Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0472500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:16988415:16990867:1 gene:Os12g0472500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TPD1-like 1A, MICROSPORELESS2 description:Homolog of the Arabidopsis TAPETUM DETERMINANT1 (TPD1) protein, Regulation of early anther cell differentiation (Os12t0472500-01)
Sequence	ATGAGGGTCTCCTCGGCGTCCAGTACGCCGCCGCCGCCGGCGTTCGCGGCCGCGGCGTGG GCGGTGGTGCTGCTCGCCATGCTCCGCTCCGACGTCGCCCTCGCCGCCGCCGCATCCTCC AACGACGACACAGGTCTCTCGCCGTTGATGCCGCCGCCGCCGCTCGCCGCCCCGGTTCCC GCGGCGGTTTCTCCGGCCCCGGCGACGCCTCCCGCCGTCCTCTCCCCCCGCAAGCTCCTC CGCCCGCAAGGCGCGGACGTCGTCGGCGTCGGTTTCGTCTCCGGCAGCGGCGGCGGAGGA GGAGGAGACGGAGTACGGACGCGCCGGGTGGACGACGGGTGCGCGGGGGCGGACGACATC GCGATCTACCAGGGGAGGGCGACGCCGCTGCCGAGCGGGGTGCCGGCGTACACGGTGGAC GTGATGAACCGGTGCGCCGGCGGCGGCGGCGGCGACGAGGAGTGCGCCATCGCGGGGATC CACGTGCGGTGCGGGTGGTTCAGCTCGGTGAGCCTGGTGGACCCGCGCGTGTTCCGCCGG CTCGGCCACGACGACTGCCTCCTCAACGACGGCCGCCCGCTCCTCGCCGGCGAGACCGTC TCCTTCGAGTACACCAACTCCTTCCCCTACAAGCTCTCCGTCTCCGTCGCAACCTGCGTC GTCGACCCCGCCGCCCCATAG

Peptide Sequence

PEP ID	Os12t0472500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:16988415:16990867:1 gene:Os12g0472500 transcript:Os12t0472500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TPD1-like 1A, MICROSPORELESS2 description:Homolog of the Arabidopsis TAPETUM DETERMINANT1 (TPD1) protein, Regulation of early anther cell differentiation (Os12t0472500-01)
Sequence	MRVSSASSTPPPPAFAAAAWAVVLLAMLRSDVALAAAASSNDDTGLSPLMPPPPLAAPVP AAVSPAPATPPAVLSPRKLLRPQGADVVGVGFVSGSGGGGGGDGVRTRRVDDGCAGADDI AIYQGRATPLPSGVPAYTVDVMNRCAGGGGGDEECAIAGIHVRCGWFSSVSLVDPRVFRR LGHDDCLLNDGRPLLAGETVSFEYTNSFPYKLSVSVATCVVDPAAP

Transcript Sequence

Transcript ID	Os12t0472500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:16988415:16990867:1 gene:Os12g0472500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TPD1-like 1A, MICROSPORELESS2 description:Homolog of the Arabidopsis TAPETUM DETERMINANT1 (TPD1) protein, Regulation of early anther cell differentiation (Os12t0472500-01)
Sequence	CTTTTCGTTTCGTTTCGCCGCCCGCTTCCGCCGCGCGCGCGCACGTGCGAGAGGGGAGAG GGGGATAGCGACGCCGCGCCCAAACCCTACTACTACTCCTCCTCCTCCTCCGCGTCCTCG CCGGCCACTCGTCGCCGGCCTCCGTCGCCGCCTCCGCCTCGTCATCCACCAGAAGGCGTT CGTGCGCACGGGTTTCCGCGCGATGAGGGTCTCCTCGGCGTCCAGTACGCCGCCGCCGCC GGCGTTCGCGGCCGCGGCGTGGGCGGTGGTGCTGCTCGCCATGCTCCGCTCCGACGTCGC CCTCGCCGCCGCCGCATCCTCCAACGACGACACAGGTCTCTCGCCGTTGATGCCGCCGCC GCCGCTCGCCGCCCCGGTTCCCGCGGCGGTTTCTCCGGCCCCGGCGACGCCTCCCGCCGT CCTCTCCCCCCGCAAGCTCCTCCGCCCGCAAGGCGCGGACGTCGTCGGCGTCGGTTTCGT CTCCGGCAGCGGCGGCGGAGGAGGAGGAGACGGAGTACGGACGCGCCGGGTGGACGACGG GTGCGCGGGGGCGGACGACATCGCGATCTACCAGGGGAGGGCGACGCCGCTGCCGAGCGG GGTGCCGGCGTACACGGTGGACGTGATGAACCGGTGCGCCGGCGGCGGCGGCGGCGACGA GGAGTGCGCCATCGCGGGGATCCACGTGCGGTGCGGGTGGTTCAGCTCGGTGAGCCTGGT GGACCCGCGCGTGTTCCGCCGGCTCGGCCACGACGACTGCCTCCTCAACGACGGCCGCCC GCTCCTCGCCGGCGAGACCGTCTCCTTCGAGTACACCAACTCCTTCCCCTACAAGCTCTC CGTCTCCGTCGCAACCTGCGTCGTCGACCCCGCCGCCCCATAGCCGCCGTCAATCGCCGC AAGGAAAAAGTAGACAAAACAAAAGAAACGAAAGAGAAACAGTAGTACTAGTGACATCTC TTGCCTTACTAGTTTTTTTGTTCTTTTCTTTTTTTTTGACCCCATGTCAGTATCACTCAC AGAACAACAGCTCACCATTTGCTACGCCTC