Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0478400-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:17478005:17486364:1 gene:Os12g0478400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 368 description:EGF-type aspartate/asparagine hydroxylation site domain containing protein. (Os12t0478400-00)
Sequence	ATGAGAGGATTGCAGGCCGCCGTGCTGTTCACGGCGGTGGCGGCGGCGGCGGCGCCGACG AACTGCACCACCCGCTGCGGCGACATCAGCTTCGAGTACCCGTTCGGCGTGGAGCCCGGC TGCTACCACCCAGGCTTCAACCTCACCTGCAGCAGCAACGACACCAGGCTGTTCATGGGC GACGGCACCGTGCAGGTGCTCGACATCTCCATCCCCAACTCCACCTTGCGCGTCAACGCC ACCGCCATGGCGTTCGACCCCGCCGACGACGTGCAGCGCGGCGTCATCAACGCGACGACG ACATGGCGCGCCGCCGCCGCCGCCGACGACGACGGGGGCCCGTTCGTCGTGTCGAGGCGC AACACGATCGCGCTGATGGGATGCAACGCCCGCGTCGACCTCCGCGGCGGAGACCGCCGC CACAGCGACAACCTGGTCAGCTCCTGCACCGCCGTCTGCCCACCGGTCGGCGGCGGCGAC GACGCCGCGGCTCACGACGACGGCGACGGCGGCGACGGCCACACCATCGCGATCATCGAC GCCTGGAACGGCAAGTGCTCCGGCGTCGGCTGCTGCCAGGCAAACATCATGCTGGGCTAC CCTTCCTACACCATCCAGATCAAGCAGCTGCAGGAGAAGAACCTCCATAGCTTCGACTTC CAGTACATCGCCTACATCACGGACGAGACGCTGAATTTCACGGAAGAGATCGCCGGCCGC ATCGCCACTCCGGCGGCGCTCCCGGCCACGCTAGACTTTGTGATCAGAAGCAACTCGTCG TGTTCGACGCCGGCGAACTCGACGGCCGGCGGCGAGTGCCGCAGCGAACACAGCTTTTGT GAGGATTACAAGGGTGGTGGTAATACCCTCCTTGGGTATAGCTGCGTCTGCTCGGAGGGT TACCGAGGAAATCCCTACGTTGCTGGTGGATGCCATGATATCGATGAATGTCATTCCCCT GGCTACTGTTATGGAGATTGCAAGAACACAGAAGGAGGGTATCTTTGCCAGTGTCCTCTC GGCTTAACGGGCAATGCTTCAATTCCAAATGGATGCTATACGTACTAA

Peptide Sequence

PEP ID	Os12t0478400-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:17478005:17486364:1 gene:Os12g0478400 transcript:Os12t0478400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 368 description:EGF-type aspartate/asparagine hydroxylation site domain containing protein. (Os12t0478400-00)
Sequence	MRGLQAAVLFTAVAAAAAPTNCTTRCGDISFEYPFGVEPGCYHPGFNLTCSSNDTRLFMG DGTVQVLDISIPNSTLRVNATAMAFDPADDVQRGVINATTTWRAAAAADDDGGPFVVSRR NTIALMGCNARVDLRGGDRRHSDNLVSSCTAVCPPVGGGDDAAAHDDGDGGDGHTIAIID AWNGKCSGVGCCQANIMLGYPSYTIQIKQLQEKNLHSFDFQYIAYITDETLNFTEEIAGR IATPAALPATLDFVIRSNSSCSTPANSTAGGECRSEHSFCEDYKGGGNTLLGYSCVCSEG YRGNPYVAGGCHDIDECHSPGYCYGDCKNTEGGYLCQCPLGLTGNASIPNGCYTY

Transcript Sequence

Transcript ID	Os12t0478400-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:17478005:17486364:1 gene:Os12g0478400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RECEPTOR-LIKE CYTOPLASMIC KINASE 368 description:EGF-type aspartate/asparagine hydroxylation site domain containing protein. (Os12t0478400-00)
Sequence	ATGAGAGGATTGCAGGCCGCCGTGCTGTTCACGGCGGTGGCGGCGGCGGCGGCGCCGACG AACTGCACCACCCGCTGCGGCGACATCAGCTTCGAGTACCCGTTCGGCGTGGAGCCCGGC TGCTACCACCCAGGCTTCAACCTCACCTGCAGCAGCAACGACACCAGGCTGTTCATGGGC GACGGCACCGTGCAGGTGCTCGACATCTCCATCCCCAACTCCACCTTGCGCGTCAACGCC ACCGCCATGGCGTTCGACCCCGCCGACGACGTGCAGCGCGGCGTCATCAACGCGACGACG ACATGGCGCGCCGCCGCCGCCGCCGACGACGACGGGGGCCCGTTCGTCGTGTCGAGGCGC AACACGATCGCGCTGATGGGATGCAACGCCCGCGTCGACCTCCGCGGCGGAGACCGCCGC CACAGCGACAACCTGGTCAGCTCCTGCACCGCCGTCTGCCCACCGGTCGGCGGCGGCGAC GACGCCGCGGCTCACGACGACGGCGACGGCGGCGACGGCCACACCATCGCGATCATCGAC GCCTGGAACGGCAAGTGCTCCGGCGTCGGCTGCTGCCAGGCAAACATCATGCTGGGCTAC CCTTCCTACACCATCCAGATCAAGCAGCTGCAGGAGAAGAACCTCCATAGCTTCGACTTC CAGTACATCGCCTACATCACGGACGAGACGCTGAATTTCACGGAAGAGATCGCCGGCCGC ATCGCCACTCCGGCGGCGCTCCCGGCCACGCTAGACTTTGTGATCAGAAGCAACTCGTCG TGTTCGACGCCGGCGAACTCGACGGCCGGCGGCGAGTGCCGCAGCGAACACAGCTTTTGT GAGGATTACAAGGGTGGTGGTAATACCCTCCTTGGGTATAGCTGCGTCTGCTCGGAGGGT TACCGAGGAAATCCCTACGTTGCTGGTGGATGCCATGATATCGATGAATGTCATTCCCCT GGCTACTGTTATGGAGATTGCAAGAACACAGAAGGAGGGTATCTTTGCCAGTGTCCTCTC GGCTTAACGGGCAATGCTTCAATTCCAAATGGATGCTATACGTACTAACTTTTTTTTACT AAATTCTTACTAACACTGATGTGTCATGCTATGAGTCCATCTAGATTTTTTTATAACTTC CATCTACTTAAATCAAACGGTTGAGATGATTGTTAGTAAAAGTTTAGTAAGAAAAATTTA GTATGTGTAGCATTGCTCGTATTTTAATTATGGCACTTTCTGCACCTTTCATAGTACAGA AAATAAAGCTACATAAGGTGAAAAGGATGAAAGAGATATTTTTCAAGCAAAATCATGGGC TACTCCTGCAACAATTGATGTCACAAAATGCAAATATTGGTGAAAGAATGATATTGACCT TACGGGAGCTAGAAAAAGCAACGGACAATTTTGATAAAACTCGTGAAGTTGGTGGTGGAG GACATGGCATTGTATACAAAGGAATTTTAGACTTGCATTTTGTTGCCATTAAAAAATCAA GGATTGTAGTGCAAAGAGAAATAGATGATTTTATAAATTAAGTTGCAATCCTTTCCCAAG TGAATCATAGAAATGTGGTGAAGCTTCTAGGATGTTGCCTTGAGACAGAAGTTCCATTGT TGGTTTATGAATTCATTTCAAATGGATCTCTTGATGATCATCTTCACGTCGATGGACCTA TATCTCTATCATGGGTGGACCGAATAAGGATTGCACTTGAAGTTAGTAGAGCCTTGGTCT ATCTACACTCAGCCGCAACAACACCAATATTCCATAGAGATATCAAGGCATCTAACGTAC TTCTTGATGATAATTTAACAGCAAAGATATCAGACTTTGGAGCTTCAAGGTACATTCTAA TTGATCAGACTGGAGTGACTACGGTTGTTCAAGGAACAATTGGTTACCTAGATCCCATGT ACTACTATACCGGTCGTCTAACCAACAAAAGTGATGTTTTTAGTTTTGGTGTTCTTCTTA TAGAACTACTTACCCGAAAAAAGCCTATCTATAGGACTGATAGAGGTGATAGTCTTGTTC CACATTTTGCCTCACTACTGGAAGAAGGCAAATTGGTTGAAATAATAGATCCCCAAGTCA AGGAAGAGGAGAATGGGGAGGTTGAAGAAGTAGCAACACTAGCGGCAATGTGTACTAAGT TGAATGGACAAGACCGACCAACAATGAGAGAAGTGGAAATAAGGCTTGAAAACTTGCGAG CT