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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0483450-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:17823178:17823945:-1 gene:Os12g0483450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1719, Oryza sativa domain containing protein. (Os12t0483450-00)
Sequence

ATGGCGGCAGAGATGATCAGCTCCGCTGTCGTGGGAGAAACGCTGAACAGGGTCGTGTCG
AGGCTGGTCTCCGGCGGCAGCCACAACGACGACGGGATGAGGGGTAATAGCATGGAGAGG
CTGGAGATGGCGCACAGCAGGATGGAAGCCGTCCTCGACCTCTCGACGCGGTGGCCGGTC
ACCGACGTGTCCCTGCTCCGGTGGCGACGCAGGCTGAAGCGCGCCACGGAGGAGTGCGAC
GGCGCGCTCCGGCGCCGGCGCCGCAAGCAGCGCGCCGTCGAGGACGAGGCGGCGGCGGTG
AGCCGGTCCTCGTTCCCGCGACGCGTCGCCCACGCGGCTAGGTCGTACGTCGTCTCGGCG
CTCATCGGCGGCTACGACTCGTCGTCGAGCTCAGACGTCCGGAGATTCGAGAGGGTCGCG
GACGGAGCGAGCGAGTTCCTGAAGCTAGTCGAGCTTGGCGGGACAACACGGCCACGGCTT
GCGTTCTTCGACGACCCTCTCATCGGCCGTATCATGGCCGGCGAGACGCTGAGGTACCTG
GCTCTCCGGGGCAGCAGGTTATACTACGTGGGCGCGCGGCCGATGAGCTTCGAGGAGCGC
GGGGTGGAAGCCATGGTGGGGTTCGTCGTGCAGGATTTTGAGGCGCCGTCGAGGAGTTTC
AGCGTGGGGCTCATGATGCGCCTCTCCGAGAGTACCGACGTGCTTGGCACCATGATCGAT
TGTATGCAGTCAGTTGTCACGTCCCACTTCAGGTCAGCAATTCTTTAA

Peptide Sequence

PEP ID

Os12t0483450-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:17823178:17823945:-1 gene:Os12g0483450 transcript:Os12t0483450-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1719, Oryza sativa domain containing protein. (Os12t0483450-00)
Sequence

MAAEMISSAVVGETLNRVVSRLVSGGSHNDDGMRGNSMERLEMAHSRMEAVLDLSTRWPV
TDVSLLRWRRRLKRATEECDGALRRRRRKQRAVEDEAAAVSRSSFPRRVAHAARSYVVSA
LIGGYDSSSSSDVRRFERVADGASEFLKLVELGGTTRPRLAFFDDPLIGRIMAGETLRYL
ALRGSRLYYVGARPMSFEERGVEAMVGFVVQDFEAPSRSFSVGLMMRLSESTDVLGTMID
CMQSVVTSHFRSAIL

Transcript Sequence

Transcript ID

Os12t0483450-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:17823178:17823945:-1 gene:Os12g0483450 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF1719, Oryza sativa domain containing protein. (Os12t0483450-00)
Sequence

ATGGCGGCAGAGATGATCAGCTCCGCTGTCGTGGGAGAAACGCTGAACAGGGTCGTGTCG
AGGCTGGTCTCCGGCGGCAGCCACAACGACGACGGGATGAGGGGTAATAGCATGGAGAGG
CTGGAGATGGCGCACAGCAGGATGGAAGCCGTCCTCGACCTCTCGACGCGGTGGCCGGTC
ACCGACGTGTCCCTGCTCCGGTGGCGACGCAGGCTGAAGCGCGCCACGGAGGAGTGCGAC
GGCGCGCTCCGGCGCCGGCGCCGCAAGCAGCGCGCCGTCGAGGACGAGGCGGCGGCGGTG
AGCCGGTCCTCGTTCCCGCGACGCGTCGCCCACGCGGCTAGGTCGTACGTCGTCTCGGCG
CTCATCGGCGGCTACGACTCGTCGTCGAGCTCAGACGTCCGGAGATTCGAGAGGGTCGCG
GACGGAGCGAGCGAGTTCCTGAAGCTAGTCGAGCTTGGCGGGACAACACGGCCACGGCTT
GCGTTCTTCGACGACCCTCTCATCGGCCGTATCATGGCCGGCGAGACGCTGAGGTACCTG
GCTCTCCGGGGCAGCAGGTTATACTACGTGGGCGCGCGGCCGATGAGCTTCGAGGAGCGC
GGGGTGGAAGCCATGGTGGGGTTCGTCGTGCAGGATTTTGAGGCGCCGTCGAGGAGTTTC
AGCGTGGGGCTCATGATGCGCCTCTCCGAGAGTACCGACGTGCTTGGCACCATGATCGAT
TGTATGCAGTCAGTTGTCACGTCCCACTTCAGGTCAGCAATTCTTTAA