Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0464400-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:16398248:16400772:1 gene:Os12g0464400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 150, Dehydrogenase/reductase description:Similar to Oxidoreductase, short chain dehydrogenase/reductase family protein, expressed. (Os12t0464400-01)
Sequence	ATGGTGGATTTGGTGAACGGCGTGCTCAACTGGGTGGCGACGCCGGCCATGGTGGCCAGC CTGCTGCTCTTCTACCCGCCCTACTACCTCTTCAAGACCGTCCACTCCTTCCTCTCCTAC CTCTTCCCCGACGACCTCGCCCGCAAGGTCGTCCTCATCACCGGCGCCTCCTCCGGCATC GGCGAGCAATTAGCATACAACTATGCTCTGAACCGGGCATCATTGGTCCTTGTTGCAAGA AGAGAATGGAGCCTGCGTAAAGTTGCCGATCAAGCGTTCGAGCTTGGAGCACCTGATGTG ATCATTCTTCCGGGCGACGTTGCGAATCCTGAAGACTGCAAAAGATTTGTTCAGACCGCA ATCGATCACTACGGGCGATTGGACCATCTTGTGTGCAACGCTGGCATCGCAAGTGTTGGC GCGTTTCAGGAGATTCCAGATGTTACTAACTACAGCTCTCAATTTGATGTGAACTTCTGG GGTTCAGTTCAGTCAACTTTTGAAGCTCTCCCTCATCTGAAAAGGAGCCGAGGAAGAATC GTTGTTACTGCGTCGGCAACCGGATGGAATCCTGTTCCAAGAATGACCTTCTACAATGCT GCCAATGCTGCACTGATAAACTTCTACGAGACGCTGCGGACAGAGCTTGGTAGCCAAGTT GGAATCACAATTGTAACACCTGGGTGGATCGAGTCTGAGATGTCAAAAGGGAAATTTCTC AAGGATCATGGTGAAATGGAGGTCGATCAAGAAATGCGAGATGCTCAAATTGGTTTATTT CCCGTGGAGTACGCGAAGAATTGCGCAAAAGCCATGGTACAAGCGGTTCGGCAAGGGAAG CGTTGTCTCACCGTGCCACCATGGTTCAGCACAATGTACCTGTGGAGGGTATTCGCACCG GAGGTCGTCGAGTTCTGCTACCGCCTCCTGTACATGCACCGCCATGGTGGTAGCCAAGCT GATGCGCCGAGCAAGAAGATGGCTGAGGCTGGTGGAAAGAAGCTCTTGTATCCAACGTCG CTGCGCTCTGATGACATCAAGGATGAGTGA

Peptide Sequence

PEP ID	Os12t0464400-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:16398248:16400772:1 gene:Os12g0464400 transcript:Os12t0464400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 150, Dehydrogenase/reductase description:Similar to Oxidoreductase, short chain dehydrogenase/reductase family protein, expressed. (Os12t0464400-01)
Sequence	MVDLVNGVLNWVATPAMVASLLLFYPPYYLFKTVHSFLSYLFPDDLARKVVLITGASSGI GEQLAYNYALNRASLVLVARREWSLRKVADQAFELGAPDVIILPGDVANPEDCKRFVQTA IDHYGRLDHLVCNAGIASVGAFQEIPDVTNYSSQFDVNFWGSVQSTFEALPHLKRSRGRI VVTASATGWNPVPRMTFYNAANAALINFYETLRTELGSQVGITIVTPGWIESEMSKGKFL KDHGEMEVDQEMRDAQIGLFPVEYAKNCAKAMVQAVRQGKRCLTVPPWFSTMYLWRVFAP EVVEFCYRLLYMHRHGGSQADAPSKKMAEAGGKKLLYPTSLRSDDIKDE

Transcript Sequence

Transcript ID	Os12t0464400-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:16398248:16400772:1 gene:Os12g0464400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:endosperm-specific gene 150, Dehydrogenase/reductase description:Similar to Oxidoreductase, short chain dehydrogenase/reductase family protein, expressed. (Os12t0464400-01)
Sequence	GCTCTCTCTCTGCCAAACTTGTGTTCTTGCGACCCTGCTCTGCTCTGATACGTGTCTGAA GCTGAAAACGATCGAAGAGAAGATCGGTCGAGGTTGCCGAGGAGGAAGGAAGGAAGGAAG GAAGAAGGCGACGATGGTGGATTTGGTGAACGGCGTGCTCAACTGGGTGGCGACGCCGGC CATGGTGGCCAGCCTGCTGCTCTTCTACCCGCCCTACTACCTCTTCAAGACCGTCCACTC CTTCCTCTCCTACCTCTTCCCCGACGACCTCGCCCGCAAGGTCGTCCTCATCACCGGCGC CTCCTCCGGCATCGGCGAGCAATTAGCATACAACTATGCTCTGAACCGGGCATCATTGGT CCTTGTTGCAAGAAGAGAATGGAGCCTGCGTAAAGTTGCCGATCAAGCGTTCGAGCTTGG AGCACCTGATGTGATCATTCTTCCGGGCGACGTTGCGAATCCTGAAGACTGCAAAAGATT TGTTCAGACCGCAATCGATCACTACGGGCGATTGGACCATCTTGTGTGCAACGCTGGCAT CGCAAGTGTTGGCGCGTTTCAGGAGATTCCAGATGTTACTAACTACAGCTCTCAATTTGA TGTGAACTTCTGGGGTTCAGTTCAGTCAACTTTTGAAGCTCTCCCTCATCTGAAAAGGAG CCGAGGAAGAATCGTTGTTACTGCGTCGGCAACCGGATGGAATCCTGTTCCAAGAATGAC CTTCTACAATGCTGCCAATGCTGCACTGATAAACTTCTACGAGACGCTGCGGACAGAGCT TGGTAGCCAAGTTGGAATCACAATTGTAACACCTGGGTGGATCGAGTCTGAGATGTCAAA AGGGAAATTTCTCAAGGATCATGGTGAAATGGAGGTCGATCAAGAAATGCGAGATGCTCA AATTGGTTTATTTCCCGTGGAGTACGCGAAGAATTGCGCAAAAGCCATGGTACAAGCGGT TCGGCAAGGGAAGCGTTGTCTCACCGTGCCACCATGGTTCAGCACAATGTACCTGTGGAG GGTATTCGCACCGGAGGTCGTCGAGTTCTGCTACCGCCTCCTGTACATGCACCGCCATGG TGGTAGCCAAGCTGATGCGCCGAGCAAGAAGATGGCTGAGGCTGGTGGAAAGAAGCTCTT GTATCCAACGTCGCTGCGCTCTGATGACATCAAGGATGAGTGAATGCCCAGTTCTTCTGA GCATGAACTTCAGTATATTCCTCTGAAGAACTCTGCAGGTCTGAACCTTCCATGAAATGG GCCAAATAGATAAAATCTTAGTATGAACTGTGGCTATGATCATGGAAAAATATGTATGTG CTACTATTCTGTGTATGAATAAGTTGTGTTCTAATAGTGCTGTGTTCTTAACTGGTATGA ATTATGCATCCTATTTACCACT