Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0468500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:16702529:16707209:1 gene:Os12g0468500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 17 description:Similar to predicted protein. (Os12t0468500-01)
Sequence	ATGTTTGGCAGCTGCGGCGGCGGGTACAGGACGCAGACGATCAACGGGAGGAAGGGGACG TTCGTGCGGCTCGAGCAGCAGGAGGATCAGGAGCGGCAGCCGGCGGCGACGTACACCATG GACGGCAGCGGCGGCGGCGGCAGGGTGCAGCACGTGATGGACAGCTACTTCTCGAGCGCG CCCAAGATCCGGACGCGGTCGGTGCGCATGGCGGCGGCGGGCGTGATGAGCATCGGCGGC TACCGGGCGGAGCGGCTCAAGAGCATCGGCCGCGTGTTCCAGGAGGACCTCACCAACATG TCCCAGAAGATCTTCGACCCGCAGGACGCGTTCCTGGTGCGGATGAACCGCCTCTTCGTC ATGGCCTGCATCGTCTCCGTCGCCGTCGACCCACTCTTCTTCTACCTCCCCGCCGTCACC GCCACCGACAGCAACACCTGCATCGGCTTCGACCGCGGCCTCGCCACGGGCGCCACCGCG GTGCGCTCGGCCATCGACCTCTTCTACCTCGCCCGCATCGCGCTCCAGTTCCGGACGGCG TACATCGCGCCGTCGTCGCGGGTGTTCGGCCGCGGCGAGCTGGTGATCGACCCGGCCGCC ATCGCGCGGCGCTACGTCCGCCGCTTCTTCGTCGTCGACCTCCTCTCCGTGCTCCCGCTG CCGCAGATCCCCATCTGGAACTTCCTCCACCGCCCCAAGGGCGCCGACCTCCTGCCCACC AAGAACGCCCTCCTCTTCATCGTCCTCGTCCAGTACATCCCCCGCCTCGTCCGCTTCTAC CCCATCACCTCCGAGCTCAAGCGCACCACCGGCGTCTTCGCCGAGACCGCCTTCGCCGGC GCCGCCTACTACCTCCTCCTCTACATGCTCGCCAGCCACATGGTGGGGGCGTTCTGGTAC CTGCTATCGATCGAGAGGCTGGACGACTGCTGGAGGGAGAACTGCAGGGTGCTCAAGTTC CATCAGTGCAAGAAGTACATGTACTGCGGAGGAGGGAACCTGGGGCAGTCGGGTTTCCTG GAGTGGAGGACGATGATCCGGCAGGTGCTGGTGATGGAGTGCGCGCCGGCGGACGAGGCC GGGACCGGGTTCCAGTACGGGATCTTCACGACGGCGATCCAGTCGGGCGTGGTGTCGACG ACGAACCTGGTCGCCAAGGTGCTCTTCTGCCTCTGGTGGGGGCTCCAGAACCTGAGCACC GTGGGGCAGGGGCTGAAGACGACGCACTACAAGGGGGAGGCCCTGTTCGCCATCTTCCTC GCCGTGTTCGGCCTCATCCTCATGGCGCTCCTCATCGGCAACATGCAGACGTACCTGCAG TCGATGACGCTGCGGCTTGAGGAGATGCGGCTGCGGCGCCGCGACTCGGAGCAGTGGATG CGCCACCGCGTGCTCCCCGTCGACCTCCAGGAGCGCGTGTGGCGGCACGACCAGTACCGG TGGCTGGAGACGCGGGGCGTGGACGAGGACAGCCTCGTGCGCAGCCTCCCCAAGGACCTG CGGCGGGACGTGAAGCGGCACCTCTGCCTCCGCCTCGTCCGCCGCGTGCCGCTGTTCGCC AACATGGACGAGCGCCTCCTCGACGCCATCTGCGAGCGCCTCAAGCCCAGCCTGTGCACG GAGGCCACCTACATCCTCCGGGAAGGGGACCCCGTGGACGAGATGCTGTTCATCATCCGC GGGAGGCTGGAGAGCTCCACCACGGACGGCGGGAGGATGGGGTTCTTCAACCGGGGCCTC CTCAAGGAAGGGGACTTCTGCGGGGAGGAGCTCCTGACGTGGGCGCTCGACCCCAAGGCC GCCGCCAACCTGCCGCTGTCGACGCGCACCGTCAAGGCCATCTCCGAGGTGGAGGCGTTC GCGCTCCACGCCGACGAGCTCAAGTTCGTCGCCGGGCAGTTCAGGCGGCTGCACAGCAAG CAGCTGCAGCAGACGTTCCGGTTCTACTCGCAGCAGTGGCGCACCTGGGCGTCCTGCTTC ATCCAGGCCGCCTGGAGGAGGCACCTCAAGCGCAGGGCCGCCGAGCAGCGCCGCCGCGAG GAGGAGGAGGAGGAGGAGGCCGCGTCGGCGTCGTCGTCCTGCCAGATCACCACCACCGTC CTCGTATCGCGCTTCGCCAAGAACGCCATGCGCGGCGCGCAGCGGCAACGGTCGCGCCGG GACGCCAACCTCATCGTCCTGCCCAAACCGCCGGAGCCTGACTTCCAGACCATGGAGTAC TGA

Peptide Sequence

PEP ID	Os12t0468500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:16702529:16707209:1 gene:Os12g0468500 transcript:Os12t0468500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 17 description:Similar to predicted protein. (Os12t0468500-01)
Sequence	MFGSCGGGYRTQTINGRKGTFVRLEQQEDQERQPAATYTMDGSGGGGRVQHVMDSYFSSA PKIRTRSVRMAAAGVMSIGGYRAERLKSIGRVFQEDLTNMSQKIFDPQDAFLVRMNRLFV MACIVSVAVDPLFFYLPAVTATDSNTCIGFDRGLATGATAVRSAIDLFYLARIALQFRTA YIAPSSRVFGRGELVIDPAAIARRYVRRFFVVDLLSVLPLPQIPIWNFLHRPKGADLLPT KNALLFIVLVQYIPRLVRFYPITSELKRTTGVFAETAFAGAAYYLLLYMLASHMVGAFWY LLSIERLDDCWRENCRVLKFHQCKKYMYCGGGNLGQSGFLEWRTMIRQVLVMECAPADEA GTGFQYGIFTTAIQSGVVSTTNLVAKVLFCLWWGLQNLSTVGQGLKTTHYKGEALFAIFL AVFGLILMALLIGNMQTYLQSMTLRLEEMRLRRRDSEQWMRHRVLPVDLQERVWRHDQYR WLETRGVDEDSLVRSLPKDLRRDVKRHLCLRLVRRVPLFANMDERLLDAICERLKPSLCT EATYILREGDPVDEMLFIIRGRLESSTTDGGRMGFFNRGLLKEGDFCGEELLTWALDPKA AANLPLSTRTVKAISEVEAFALHADELKFVAGQFRRLHSKQLQQTFRFYSQQWRTWASCF IQAAWRRHLKRRAAEQRRREEEEEEEAASASSSCQITTTVLVSRFAKNAMRGAQRQRSRR DANLIVLPKPPEPDFQTMEY

Transcript Sequence

Transcript ID	Os12t0468500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:16702529:16707209:1 gene:Os12g0468500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CYCLIC NUCLEOTIDE GATED CHANNEL 17 description:Similar to predicted protein. (Os12t0468500-01)
Sequence	GTGTTTCTGATCGAGAAGAATGCTTCTGACAAATCGATCCCTCTGAAATTTCGTTGGTCA GAGATCAATCGATTCTTCAAGAAGGAATCGCAAATCGCAATGCATGCATGAGGAAGCAAT TGCATCGATCGATGTCATCAGCAATGGCGGCGGCAAAGGAGGCAGCAGGTGAGGAGGCGT CGTAAGATGTTTGGCAGCTGCGGCGGCGGGTACAGGACGCAGACGATCAACGGGAGGAAG GGGACGTTCGTGCGGCTCGAGCAGCAGGAGGATCAGGAGCGGCAGCCGGCGGCGACGTAC ACCATGGACGGCAGCGGCGGCGGCGGCAGGGTGCAGCACGTGATGGACAGCTACTTCTCG AGCGCGCCCAAGATCCGGACGCGGTCGGTGCGCATGGCGGCGGCGGGCGTGATGAGCATC GGCGGCTACCGGGCGGAGCGGCTCAAGAGCATCGGCCGCGTGTTCCAGGAGGACCTCACC AACATGTCCCAGAAGATCTTCGACCCGCAGGACGCGTTCCTGGTGCGGATGAACCGCCTC TTCGTCATGGCCTGCATCGTCTCCGTCGCCGTCGACCCACTCTTCTTCTACCTCCCCGCC GTCACCGCCACCGACAGCAACACCTGCATCGGCTTCGACCGCGGCCTCGCCACGGGCGCC ACCGCGGTGCGCTCGGCCATCGACCTCTTCTACCTCGCCCGCATCGCGCTCCAGTTCCGG ACGGCGTACATCGCGCCGTCGTCGCGGGTGTTCGGCCGCGGCGAGCTGGTGATCGACCCG GCCGCCATCGCGCGGCGCTACGTCCGCCGCTTCTTCGTCGTCGACCTCCTCTCCGTGCTC CCGCTGCCGCAGATCCCCATCTGGAACTTCCTCCACCGCCCCAAGGGCGCCGACCTCCTG CCCACCAAGAACGCCCTCCTCTTCATCGTCCTCGTCCAGTACATCCCCCGCCTCGTCCGC TTCTACCCCATCACCTCCGAGCTCAAGCGCACCACCGGCGTCTTCGCCGAGACCGCCTTC GCCGGCGCCGCCTACTACCTCCTCCTCTACATGCTCGCCAGCCACATGGTGGGGGCGTTC TGGTACCTGCTATCGATCGAGAGGCTGGACGACTGCTGGAGGGAGAACTGCAGGGTGCTC AAGTTCCATCAGTGCAAGAAGTACATGTACTGCGGAGGAGGGAACCTGGGGCAGTCGGGT TTCCTGGAGTGGAGGACGATGATCCGGCAGGTGCTGGTGATGGAGTGCGCGCCGGCGGAC GAGGCCGGGACCGGGTTCCAGTACGGGATCTTCACGACGGCGATCCAGTCGGGCGTGGTG TCGACGACGAACCTGGTCGCCAAGGTGCTCTTCTGCCTCTGGTGGGGGCTCCAGAACCTG AGCACCGTGGGGCAGGGGCTGAAGACGACGCACTACAAGGGGGAGGCCCTGTTCGCCATC TTCCTCGCCGTGTTCGGCCTCATCCTCATGGCGCTCCTCATCGGCAACATGCAGACGTAC CTGCAGTCGATGACGCTGCGGCTTGAGGAGATGCGGCTGCGGCGCCGCGACTCGGAGCAG TGGATGCGCCACCGCGTGCTCCCCGTCGACCTCCAGGAGCGCGTGTGGCGGCACGACCAG TACCGGTGGCTGGAGACGCGGGGCGTGGACGAGGACAGCCTCGTGCGCAGCCTCCCCAAG GACCTGCGGCGGGACGTGAAGCGGCACCTCTGCCTCCGCCTCGTCCGCCGCGTGCCGCTG TTCGCCAACATGGACGAGCGCCTCCTCGACGCCATCTGCGAGCGCCTCAAGCCCAGCCTG TGCACGGAGGCCACCTACATCCTCCGGGAAGGGGACCCCGTGGACGAGATGCTGTTCATC ATCCGCGGGAGGCTGGAGAGCTCCACCACGGACGGCGGGAGGATGGGGTTCTTCAACCGG GGCCTCCTCAAGGAAGGGGACTTCTGCGGGGAGGAGCTCCTGACGTGGGCGCTCGACCCC AAGGCCGCCGCCAACCTGCCGCTGTCGACGCGCACCGTCAAGGCCATCTCCGAGGTGGAG GCGTTCGCGCTCCACGCCGACGAGCTCAAGTTCGTCGCCGGGCAGTTCAGGCGGCTGCAC AGCAAGCAGCTGCAGCAGACGTTCCGGTTCTACTCGCAGCAGTGGCGCACCTGGGCGTCC TGCTTCATCCAGGCCGCCTGGAGGAGGCACCTCAAGCGCAGGGCCGCCGAGCAGCGCCGC CGCGAGGAGGAGGAGGAGGAGGAGGCCGCGTCGGCGTCGTCGTCCTGCCAGATCACCACC ACCGTCCTCGTATCGCGCTTCGCCAAGAACGCCATGCGCGGCGCGCAGCGGCAACGGTCG CGCCGGGACGCCAACCTCATCGTCCTGCCCAAACCGCCGGAGCCTGACTTCCAGACCATG GAGTACTGATTGGTAGTGTCGAATTATACACAACATGCAAATCTTGATGGAGAGGAAACC AATTATACTTTTGTCAGTCTGGCTGTACCGCTGGGGGGATTTGCAATTATAACACTGCTG CAGCAAATTTCTTATTTACTTTACATGTTGAGGTACCACCACCCCTGGCCAGGAGATTAT CATACAATCCGTGCAGAATACTGGACAGATTCAAGCAGTGGCACATGAACAAAATGCAAG ACGATCATCACAAATTCACAAGTAGTTCATCCGATTGGGTAGGTTGATGCCAGCTCGCGC TAGAAGGTCCCTTGCTATTTTTTCAGCTGAAGCAATTACCTCCTCCTGGAATAGACCACA GGAAAAGTAAAAAACAGAGCCACAGAGGCCAGAGTGTGAGAGACACAATCAGTTTTCAGT GCATTATAGGTACTTAAGCAGGGTGTAAAATTATTGGTTGGTGAACCAGACAATTATATA CCAAAGCCTATTTTTAGCATATGGTCAGCTAGGGGTAGGACTGTTGGAGTACCGTTTCTA CTTTCTAACCATTAGAAATCTGAACTTCAGAAGTGTTTATTCCTCATGAATGTTTTGACA TTACCTGTTCTAGTTTAACCAGTTCGTGAATTGTTGGCATGCAATTATGTTCATCGTGTT TACTGTTTAATCTAGCATATTTGGCTC