Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0481100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:17684802:17694915:-1 gene:Os12g0481100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 28 description:Similar to cDNA clone:J033010C22, full insert sequence. (Os12t0481100-01)
Sequence	ATGGACGCCGACTTCCGGTTCGACCCGGACGGCTCCGACGACGACGGGGCGGCGGCCTCG GCGGCCGCGGGGCGGAGGAAGCCGGCGCAGTCGCCGTGGGAGTTCTCGTCCTACGCGGAG TCCGTGGCGGCGGAGCACGCGCGCCGCCGCACCACCTCCATCGACGAGAAGATCTCCCAG GCCCTGAGCGGTAGCCGCCGCGGCGGGAAGCCTTCTATCCCCGACGGTGACTCCGAGGGC GACGAGGATGATTCGGAGGTGGAGGATGATAGTGAGGAGGACGACAAGGAGGTGGTGGAA GGGGAGATCGACGACGAGGAGGACGAGGTTGAGGAGAGCGAGGATGATGACGAGGGGGTA GAGGTGAGCGATGAGGAGGTGGAGGAGTTGGAGGAGGGCAAAGGGGAGGAGAAGAGTGAC GAAGTGGAAGAGGGCGAGGAAGGGCAAGATGGGGAAGAGGAGGAGAAAGAGGAAGGAGAT GAGGAAGCTGCAGAAGAGGAAGAAGAAACGGACAAGAAGAGTGGTGTAGTGGACCCTTCT AAATTTTTTGCATCTTCCGAAGGAGCGTCGTTCCATGCAAATTCATTTCTTGAGCTGAAC TTGTCAAGGCCACTTCTTCGAGCCTGTGAAGCACTCGGCTACCAAAAACCAACGCCAATC CAGGCTGCATGCATACCATTAGCATTAACTGGACGGGATATATGTGGCAGTGCTATAACA GGATCTGGGAAGACAGCTGCTTTCTCATTACCTGTGCTGGAACGTCTACTTTTCCGGCCC AAACGTGTACCTGCAATTAGGGTGCTTATCCTTACTCCAACAAGAGAGTTGGCTGCTCAG GTCCATAGTATGATCGAGAAATTAGCTCAATTTACTGATATCAGATGTTGTCTGATTGTT GGTGGACTTTCAACTAAGGTACAAGAGGTAGCTTTAAGGTCAATGCCTGACATTGTTGTA GCTACTCCTGGGCGTATAATAGATCATCTACGCAATTCACTTTCCGTTGGGCTTGAAGAT CTTGCAATTTTGATCCTTGATGAGGCTGATCGTTTGCTAGAACTCGGTTTCAGTGCTGAA ATTCAGGAACTGATTCGCATGTGTCCTAGAAGAAGACAGACAATGCTATTTTCTGCTACG ATGACAGAAGAAATTAATGAGCTTGTGACACTTTCACTGAACAAACCAGTCCGTCTTGAA GCTGATCCTTCTCTGAAACGGCCTGCAACATTGACAGAAGAGGTGGTTAGAATACGAAGA GCACGCGAAGCAAATCAAGAAGCTGTTCTGCTTGCTCTCTGTTTGAAGACTTTCAAGGAT AAAGTAATCATTTTCAGTGGCACAAAGCATTCTGCTCACAGATTGAAAATAATATTTGGT CTCTCCGGGATGAAAGCTGCTGAACTTCATGGCAACCTTACGCAGGCCCAGCGGCTTGAG GCTTTAGAGCTTTTCAAAAAGCAAGAAGTGGACTTCCTGATTGCAACTGATGTTGCAGCT CGTGGGATTGACATCGTTGGTGTTCGAACTGTAATAAATTTTTCCTGCCCGCGTGATGCC AGAACTTATCTACATCGTGTTGGACGCACTGCTCGTGCAGGCAGAGAAGGATATGCTGTG ACATTTGTTACTGACGATGATAGGTCCCTCTTGAAAGCTATTGCAAAGAAAGCTGGTTCA CAGCTGAAAAGTCGCATTGTTGCAGAGAAGCCTGTGGCTGAGTGTGCAAAATTGATTGAG GAACTTGAAGATCAAATTTCTACCATAATTCAAGAAGAAAGGGAGGAAAGAATATTAAGA AAAGCTGAAATGGAAGCTACAAAGGCAGAAAATATGATAGCTCATAAGGATGAGATATAC TCAAGACCAAAGAGAACCTGGTTTGCTACTGAGAAGGAAAAGAAACTTTTGGCAAAGGCT GCTAAAGAATCCACGAGTCAAGGTAAGAGTAATTCTGGAGTTATTAGCGCTCAGCAAGCT GAAGATCTTCGTCTGAAGGAGAAAAAGAGAAGGGAGCGTGAGAAAAATCTACCTAGGAAG AAACGGAGACGGTTAGAGGCAGAACGGGAGATGTTAGAAGATGAGAGCGAAGATGAGGAA GAAGCTAAGGAAAGCAAAGGTGGGAAAAAAGAAAAGAAAGGTCAATCGCTAGTCGATGTG GCTTATCGTAGAGCAAAATCAATGAAGGCCAGCGGTAAAAGGGGTGCTGGCACTGGCAAA GGAAAGAATGATAAAAAGGCAAAACAACATTCTGGAAAGGGCCCAACTAGGCAAGAGGAG ATGCAAGAGTTGTTCCAGAATGATATGAGTGAATGGAAGCAGGGCCGCTCCTTAAAGAAA AATAATGTTATGCGAAAGAAATCGAAAAATTCTTTTAAGAGCAAATCCAGGTACAACCGC CGAAAGTAG

Peptide Sequence

PEP ID	Os12t0481100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:17684802:17694915:-1 gene:Os12g0481100 transcript:Os12t0481100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 28 description:Similar to cDNA clone:J033010C22, full insert sequence. (Os12t0481100-01)
Sequence	MDADFRFDPDGSDDDGAAASAAAGRRKPAQSPWEFSSYAESVAAEHARRRTTSIDEKISQ ALSGSRRGGKPSIPDGDSEGDEDDSEVEDDSEEDDKEVVEGEIDDEEDEVEESEDDDEGV EVSDEEVEELEEGKGEEKSDEVEEGEEGQDGEEEEKEEGDEEAAEEEEETDKKSGVVDPS KFFASSEGASFHANSFLELNLSRPLLRACEALGYQKPTPIQAACIPLALTGRDICGSAIT GSGKTAAFSLPVLERLLFRPKRVPAIRVLILTPTRELAAQVHSMIEKLAQFTDIRCCLIV GGLSTKVQEVALRSMPDIVVATPGRIIDHLRNSLSVGLEDLAILILDEADRLLELGFSAE IQELIRMCPRRRQTMLFSATMTEEINELVTLSLNKPVRLEADPSLKRPATLTEEVVRIRR AREANQEAVLLALCLKTFKDKVIIFSGTKHSAHRLKIIFGLSGMKAAELHGNLTQAQRLE ALELFKKQEVDFLIATDVAARGIDIVGVRTVINFSCPRDARTYLHRVGRTARAGREGYAV TFVTDDDRSLLKAIAKKAGSQLKSRIVAEKPVAECAKLIEELEDQISTIIQEEREERILR KAEMEATKAENMIAHKDEIYSRPKRTWFATEKEKKLLAKAAKESTSQGKSNSGVISAQQA EDLRLKEKKRREREKNLPRKKRRRLEAEREMLEDESEDEEEAKESKGGKKEKKGQSLVDV AYRRAKSMKASGKRGAGTGKGKNDKKAKQHSGKGPTRQEEMQELFQNDMSEWKQGRSLKK NNVMRKKSKNSFKSKSRYNRRK

Transcript Sequence

Transcript ID	Os12t0481100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:17684802:17694915:-1 gene:Os12g0481100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RNA helicase 28 description:Similar to cDNA clone:J033010C22, full insert sequence. (Os12t0481100-01)
Sequence	CTCGATTAAACCCTCGCCTCCCGCCGCCGCACGCCGGAGGCGACCACCACCACCACCAAC CCCCGCCGCTCGCCGCCTCCTCCTCTCCCGCGGCATGGACGCCGACTTCCGGTTCGACCC GGACGGCTCCGACGACGACGGGGCGGCGGCCTCGGCGGCCGCGGGGCGGAGGAAGCCGGC GCAGTCGCCGTGGGAGTTCTCGTCCTACGCGGAGTCCGTGGCGGCGGAGCACGCGCGCCG CCGCACCACCTCCATCGACGAGAAGATCTCCCAGGCCCTGAGCGGTAGCCGCCGCGGCGG GAAGCCTTCTATCCCCGACGGTGACTCCGAGGGCGACGAGGATGATTCGGAGGTGGAGGA TGATAGTGAGGAGGACGACAAGGAGGTGGTGGAAGGGGAGATCGACGACGAGGAGGACGA GGTTGAGGAGAGCGAGGATGATGACGAGGGGGTAGAGGTGAGCGATGAGGAGGTGGAGGA GTTGGAGGAGGGCAAAGGGGAGGAGAAGAGTGACGAAGTGGAAGAGGGCGAGGAAGGGCA AGATGGGGAAGAGGAGGAGAAAGAGGAAGGAGATGAGGAAGCTGCAGAAGAGGAAGAAGA AACGGACAAGAAGAGTGGTGTAGTGGACCCTTCTAAATTTTTTGCATCTTCCGAAGGAGC GTCGTTCCATGCAAATTCATTTCTTGAGCTGAACTTGTCAAGGCCACTTCTTCGAGCCTG TGAAGCACTCGGCTACCAAAAACCAACGCCAATCCAGGCTGCATGCATACCATTAGCATT AACTGGACGGGATATATGTGGCAGTGCTATAACAGGATCTGGGAAGACAGCTGCTTTCTC ATTACCTGTGCTGGAACGTCTACTTTTCCGGCCCAAACGTGTACCTGCAATTAGGGTGCT TATCCTTACTCCAACAAGAGAGTTGGCTGCTCAGGTCCATAGTATGATCGAGAAATTAGC TCAATTTACTGATATCAGATGTTGTCTGATTGTTGGTGGACTTTCAACTAAGGTACAAGA GGTAGCTTTAAGGTCAATGCCTGACATTGTTGTAGCTACTCCTGGGCGTATAATAGATCA TCTACGCAATTCACTTTCCGTTGGGCTTGAAGATCTTGCAATTTTGATCCTTGATGAGGC TGATCGTTTGCTAGAACTCGGTTTCAGTGCTGAAATTCAGGAACTGATTCGCATGTGTCC TAGAAGAAGACAGACAATGCTATTTTCTGCTACGATGACAGAAGAAATTAATGAGCTTGT GACACTTTCACTGAACAAACCAGTCCGTCTTGAAGCTGATCCTTCTCTGAAACGGCCTGC AACATTGACAGAAGAGGTGGTTAGAATACGAAGAGCACGCGAAGCAAATCAAGAAGCTGT TCTGCTTGCTCTCTGTTTGAAGACTTTCAAGGATAAAGTAATCATTTTCAGTGGCACAAA GCATTCTGCTCACAGATTGAAAATAATATTTGGTCTCTCCGGGATGAAAGCTGCTGAACT TCATGGCAACCTTACGCAGGCCCAGCGGCTTGAGGCTTTAGAGCTTTTCAAAAAGCAAGA AGTGGACTTCCTGATTGCAACTGATGTTGCAGCTCGTGGGATTGACATCGTTGGTGTTCG AACTGTAATAAATTTTTCCTGCCCGCGTGATGCCAGAACTTATCTACATCGTGTTGGACG CACTGCTCGTGCAGGCAGAGAAGGATATGCTGTGACATTTGTTACTGACGATGATAGGTC CCTCTTGAAAGCTATTGCAAAGAAAGCTGGTTCACAGCTGAAAAGTCGCATTGTTGCAGA GAAGCCTGTGGCTGAGTGTGCAAAATTGATTGAGGAACTTGAAGATCAAATTTCTACCAT AATTCAAGAAGAAAGGGAGGAAAGAATATTAAGAAAAGCTGAAATGGAAGCTACAAAGGC AGAAAATATGATAGCTCATAAGGATGAGATATACTCAAGACCAAAGAGAACCTGGTTTGC TACTGAGAAGGAAAAGAAACTTTTGGCAAAGGCTGCTAAAGAATCCACGAGTCAAGGTAA GAGTAATTCTGGAGTTATTAGCGCTCAGCAAGCTGAAGATCTTCGTCTGAAGGAGAAAAA GAGAAGGGAGCGTGAGAAAAATCTACCTAGGAAGAAACGGAGACGGTTAGAGGCAGAACG GGAGATGTTAGAAGATGAGAGCGAAGATGAGGAAGAAGCTAAGGAAAGCAAAGGTGGGAA AAAAGAAAAGAAAGGTCAATCGCTAGTCGATGTGGCTTATCGTAGAGCAAAATCAATGAA GGCCAGCGGTAAAAGGGGTGCTGGCACTGGCAAAGGAAAGAATGATAAAAAGGCAAAACA ACATTCTGGAAAGGGCCCAACTAGGCAAGAGGAGATGCAAGAGTTGTTCCAGAATGATAT GAGTGAATGGAAGCAGGGCCGCTCCTTAAAGAAAAATAATGTTATGCGAAAGAAATCGAA AAATTCTTTTAAGAGCAAATCCAGGTACAACCGCCGAAAGTAGAAGACCCGCTAACTTGT AGTAGCGTGTTTTCCTCACTGGGAATTTATTGCATTCCCTTGTATCAATTTTGACCGACT GATCCTGAAGAAATGTCAGGATATGTTGTGCCCATCTTGTATTTACTAGTTATATACAAT TTTCTCATATCGTGCATTAATCACATTCGTCATGATTTTTAATGT