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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0480100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:17624501:17625313:1 gene:Os12g0480100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to One helix protein (OHP). (Os12t0480100-01)
Sequence

ATGACGTTATTAATCTCCATAGTTCAACCACCATCCCTCCTGGCAATCCAATTCCAACCC
CTCCAGAACAACAGATTCAAGAGGAATAATCCTGCCATCTCAGCAAGAGCAAGAACTGTC
AGAGCTAGGGCAGCAGAGCTCCCAGCAGGAGTTGTGGTGCCAAGGGAGCAGCCCAAGCTG
AGTGAGCCATTCCTAGGGTTCACCAAGACTGCAGAGGTTTGGAACTCTAGGGCCTGCATG
ATTGGTCTCATTGGGGTTTTCATTGTGGAGCTGGTGCTGAGCAAGGGTGTTCTTCAGACA
ATTGGACTGGAAGTGGGGAAAGGACTCGATCTTCCACTGTAG

Peptide Sequence

PEP ID

Os12t0480100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:17624501:17625313:1 gene:Os12g0480100 transcript:Os12t0480100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to One helix protein (OHP). (Os12t0480100-01)
Sequence

MTLLISIVQPPSLLAIQFQPLQNNRFKRNNPAISARARTVRARAAELPAGVVVPREQPKL
SEPFLGFTKTAEVWNSRACMIGLIGVFIVELVLSKGVLQTIGLEVGKGLDLPL

Transcript Sequence

Transcript ID

Os12t0480100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:17624501:17625313:1 gene:Os12g0480100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to One helix protein (OHP). (Os12t0480100-01)
Sequence

GTTAGCAGCAGATTCAACCAAGCAATGACGTTATTAATCTCCATAGTTCAACCACCATCC
CTCCTGGCAATCCAATTCCAACCCCTCCAGAACAACAGATTCAAGAGGAATAATCCTGCC
ATCTCAGCAAGAGCAAGAACTGTCAGAGCTAGGGCAGCAGAGCTCCCAGCAGGAGTTGTG
GTGCCAAGGGAGCAGCCCAAGCTGAGTGAGCCATTCCTAGGGTTCACCAAGACTGCAGAG
GTTTGGAACTCTAGGGCCTGCATGATTGGTCTCATTGGGGTTTTCATTGTGGAGCTGGTG
CTGAGCAAGGGTGTTCTTCAGACAATTGGACTGGAAGTGGGGAAAGGACTCGATCTTCCA
CTGTAGTTCTTCAGGAATTTGTGGTTGATGTTCAGGGACTAGAGTGACCTGTTTTTCTCT
TCAGAAAGATTGGATATGTCAATTAATGCTATGCACTAAATATGTACTCCTATATGCTAA
GCCCCTTACATTCCGTTGTTATTTAGCATATTCTGTCGTTGCCACAGTAATCAACAAGAT
TTTCATCGCAAGATATTCCTAACGACGGTGAATTTGTGTT