Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0458100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:15998272:16005479:-1 gene:Os12g0458100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypersensitive-related protein 201, spermidine hydroxycinnamoyl transferase description:Transferase family protein. (Os12t0458100-01)
Sequence	ATGAAGCTTGATTCGTTCACGGCACGCCGGGGAAACCCCGAGCTGGTTGCGCCGGCGAGG GCGACGCCTCGCGAAACCAAGCCGCTCTCCGACCTCGACGACCACTGGGACCTGCGCTAC CTGCAGCCAAGCCTCGAGTTCTTCCGCGTGGTCGACGGCGATCGTCGGCCGGCGAGGCCA GGGGACGGCATCAAGGCGGCCCTAGCGGAGGCCCTCGTGTACTACTACCCGATCGCCGGC CGCCTGCGGGAGCTGCCCACGGGCCACATGCTCGCCGTGGAGTGCACCGCCGAAGGGGTG GTCTTTGTGGAGGCAGAGGCAGACGTGGCGTTGGAGGACTTCGGCGAGCCGCTGATGCCG ACGTTCCATGGCGCCGAGGGGTTCCTGTGCGATGTTGGAGACACCAGAGTCATCGTTGGG AGACCACTGTTTTACCTGCAGATCACTTATCTCAAATGTGGAGGATTTGTCCTTGGAACT TACATGTGTCATTGCATAGCTGATGCCTTCGGCACAATTCAATTCTTGAAAGCTATAGTT GATATAGCACGTGGTGAGGCAAAACCAACCACGTTGCCAGTTTGGGAAAGGGAGCTCTTT CTCGCAACAAGTCTACAACCCCACATCAAAGAAGACCAAAAGAAATTATTTGATGAACTG GAGAGCACCACATGTGATGATATTATGGTGACAATGCCTACTGAAAACATGGTTTCTGAA TACTTTATTCTCTCTCAAATAGATATGGCTGCACTAAGGCGTCATGTTCCATTAAATCTC AATAAAACAGTCACGAGCTTTGAGCTACTAACTGCAGTTACATGGCGTTCCCGTACTATA GCACTTGGCTACAGACCTTGCCATATTGTACGCTTGATGATTGTTGTGAATGCACGTGGG AGATGGAAGAAGCTTCCTTTGGGATACTATGGCAATGGGCTTTTGTGCTCTGTCATTGAG ACAACAGTCAATGACTTGTGCACAAACCCGTTAGGACACACAATTGAACTCGTCCGGAAG GCTAAAGACGAGATGAAGACAGAAGAAAATATGCAATTGAGAGTAGATTTATTGCCATTG TGGCGTGAAAAACCGTACATAAAAGTACAGAGAATATTTGAAGCATGTGACATAAAATGG ATTGGGCAGGATACTTTGGATATTGGATGGGCTAAGAGGATAGGAGGTGGCATACCGACT GTTAGTCCGCCAAATTTGACAAGCTACCAATTCTTGTGCAAGAATGAAAAAGGTGAAAAG TCAACCGTCATCTCCATGTTGTTGCCACAACCTGCAATGGATAGATTCAAAAAGGAGATG GCTGCTTGGTTAATTGAATAA

Peptide Sequence

PEP ID	Os12t0458100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:15998272:16005479:-1 gene:Os12g0458100 transcript:Os12t0458100-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypersensitive-related protein 201, spermidine hydroxycinnamoyl transferase description:Transferase family protein. (Os12t0458100-01)
Sequence	MKLDSFTARRGNPELVAPARATPRETKPLSDLDDHWDLRYLQPSLEFFRVVDGDRRPARP GDGIKAALAEALVYYYPIAGRLRELPTGHMLAVECTAEGVVFVEAEADVALEDFGEPLMP TFHGAEGFLCDVGDTRVIVGRPLFYLQITYLKCGGFVLGTYMCHCIADAFGTIQFLKAIV DIARGEAKPTTLPVWERELFLATSLQPHIKEDQKKLFDELESTTCDDIMVTMPTENMVSE YFILSQIDMAALRRHVPLNLNKTVTSFELLTAVTWRSRTIALGYRPCHIVRLMIVVNARG RWKKLPLGYYGNGLLCSVIETTVNDLCTNPLGHTIELVRKAKDEMKTEENMQLRVDLLPL WREKPYIKVQRIFEACDIKWIGQDTLDIGWAKRIGGGIPTVSPPNLTSYQFLCKNEKGEK STVISMLLPQPAMDRFKKEMAAWLIE

Transcript Sequence

Transcript ID	Os12t0458100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:15998272:16005479:-1 gene:Os12g0458100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypersensitive-related protein 201, spermidine hydroxycinnamoyl transferase description:Transferase family protein. (Os12t0458100-01)
Sequence	AAGAACGGAGAGACAAAACCAGCTGCATTATAGCACACACCAGTCGTGTCTACGTACACA AATTGTTGTCGCACACATAATTATCATCCATCGATCCATCCATACAAACGTACGTAGAAT CATGAAGCTTGATTCGTTCACGGCACGCCGGGGAAACCCCGAGCTGGTTGCGCCGGCGAG GGCGACGCCTCGCGAAACCAAGCCGCTCTCCGACCTCGACGACCACTGGGACCTGCGCTA CCTGCAGCCAAGCCTCGAGTTCTTCCGCGTGGTCGACGGCGATCGTCGGCCGGCGAGGCC AGGGGACGGCATCAAGGCGGCCCTAGCGGAGGCCCTCGTGTACTACTACCCGATCGCCGG CCGCCTGCGGGAGCTGCCCACGGGCCACATGCTCGCCGTGGAGTGCACCGCCGAAGGGGT GGTCTTTGTGGAGGCAGAGGCAGACGTGGCGTTGGAGGACTTCGGCGAGCCGCTGATGCC GACGTTCCATGGCGCCGAGGGGTTCCTGTGCGATGTTGGAGACACCAGAGTCATCGTTGG GAGACCACTGTTTTACCTGCAGATCACTTATCTCAAATGTGGAGGATTTGTCCTTGGAAC TTACATGTGTCATTGCATAGCTGATGCCTTCGGCACAATTCAATTCTTGAAAGCTATAGT TGATATAGCACGTGGTGAGGCAAAACCAACCACGTTGCCAGTTTGGGAAAGGGAGCTCTT TCTCGCAACAAGTCTACAACCCCACATCAAAGAAGACCAAAAGAAATTATTTGATGAACT GGAGAGCACCACATGTGATGATATTATGGTGACAATGCCTACTGAAAACATGGTTTCTGA ATACTTTATTCTCTCTCAAATAGATATGGCTGCACTAAGGCGTCATGTTCCATTAAATCT CAATAAAACAGTCACGAGCTTTGAGCTACTAACTGCAGTTACATGGCGTTCCCGTACTAT AGCACTTGGCTACAGACCTTGCCATATTGTACGCTTGATGATTGTTGTGAATGCACGTGG GAGATGGAAGAAGCTTCCTTTGGGATACTATGGCAATGGGCTTTTGTGCTCTGTCATTGA GACAACAGTCAATGACTTGTGCACAAACCCGTTAGGACACACAATTGAACTCGTCCGGAA GGCTAAAGACGAGATGAAGACAGAAGAAAATATGCAATTGAGAGTAGATTTATTGCCATT GTGGCGTGAAAAACCGTACATAAAAGTACAGAGAATATTTGAAGCATGTGACATAAAATG GATTGGGCAGGATACTTTGGATATTGGATGGGCTAAGAGGATAGGAGGTGGCATACCGAC TGTTAGTCCGCCAAATTTGACAAGCTACCAATTCTTGTGCAAGAATGAAAAAGGTGAAAA GTCAACCGTCATCTCCATGTTGTTGCCACAACCTGCAATGGATAGATTCAAAAAGGAGAT GGCTGCTTGGTTAATTGAATAACTAAGAGGATAAATAAGTATATCTGCTTCACGTAGAGT AAAACCACATCATCTTTTATTTGGTCGGTTGCTGAATAAGACATAGTTTCATCGGTGTTG GTTTTGTTATTCAGATGGGCTTGGGCGCGGATGGCATTTAATTAGTTAGGTCTTTTCCAT TTGGTGACCAGTGTGTTATATTTATGATTATGTACTTTATTTTGTGGAGGATCGATTATC GTATAGCTCGGTCATAAGTCAGTGTACCATTACAAAACTACATCAAGTTGTGCATTATTG TGACCTTGTAAAATGGTGTTTTATGAGATAATCAAATTGTTGTTCGATCTGGCACACCCT TTAATAATATACCTATATATGGTTC