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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0465100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:16469122:16469853:1 gene:Os12g0465100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os12t0465100-01)
Sequence

ATGCACACACAGACGAATCTAATGTTTCTCATTGCAGTCATTGTGTCCCTCATGCTTTCT
CAAGGGGAGTCGCAACCATGCGGGCCATCAAGCATCGACGTCCAGCAGATGAACACCGGG
AAGAAGGTCGGCACGCTCGACACGGTGTTCCGGGTGACGGTGGAGAACAGGTGCGTTTGC
ACGGTGAAGGCCGTCGTCGTCCAAGCCAATGGCTTCACGAGCTCCATCCCCGTTGACCCC
AGGCTATTCCGAAAGGCTGGGGACACAAGCTATGTCGTCGGTGATGGACAGCAGATTGCG
AGCACCAATTCTGTCATGTTTGAATATGCCTGGAGCCACTACTTCCAGATCACTCCGGCT
AGCGTGCAGGTTGAATGCTAA

Peptide Sequence

PEP ID

Os12t0465100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:16469122:16469853:1 gene:Os12g0465100 transcript:Os12t0465100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os12t0465100-01)
Sequence

MHTQTNLMFLIAVIVSLMLSQGESQPCGPSSIDVQQMNTGKKVGTLDTVFRVTVENRCVC
TVKAVVVQANGFTSSIPVDPRLFRKAGDTSYVVGDGQQIASTNSVMFEYAWSHYFQITPA
SVQVEC

Transcript Sequence

Transcript ID

Os12t0465100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:16469122:16469853:1 gene:Os12g0465100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Glycosyl transferase, family 31 protein. (Os12t0465100-01)
Sequence

AACACATCCCATGCATACAACATTTTGACCTTTTTATTTAAGAATTAGAGTAGAGTTAAA
GATAGGAGAAGTGATCAGAAGTCACCATGCACACACAGACGAATCTAATGTTTCTCATTG
CAGTCATTGTGTCCCTCATGCTTTCTCAAGGGGAGTCGCAACCATGCGGGCCATCAAGCA
TCGACGTCCAGCAGATGAACACCGGGAAGAAGGTCGGCACGCTCGACACGGTGTTCCGGG
TGACGGTGGAGAACAGGTGCGTTTGCACGGTGAAGGCCGTCGTCGTCCAAGCCAATGGCT
TCACGAGCTCCATCCCCGTTGACCCCAGGCTATTCCGAAAGGCTGGGGACACAAGCTATG
TCGTCGGTGATGGACAGCAGATTGCGAGCACCAATTCTGTCATGTTTGAATATGCCTGGA
GCCACTACTTCCAGATCACTCCGGCTAGCGTGCAGGTTGAATGCTAAGCTGATTTAAGAC
ATGTACTTCCTTTGTCGCAAAAATATTGTAGGAAAAATAAAATTGTTATTGTTATCGCCG
GTGAAGTTGCATAATGATTGGATTAAT