGG
AGGACAGGCAACTTATGACGGGGCTTCACACTGTTGCTGATATCTATTGCAATGATTGCC
GGGAGGTGTTGGGCTGGAAGTACGAGAGAGCCTATGAGGAAACACAGAAGTACAAGGAAG
GGAAGTTCATATTTGAGAAGTCAAAAATCGTCAAAGAGAACTGGTAGAATCCAAAAGATT
AGGCACTCCAAACTTTCTTTAGAGGATGAAACATTCACTGTTCCAAGGTTATCAGTGTGT
TCTGGTTCTTTATGTCTTTGTAAATATCAGTCATCCACAAGTTTTAATCTTAAGTCTGCC
TGTTCTTGCCTTGCCGTGAAGTGTAAATTGTTCTTGCTCCCGTTTCTTTCTGTGAATAAC
ATATGGCCTGTGGGTATTTGTTCTTGAACCATGTGTGCTAATGTGCGTAATTTTATAGGT
ACTAAAAGAATGTTTGTATCTTTCTCCTGCACAAGAATACCGCGTGGAGATTTACAGTCA
AATATAATCTGACATGATTTAATCAAAATTTGTTGGGAAGTTGTGAAGTAAG