Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0479900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:17612395:17618588:1 gene:Os12g0479900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to aminopeptidase. (Os12t0479900-01)
Sequence	ATGGCGGAGGAGGAGGAGGAGAAGAGGAGGTTGGGGGAGGGGGAGGGGGGTGGGGTGATG AGGGACGCGAGGAAGGACGGGGTGGTGAGGGAGGTGATACGGATGGAGAGGGAGGCGGTC ATCCCCGTGCTCAAGCCCAAGCTCGTCATGAAGCTCGCCTACCTCATCGAGCATGATTTG GACCGTTCTGAGTTCTTGAAGCTATGTAAGAAGATCGAGTACACCATCCGAGCTTGGTAT CTTCTCCAATTCGAGGATTTAATGCAATTGTATTCTCTGTTTGATCCTGTTTCTGGCGAG AAGAGGCTGGAGCAGCAGAACCTGACACCTGAAGAGATTGAAACTCTGGAGTTCAATTTC ATGACATATCTTTTCCAGGTTATGGAAAAGAGCAACTTCAAGTTGTTATCTGATGAAGAG TATGATGTTGCACAATCTGGAAAATATCTTCTAAACCTTCCCATAAAAGTTGATGAGCCT AAGCTAGACAGTAAGCTGTTGTCAACATACTTTAAAGAGCATCCACATGATAATCTGCCT TCATTTGCTAATAAGTATATTATCTTTCGTCGGGGCATTGGAATTGACCGTACAACCGAT TACTTTATCATGGAGAAACTGGATGTGATCATATCCCGAGCTTGGAGCTCATTGCTCAGA GTTACAAGGATTGATAGATTGTTCTCAAAAAAACCACAGGTGAAGTCCAAGAAAGACACA AAGAAGACCGATGAAATTAATGAAGACTTAGAAGAACCAGAACTATTTGTCGAGCGTATT AGGCTAGAAAAAATCGAGCTAAGCGTGAGAAATCTGATGAGCAAGATGACAATTCAAGAA CCCACATTTGATAGGATGATTGTGGTGTACAGGAGGGCAGGTACTAAGACTAAGCCTGAT CGAGGAATATTTGTAAAGCATTTCAAGAATATCCCAATGGCTGACATGGAAATTGTTCTT CCAGAGAAGAAGAACCCTACTTTAACACCAATGGATTGGGTCAAGTTTCTTATTTCTGCT GTTATTGGTCTGGTCACTTTATTTGGTTCCCTTGAAATGCCAAAGGCTGATATATGGGTT GTCATAGCAATCTTGTCGGGTGTGATTGGATATTGTGCTAAGATCTACTTCACGTTTCAG CAAAATATGACAATATATCAAAATTTGATCACAAAATCAATGTATGACAAACAGCTTGAT AGTGGGAAAGGAACACTGCTTCACCTGTGTGATGATGTGATACAGCAAGAAGTTAAAGAA GTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCAACTGAACAAGATCTGGAT TTGCGCTGTGAAGAGCTAATTAAGGAAGAGTTTGGTGCAGAGTGCAATTTTGATGTTCGT GATGCTGTAAAGAAATTGGAGAGGCTTGGTATCGTTCATCGGGACTCGATTGGAAGGATT GTCTGTGTCTCATTGAAGCGTGCAAATGAGATATTAGGCAACACTACTGAAGAATTGGTG ATGCGAGCGCAACAGAGCCCAACTGCTTCTTAA

Peptide Sequence

PEP ID	Os12t0479900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:17612395:17618588:1 gene:Os12g0479900 transcript:Os12t0479900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to aminopeptidase. (Os12t0479900-01)
Sequence	MAEEEEEKRRLGEGEGGGVMRDARKDGVVREVIRMEREAVIPVLKPKLVMKLAYLIEHDL DRSEFLKLCKKIEYTIRAWYLLQFEDLMQLYSLFDPVSGEKRLEQQNLTPEEIETLEFNF MTYLFQVMEKSNFKLLSDEEYDVAQSGKYLLNLPIKVDEPKLDSKLLSTYFKEHPHDNLP SFANKYIIFRRGIGIDRTTDYFIMEKLDVIISRAWSSLLRVTRIDRLFSKKPQVKSKKDT KKTDEINEDLEEPELFVERIRLEKIELSVRNLMSKMTIQEPTFDRMIVVYRRAGTKTKPD RGIFVKHFKNIPMADMEIVLPEKKNPTLTPMDWVKFLISAVIGLVTLFGSLEMPKADIWV VIAILSGVIGYCAKIYFTFQQNMTIYQNLITKSMYDKQLDSGKGTLLHLCDDVIQQEVKE VIISYYILMEQGKATEQDLDLRCEELIKEEFGAECNFDVRDAVKKLERLGIVHRDSIGRI VCVSLKRANEILGNTTEELVMRAQQSPTAS

Transcript Sequence

Transcript ID	Os12t0479900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:17612395:17618588:1 gene:Os12g0479900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to aminopeptidase. (Os12t0479900-01)
Sequence	GTTTTTTCCTTTTTTTTTCTTTTCTTTTTCTCTCTTCCCCATTCGCCTTCCTCCAAAACC CCATTCGCTTCGCTCCTCCTCGTCGTCGTCGCCGCCGCCGCTGCCGCTCGCCGTAGTTAG TATCCGCGCGGTGAGGATGGCGGAGGAGGAGGAGGAGAAGAGGAGGTTGGGGGAGGGGGA GGGGGGTGGGGTGATGAGGGACGCGAGGAAGGACGGGGTGGTGAGGGAGGTGATACGGAT GGAGAGGGAGGCGGTCATCCCCGTGCTCAAGCCCAAGCTCGTCATGAAGCTCGCCTACCT CATCGAGCATGATTTGGACCGTTCTGAGTTCTTGAAGCTATGTAAGAAGATCGAGTACAC CATCCGAGCTTGGTATCTTCTCCAATTCGAGGATTTAATGCAATTGTATTCTCTGTTTGA TCCTGTTTCTGGCGAGAAGAGGCTGGAGCAGCAGAACCTGACACCTGAAGAGATTGAAAC TCTGGAGTTCAATTTCATGACATATCTTTTCCAGGTTATGGAAAAGAGCAACTTCAAGTT GTTATCTGATGAAGAGTATGATGTTGCACAATCTGGAAAATATCTTCTAAACCTTCCCAT AAAAGTTGATGAGCCTAAGCTAGACAGTAAGCTGTTGTCAACATACTTTAAAGAGCATCC ACATGATAATCTGCCTTCATTTGCTAATAAGTATATTATCTTTCGTCGGGGCATTGGAAT TGACCGTACAACCGATTACTTTATCATGGAGAAACTGGATGTGATCATATCCCGAGCTTG GAGCTCATTGCTCAGAGTTACAAGGATTGATAGATTGTTCTCAAAAAAACCACAGGTGAA GTCCAAGAAAGACACAAAGAAGACCGATGAAATTAATGAAGACTTAGAAGAACCAGAACT ATTTGTCGAGCGTATTAGGCTAGAAAAAATCGAGCTAAGCGTGAGAAATCTGATGAGCAA GATGACAATTCAAGAACCCACATTTGATAGGATGATTGTGGTGTACAGGAGGGCAGGTAC TAAGACTAAGCCTGATCGAGGAATATTTGTAAAGCATTTCAAGAATATCCCAATGGCTGA CATGGAAATTGTTCTTCCAGAGAAGAAGAACCCTACTTTAACACCAATGGATTGGGTCAA GTTTCTTATTTCTGCTGTTATTGGTCTGGTCACTTTATTTGGTTCCCTTGAAATGCCAAA GGCTGATATATGGGTTGTCATAGCAATCTTGTCGGGTGTGATTGGATATTGTGCTAAGAT CTACTTCACGTTTCAGCAAAATATGACAATATATCAAAATTTGATCACAAAATCAATGTA TGACAAACAGCTTGATAGTGGGAAAGGAACACTGCTTCACCTGTGTGATGATGTGATACA GCAAGAAGTTAAAGAAGTCATAATTTCTTACTATATCTTAATGGAACAGGGGAAGGCAAC TGAACAAGATCTGGATTTGCGCTGTGAAGAGCTAATTAAGGAAGAGTTTGGTGCAGAGTG CAATTTTGATGTTCGTGATGCTGTAAAGAAATTGGAGAGGCTTGGTATCGTTCATCGGGA CTCGATTGGAAGGATTGTCTGTGTCTCATTGAAGCGTGCAAATGAGATATTAGGCAACAC TACTGAAGAATTGGTGATGCGAGCGCAACAGAGCCCAACTGCTTCTTAAGTTTCACGATG GACAGCTGGACTGGAATGCACTCCTCATCTTTCTGTAAATTACGCTGCCATGACGGACTT GTTCATCCTGAAAACAGTCCTTCATGTTTTGTTGGCAAATGTGCCATACGTGCTCTGCAC TATAGTTAGGCTTCCTTTTATTTTCGGCGAGTTTTAATGTGTAACTATGTTATGCTTCAG TTTAAAATGGGTACGGGTGATTTGTACATAACACGTGTAATAAAAACAACTGTACAAAAA CCCTCATACCTGCCTTGGTTCTTTTTACTGGCAGGTTTACGAGTCCACTGTTGCTTGCTT CCTTT