Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0479400-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:17571864:17577699:-1 gene:Os12g0479400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 24 description:Similar to Auxin response factor 1. (Os12t0479400-01);Similar to Auxin response factor 24. (Os12t0479400-02);Similar to Isoform 2 of Auxin response factor 24. (Os12t0479400-03)
Sequence	ATGGCTGCTGCAGCGACGGCGGCGGCCTCGCCGGTTGAGGGGCTCACCGGCGGCGGCGGC GGTGGTGGTGGAGGAGTGGACGGGCTGTTCGTGGAGCTGTGGCGCGCGTGCGCGGGGCCG CTGGTGACGGTGCCCGCCGTCGGGGAGAGGGTCTTCTACCTCCCGCAGGGCCACATCGAG CAGGTGGAGGCATCGACGAACCAGGTCGCCGAGCAGCAGGGGGCTCCGCTCTACAATCTG CCATGGAAGATCCCGTGCAAGGTCATGAACGTCGAGCTCAAGGCTGAGCCTGATACGGAT GAGGTGTATGCGCAGCTCACCCTGCTTCCGGAGAAGCAGCAGGATGGGAATGGGAGTGGT AACGGGAATGTGTCCAAAGACAAGGTGGAGGAGGAAGAGGTGGTGCCACCAGCTGCAACT GAGCGGCCCCGGGTGCACTCCTTCTGCAAGACGCTCACTGCGTCGGACACGAGCACGCAT GGTGGCTTCTCGGTGCTGCGCCGGCACGCGGATGAGTGCCTCCCACCACTGGATATGAGT CAGCATCCCCCAACACAAGAGCTGGTGGCCAAGGATCTTCATGGGGTTGAGTGGCGCTTC CGTCACATCTTCCGAGGTCAGCCACGAAGACACCTTCTCCAGAGTGGTTGGAGTGTTTTT GTGAGTGCCAAACGCCTTGTTGCTGGAGATGCCTTCATATTTCTCAGAGGTGAGAATGGG GAACTACGAGTTGGAGTTCGGCGTGCAATGAGACAACAAGCTAATATTCCATCTTCGGTC ATATCAAGCCACAGTATGCATCTTGGTGTTCTTGCAACTGCATGGCATGCAGTGAACACT GGAACCATGTTCACTGTGTACTACAAGCCAAGGACTAGTCCATCTGAATTTGTGGTACCA CGTGATCTGTACAAGGAATCTCTGAAACGAAATCATTCAATAGGGATGAGATTCAAGATG ACATTTGAAGGCGAAGAGGCTGCAGAGCAAAGATTCACTGGCACAATTGTTGGAGTAGGT GATTCTGACCCATCTGGTTGGGCTGACTCAAAATGGCGTTCCCTTAAGGTGCGATGGGAT GAAGCTGCTTCTGTTCCTCGTCCTGATAGGGTTTCTCCTTGGCAAATAGAACCTGCTAAC AGCCCTTCCCCTGTCAACCCTCTTCCAGCACCCCGAACCAAGCGGGCTCGTCCAAATGTT TTAGCTTCCTCACCTGACTTGTCTGCTGTAAACAAAGAAGTTGCTTCAAAAGTCATGGCA AACTCGCAGCAAAATGGTCTTCCAAGGGCCTTCCACAGTCAAGAAAACATGAATTTGAGA AGTCGTTTTGGTGATAGCAATGAGCTAAATACTTCCCAAAAGCTTACCATGTGGTCTTCA GGAAGCAATCAAGAGAAAAATAATGTTTCTGTCCAGAGGGAGCTAGGTTCACAGAGTTGG ATGCAGATGAGAAGGCCTGATGGTTCCTCTGAGATATTATCTGGATTTCAACCACTGAAA GATACGCGGAACCCTCTGAGTTCATTTCCTAGTCAGATATCTGGAAACCGTTCAAATACG TGGAACACAATCAATGTTCATTATCCCGACCAAAATGCCAATCATAATATGTACCCTGGC ACATGGTCTCTTATGCCTCCAAACACTGGTTTTGGTGTGAATCAGCAGAACTACCTAATG ACGCCTGACATCACACTCCCTCAAAGGTCTCTTAATGCCAAGTTTGGTGGGAATGGAGCA TTCACTTCGCTTCGGGCCCATGGCATAGATCAGCGCTCCTCTGGTTGGCTTGGGCATATT GAGCCAAGTTCTCACATTGATGATGCCTCATCGAGTCTTATCAAGCCACAGCCTTTGGTT ATTGATCACAATGTTCAGAAAGCTAAAGGCTCTTCATGCATGCTATTTGGGATTTCTCTT GACAGCCCTGCAAAACCTGAACTATTGATATCCCCACCAAGTGTTGCATTTGATGGGAAG CTCCAACAGGATGCACTTGAAGAGGATGAATGCTCTGATCCTTCCAAGACTGTGAAGCCA CTTGATGGAGCTCAGCACGATTCTGCTAGAGAGAAACATCAGTCATGTCCAGATGGTACC AAAAACATTCAGAGTAAACAGCAAAATGGTTCCTCCCGAAGTTGCAAGAAGGTCCACAAG CAAGGAATCGCACTCGGGAGGTCAATAGATCTTACAAAGTTCACTTGCTATGATGAGTTG ATTGCTGAACTGGACCAGATGTTTGACTTCAATGGTGAGCTGAACAGTTCAAGCAAGAAC TGGATGGTCGTTTACACTGATAATGAGGGTGACATGATGTTGGTTGGTGATGATCCTTGG AATGAATTCTGCAACATGGTTCATAAAATCTTCATCTACACGAGGGAGGAGGTCCAGAAG ATGAATCCGGGTGCCCTAAACTCAAGGTCAGAGGATAGCCGGTCTACTTCCGTGGAACGA GGGCTAGTTGGCGAAGGGCTCCAAGGTGGTCTATCCACCCCATCACTGAATTCTGAGAAC TGCTAA

Peptide Sequence

PEP ID	Os12t0479400-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:17571864:17577699:-1 gene:Os12g0479400 transcript:Os12t0479400-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 24 description:Similar to Auxin response factor 1. (Os12t0479400-01);Similar to Auxin response factor 24. (Os12t0479400-02);Similar to Isoform 2 of Auxin response factor 24. (Os12t0479400-03)
Sequence	MAAAATAAASPVEGLTGGGGGGGGGVDGLFVELWRACAGPLVTVPAVGERVFYLPQGHIE QVEASTNQVAEQQGAPLYNLPWKIPCKVMNVELKAEPDTDEVYAQLTLLPEKQQDGNGSG NGNVSKDKVEEEEVVPPAATERPRVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMS QHPPTQELVAKDLHGVEWRFRHIFRGQPRRHLLQSGWSVFVSAKRLVAGDAFIFLRGENG ELRVGVRRAMRQQANIPSSVISSHSMHLGVLATAWHAVNTGTMFTVYYKPRTSPSEFVVP RDLYKESLKRNHSIGMRFKMTFEGEEAAEQRFTGTIVGVGDSDPSGWADSKWRSLKVRWD EAASVPRPDRVSPWQIEPANSPSPVNPLPAPRTKRARPNVLASSPDLSAVNKEVASKVMA NSQQNGLPRAFHSQENMNLRSRFGDSNELNTSQKLTMWSSGSNQEKNNVSVQRELGSQSW MQMRRPDGSSEILSGFQPLKDTRNPLSSFPSQISGNRSNTWNTINVHYPDQNANHNMYPG TWSLMPPNTGFGVNQQNYLMTPDITLPQRSLNAKFGGNGAFTSLRAHGIDQRSSGWLGHI EPSSHIDDASSSLIKPQPLVIDHNVQKAKGSSCMLFGISLDSPAKPELLISPPSVAFDGK LQQDALEEDECSDPSKTVKPLDGAQHDSAREKHQSCPDGTKNIQSKQQNGSSRSCKKVHK QGIALGRSIDLTKFTCYDELIAELDQMFDFNGELNSSSKNWMVVYTDNEGDMMLVGDDPW NEFCNMVHKIFIYTREEVQKMNPGALNSRSEDSRSTSVERGLVGEGLQGGLSTPSLNSEN C

Transcript Sequence

Transcript ID	Os12t0479400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:17571864:17577699:-1 gene:Os12g0479400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AUXIN RESPONSE FACTOR 24 description:Similar to Auxin response factor 1. (Os12t0479400-01);Similar to Auxin response factor 24. (Os12t0479400-02);Similar to Isoform 2 of Auxin response factor 24. (Os12t0479400-03)
Sequence	CTTCTCCCCTCCGCCGCAGGTGTGGGGGTTCACCGGTGAGCGAGCTTGGACGTGGCGGAG GGCGGAATTGTGGGGGTTCTTTCAGTTCTCCGAGCGATTCGGGGAAGGGGGAGAGGAGAG GTGGTGGATGTGAGATCCGATGGCTGCTGCAGCGACGGCGGCGGCCTCGCCGGTTGAGGG GCTCACCGGCGGCGGCGGCGGTGGTGGTGGAGGAGTGGACGGGCTGTTCGTGGAGCTGTG GCGCGCGTGCGCGGGGCCGCTGGTGACGGTGCCCGCCGTCGGGGAGAGGGTCTTCTACCT CCCGCAGGGCCACATCGAGCAGGTGGAGGCATCGACGAACCAGGTCGCCGAGCAGCAGGG GGCTCCGCTCTACAATCTGCCATGGAAGATCCCGTGCAAGGTCATGAACGTCGAGCTCAA GGCTGAGCCTGATACGGATGAGGTGTATGCGCAGCTCACCCTGCTTCCGGAGAAGCAGCA GGATGGGAATGGGAGTGGTAACGGGAATGTGTCCAAAGACAAGGTGGAGGAGGAAGAGGT GGTGCCACCAGCTGCAACTGAGCGGCCCCGGGTGCACTCCTTCTGCAAGACGCTCACTGC GTCGGACACGAGCACGCATGGTGGCTTCTCGGTGCTGCGCCGGCACGCGGATGAGTGCCT CCCACCACTGGATATGAGTCAGCATCCCCCAACACAAGAGCTGGTGGCCAAGGATCTTCA TGGGGTTGAGTGGCGCTTCCGTCACATCTTCCGAGGTCAGCCACGAAGACACCTTCTCCA GAGTGGTTGGAGTGTTTTTGTGAGTGCCAAACGCCTTGTTGCTGGAGATGCCTTCATATT TCTCAGAGGTGAGAATGGGGAACTACGAGTTGGAGTTCGGCGTGCAATGAGACAACAAGC TAATATTCCATCTTCGGTCATATCAAGCCACAGTATGCATCTTGGTGTTCTTGCAACTGC ATGGCATGCAGTGAACACTGGAACCATGTTCACTGTGTACTACAAGCCAAGGACTAGTCC ATCTGAATTTGTGGTACCACGTGATCTGTACAAGGAATCTCTGAAACGAAATCATTCAAT AGGGATGAGATTCAAGATGACATTTGAAGGCGAAGAGGCTGCAGAGCAAAGATTCACTGG CACAATTGTTGGAGTAGGTGATTCTGACCCATCTGGTTGGGCTGACTCAAAATGGCGTTC CCTTAAGGTGCGATGGGATGAAGCTGCTTCTGTTCCTCGTCCTGATAGGGTTTCTCCTTG GCAAATAGAACCTGCTAACAGCCCTTCCCCTGTCAACCCTCTTCCAGCACCCCGAACCAA GCGGGCTCGTCCAAATGTTTTAGCTTCCTCACCTGACTTGTCTGCTGTAAACAAAGAAGT TGCTTCAAAAGTCATGGCAAACTCGCAGCAAAATGGTCTTCCAAGGGCCTTCCACAGTCA AGAAAACATGAATTTGAGAAGTCGTTTTGGTGATAGCAATGAGCTAAATACTTCCCAAAA GCTTACCATGTGGTCTTCAGGAAGCAATCAAGAGAAAAATAATGTTTCTGTCCAGAGGGA GCTAGGTTCACAGAGTTGGATGCAGATGAGAAGGCCTGATGGTTCCTCTGAGATATTATC TGGATTTCAACCACTGAAAGATACGCGGAACCCTCTGAGTTCATTTCCTAGTCAGATATC TGGAAACCGTTCAAATACGTGGAACACAATCAATGTTCATTATCCCGACCAAAATGCCAA TCATAATATGTACCCTGGCACATGGTCTCTTATGCCTCCAAACACTGGTTTTGGTGTGAA TCAGCAGAACTACCTAATGACGCCTGACATCACACTCCCTCAAAGGTCTCTTAATGCCAA GTTTGGTGGGAATGGAGCATTCACTTCGCTTCGGGCCCATGGCATAGATCAGCGCTCCTC TGGTTGGCTTGGGCATATTGAGCCAAGTTCTCACATTGATGATGCCTCATCGAGTCTTAT CAAGCCACAGCCTTTGGTTATTGATCACAATGTTCAGAAAGCTAAAGGCTCTTCATGCAT GCTATTTGGGATTTCTCTTGACAGCCCTGCAAAACCTGAACTATTGATATCCCCACCAAG TGTTGCATTTGATGGGAAGCTCCAACAGGATGCACTTGAAGAGGATGAATGCTCTGATCC TTCCAAGACTGTGAAGCCACTTGATGGAGCTCAGCACGATTCTGCTAGAGAGAAACATCA GTCATGTCCAGATGGTACCAAAAACATTCAGAGTAAACAGCAAAATGGTTCCTCCCGAAG TTGCAAGAAGGTCCACAAGCAAGGAATCGCACTCGGGAGGTCAATAGATCTTACAAAGTT CACTTGCTATGATGAGTTGATTGCTGAACTGGACCAGATGTTTGACTTCAATGGTGAGCT GAACAGTTCAAGCAAGAACTGGATGGTCGTTTACACTGATAATGAGGGTGACATGATGTT GGTTGGTGATGATCCTTGGAATGAATTCTGCAACATGGTTCATAAAATCTTCATCTACAC GAGGGAGGAGGTCCAGAAGATGAATCCGGGTGCCCTAAACTCAAGGTCAGAGGATAGCCG GTCTACTTCCGTGGAACGAGGGCTAGTTGGCGAAGGGCTCCAAGGTGGTCTATCCACCCC ATCACTGAATTCTGAGAACTGCTAATTCGTTCGGTCACTGAGGTCTTTTGTGGTTTGCAA GAACAGAAGACGACATATCCATGGTAGGAAGGAATCTTTTCGTGGTGTAGTAGTAGTAGC TGGTGCTTTATATGTATCGGGTAAGCCCCGCAGTACCCCATTTGTAGATGGTGCTTGTCC TGGTATCAGTTGCCCGCTCTTCGTTTTCGACAAGTTTTGGGTGTGCTTTGTTGAGGTTTT AAGTTATTGTATGATATGCCCCGTAGTAGTGAAAGGTGCTGAGGCCAAGCTGCCGCGCCC GGTGCGCTTGCTTGCTTGCGCTCTTCCTCCCTCCTAAGCCTTGTAAATAGCTTTGCTTCC CCCCCTTTCTTCAGTCAGTTCTAATATGTTGCGAACTGCGGTAATCGGTGTACCCCTCAA GAAGGCAAGGCAATTTGACCCTAAAATGTTGCCATTTT