Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0454800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:15776462:15779912:1 gene:Os12g0454800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CROWN ROOTLESS 4 description:Receptor-like serine/threonine kinase, Cytokinin signaling (Os12t0454800-01)
Sequence	ATGGCGCTACTGCTCTGGGTGTTCAGCTGCTCGCTCTTCTCCTTGTGGATCCTCTCGTTC ATGAGGTCCCAGGCCACCGAGGCGCGCCACGGGACGCTCGCCGTCATGTGCGACGAGCGC GCCCGGATCCTCCAGGACCAGGTGAAGGTGAGCATGAACCACCTCCAGGCGCTCGCCATC CTTGTCTCCACCTTCCACCACTCCAAGAGCCCGTCCGCCATCGACCAGACCACATTCGCG CGGTACGTGGAGCGCACCGCGTTCGAGCGTCCGCTGACGAGCGGGCTGGCGTACGCCGCT CGGGTGACGCACTCGGAGCGGGAGCTGTTCGAGCGGCAGCAAGCGTGGAGCATCAGAGCG ATGAACTTCTCCTCCAAACGGCCGCGGGCGGAGGAGTACGCCCCGGTCATCTTCGCGCAG GACGCCTACAAGCACGTCGTCTCCATCGACATGCTCTCGGGGGCAGAAGACCGTGGAAAT CTACTGCGAGCGAGAGAATCAGGCAAGGTTGTTCTAACTGCTCCTTTCCAGCTGCTCAAT AAACGCATCGGAGTGGTCCTGACGTACGCAGTGTACAAGTCTGAGCTTCCCCTGAATGCG ACGGTGCATGATCGTATACAGTCTTCTATAGGATACTTGGGTGGTGTCTTTGACATAGAA GGACATGTTGATAAGTTGCTTGAAAAGCTTGCAGGCAAAGAGCCCATGACGGTGAACATA TACGACACTACCGGTGAGAGCATGATTCGTATGTATGGTTCTTCGAATGAATCAGCCAGT GGCATGTGTCATGTCAGCACGCTCGACTTCGGTGATCCATTAAGGAAGCACGAGATGCAT TGCAGGTTCACGCAAGGGCCACCTTGGCCATGGCTGGCAGTAGCATCATCGTACGGAACC CTCGTGATTTCTTTACTTGTTGGATACATCTTTCATTTTACTGACAAATGGATTGCCAAA GTCGAAGATGGTTACAAGGCGACTGACATGCAGATGCCAGCAAAGGATGAATTCGCGGCC ACAGAGAGGATTTCAGATATGGAAAGAGATCTGAAGGAAGATGCTCTGTTTTTCGACACG ACCAAAAGCCCCAGTCTGTTGGAGATCTCGCGTCTGCTGAACCATCGTGATCCAGCTCAG AATGTTCACCAGGAGGAGCAAGAGCTCAACCTTCCATTGGAGGCGCAAGACAAACTGAAA GAGACTGAGAGGAAGCTGGGGAGGATGTCCAAGTTCATTACAAAGGTTATGAAATTAACT AGCGCTAGCATTCGCTGTTTACCTTCTCGATTTCACTGCTTCAACAAGAAGGTATGGAGC ATTAGCCTTCTCGGATTTTTACTCTTCATTCTTGTCATTGGAGCTTTTGATCAGCCATAC AATCAACCTTTGGGCATGGGAGGGGAGGGTGACAATAACATGATGCTGAAGAATTTTGGG TTCTCTCGTGGAAGGTTGTTAATTGATACGCTCCATGGTACATGGACTAAACGCGGTGTG CAGAGTAGTGACACGATCAGGGTTGATCTCAGAAAGATGACAAGGAATAATGACAGTTCT GGGCAGCAGCTCAAGCACTGGTCTTCACATAAGTCAAGTGAGATCCCGGCTGTCCTGTAT GTTCCGATGAATGGAAAGCAAGTTATAGTCCACTGCAATCTAATTGTAGATGAGAAAGCA TTGGTAAATTGGATATCAAATGGTGATACTGATCAGTCAAGCAAGTATCAGAAAGAAACT GCAGGGATACAAAACAGAACAGACAAGCCTCACCTGCCAGCAAACAAGTCACACAAAACA ACAGTAAGCCCGTGGATTGTCTTACTTCCAGTTATCATGCTTGTACTCCTTGGCAGTATT ATATGGCGCCGGTGCAACGACCATAGGAGGAGAGTTCAACAAAAAGAGCTGGAACTTTTG GGAATAATGGGGCCTAGTCGATTCCAACTACAAGATCTGGTAGCCGCAACGGGCAATTTC GCAGATGAGAACAAGCTCGGGCAAGGAGGGTTTGGCCCTGTGTACAAAGGCTACTTGAGG GACCAGGACCTTCATGTGGCCATCAAGGTGTTGTCCAGAAGGCAATCTTGTCAAGAACAA TCGGCGCAAGGGTTGAGGGAGTTCAAGGCAGAGGTGAAAGTCATGACGCAACTGAGGCAC AGAAACATTGTCAAGCTTGTGGGCTGGAGCGACAGCAAGAAACAGCTCCTTCTCGTTTAT GAACTTATGGCTCAAGGAAGCCTTGACAAGCATCTCTACGACCCTGAGAAAATTTTAACT TGGCAACAAAGGTACCAAATTAAATTTGCTAACCTGTTTAATTCAACTGACAAGATTGTA CTTGATCTGGGCTCTGCTTTGCTCTACCTCCACCATGACTGCGAGAAATGCATTGTGCAT GGAGACATCAAGCCTGCAAATGTAATGCTTGATGTGTCACACAATGCTAAGCTTGGTGAC TTCGGGTTAGCAAGGCTTGTTGAGCATGGGGGAGAGCCACAAACAACACAAGTTGTCGCA GGGACCCCTGGATACATTGACCCAGAATTCATCAACAACCGCTGGCCTCGCACCGAATTG GATGTGTACAGCTTCGGTATTGTCCTCTTAGAGATAGCTTGTGGCAAGCGGCCGGCATCG AGGCAGCTGCCAAATGGAGCTTCATCACTGCTAGCCTGGGTGCGTGATTTGTATGACCAG GGCAAGATTCTTGACGCAGCAGATCAGAGACTGAACGGCGAGTTCAATCAGCAGCAAATG GAGCGTGTGATCGTCATGGGTCTCTGCTGTTCACATCAAGACCCGATCCAGCGACCGTCT ATCGTGCAAGCTATGGATGTTCTGTGA

Peptide Sequence

PEP ID	Os12t0454800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:15776462:15779912:1 gene:Os12g0454800 transcript:Os12t0454800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CROWN ROOTLESS 4 description:Receptor-like serine/threonine kinase, Cytokinin signaling (Os12t0454800-01)
Sequence	MALLLWVFSCSLFSLWILSFMRSQATEARHGTLAVMCDERARILQDQVKVSMNHLQALAI LVSTFHHSKSPSAIDQTTFARYVERTAFERPLTSGLAYAARVTHSERELFERQQAWSIRA MNFSSKRPRAEEYAPVIFAQDAYKHVVSIDMLSGAEDRGNLLRARESGKVVLTAPFQLLN KRIGVVLTYAVYKSELPLNATVHDRIQSSIGYLGGVFDIEGHVDKLLEKLAGKEPMTVNI YDTTGESMIRMYGSSNESASGMCHVSTLDFGDPLRKHEMHCRFTQGPPWPWLAVASSYGT LVISLLVGYIFHFTDKWIAKVEDGYKATDMQMPAKDEFAATERISDMERDLKEDALFFDT TKSPSLLEISRLLNHRDPAQNVHQEEQELNLPLEAQDKLKETERKLGRMSKFITKVMKLT SASIRCLPSRFHCFNKKVWSISLLGFLLFILVIGAFDQPYNQPLGMGGEGDNNMMLKNFG FSRGRLLIDTLHGTWTKRGVQSSDTIRVDLRKMTRNNDSSGQQLKHWSSHKSSEIPAVLY VPMNGKQVIVHCNLIVDEKALVNWISNGDTDQSSKYQKETAGIQNRTDKPHLPANKSHKT TVSPWIVLLPVIMLVLLGSIIWRRCNDHRRRVQQKELELLGIMGPSRFQLQDLVAATGNF ADENKLGQGGFGPVYKGYLRDQDLHVAIKVLSRRQSCQEQSAQGLREFKAEVKVMTQLRH RNIVKLVGWSDSKKQLLLVYELMAQGSLDKHLYDPEKILTWQQRYQIKFANLFNSTDKIV LDLGSALLYLHHDCEKCIVHGDIKPANVMLDVSHNAKLGDFGLARLVEHGGEPQTTQVVA GTPGYIDPEFINNRWPRTELDVYSFGIVLLEIACGKRPASRQLPNGASSLLAWVRDLYDQ GKILDAADQRLNGEFNQQQMERVIVMGLCCSHQDPIQRPSIVQAMDVL

Transcript Sequence

Transcript ID	Os12t0454800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:15776462:15779912:1 gene:Os12g0454800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CROWN ROOTLESS 4 description:Receptor-like serine/threonine kinase, Cytokinin signaling (Os12t0454800-01)
Sequence	GTTGATCGCGCGGACGACACCCCCATGTCGTGGACGCAGAGCGCTAAGGACGGCTGCCGC AGCCGAGCCAAGGCATCAGCGGATCGAGCGCGATTCTGCTCTGCGGGGAGCCCCGACGAC TGGGGCGGGGTTGGAGGAGGAGAACAGCACGGCTGCCTGGCTTGCCTGGTTGTGGCTGCT GCTGCTACCGTTGAAGCTGTCGGTTCACCGGCAGCGCCTGCCACTGGATGGCGCTACTGC TCTGGGTGTTCAGCTGCTCGCTCTTCTCCTTGTGGATCCTCTCGTTCATGAGGTCCCAGG CCACCGAGGCGCGCCACGGGACGCTCGCCGTCATGTGCGACGAGCGCGCCCGGATCCTCC AGGACCAGGTGAAGGTGAGCATGAACCACCTCCAGGCGCTCGCCATCCTTGTCTCCACCT TCCACCACTCCAAGAGCCCGTCCGCCATCGACCAGACCACATTCGCGCGGTACGTGGAGC GCACCGCGTTCGAGCGTCCGCTGACGAGCGGGCTGGCGTACGCCGCTCGGGTGACGCACT CGGAGCGGGAGCTGTTCGAGCGGCAGCAAGCGTGGAGCATCAGAGCGATGAACTTCTCCT CCAAACGGCCGCGGGCGGAGGAGTACGCCCCGGTCATCTTCGCGCAGGACGCCTACAAGC ACGTCGTCTCCATCGACATGCTCTCGGGGGCAGAAGACCGTGGAAATCTACTGCGAGCGA GAGAATCAGGCAAGGTTGTTCTAACTGCTCCTTTCCAGCTGCTCAATAAACGCATCGGAG TGGTCCTGACGTACGCAGTGTACAAGTCTGAGCTTCCCCTGAATGCGACGGTGCATGATC GTATACAGTCTTCTATAGGATACTTGGGTGGTGTCTTTGACATAGAAGGACATGTTGATA AGTTGCTTGAAAAGCTTGCAGGCAAAGAGCCCATGACGGTGAACATATACGACACTACCG GTGAGAGCATGATTCGTATGTATGGTTCTTCGAATGAATCAGCCAGTGGCATGTGTCATG TCAGCACGCTCGACTTCGGTGATCCATTAAGGAAGCACGAGATGCATTGCAGGTTCACGC AAGGGCCACCTTGGCCATGGCTGGCAGTAGCATCATCGTACGGAACCCTCGTGATTTCTT TACTTGTTGGATACATCTTTCATTTTACTGACAAATGGATTGCCAAAGTCGAAGATGGTT ACAAGGCGACTGACATGCAGATGCCAGCAAAGGATGAATTCGCGGCCACAGAGAGGATTT CAGATATGGAAAGAGATCTGAAGGAAGATGCTCTGTTTTTCGACACGACCAAAAGCCCCA GTCTGTTGGAGATCTCGCGTCTGCTGAACCATCGTGATCCAGCTCAGAATGTTCACCAGG AGGAGCAAGAGCTCAACCTTCCATTGGAGGCGCAAGACAAACTGAAAGAGACTGAGAGGA AGCTGGGGAGGATGTCCAAGTTCATTACAAAGGTTATGAAATTAACTAGCGCTAGCATTC GCTGTTTACCTTCTCGATTTCACTGCTTCAACAAGAAGGTATGGAGCATTAGCCTTCTCG GATTTTTACTCTTCATTCTTGTCATTGGAGCTTTTGATCAGCCATACAATCAACCTTTGG GCATGGGAGGGGAGGGTGACAATAACATGATGCTGAAGAATTTTGGGTTCTCTCGTGGAA GGTTGTTAATTGATACGCTCCATGGTACATGGACTAAACGCGGTGTGCAGAGTAGTGACA CGATCAGGGTTGATCTCAGAAAGATGACAAGGAATAATGACAGTTCTGGGCAGCAGCTCA AGCACTGGTCTTCACATAAGTCAAGTGAGATCCCGGCTGTCCTGTATGTTCCGATGAATG GAAAGCAAGTTATAGTCCACTGCAATCTAATTGTAGATGAGAAAGCATTGGTAAATTGGA TATCAAATGGTGATACTGATCAGTCAAGCAAGTATCAGAAAGAAACTGCAGGGATACAAA ACAGAACAGACAAGCCTCACCTGCCAGCAAACAAGTCACACAAAACAACAGTAAGCCCGT GGATTGTCTTACTTCCAGTTATCATGCTTGTACTCCTTGGCAGTATTATATGGCGCCGGT GCAACGACCATAGGAGGAGAGTTCAACAAAAAGAGCTGGAACTTTTGGGAATAATGGGGC CTAGTCGATTCCAACTACAAGATCTGGTAGCCGCAACGGGCAATTTCGCAGATGAGAACA AGCTCGGGCAAGGAGGGTTTGGCCCTGTGTACAAAGGCTACTTGAGGGACCAGGACCTTC ATGTGGCCATCAAGGTGTTGTCCAGAAGGCAATCTTGTCAAGAACAATCGGCGCAAGGGT TGAGGGAGTTCAAGGCAGAGGTGAAAGTCATGACGCAACTGAGGCACAGAAACATTGTCA AGCTTGTGGGCTGGAGCGACAGCAAGAAACAGCTCCTTCTCGTTTATGAACTTATGGCTC AAGGAAGCCTTGACAAGCATCTCTACGACCCTGAGAAAATTTTAACTTGGCAACAAAGGT ACCAAATTAAATTTGCTAACCTGTTTAATTCAACTGACAAGATTGTACTTGATCTGGGCT CTGCTTTGCTCTACCTCCACCATGACTGCGAGAAATGCATTGTGCATGGAGACATCAAGC CTGCAAATGTAATGCTTGATGTGTCACACAATGCTAAGCTTGGTGACTTCGGGTTAGCAA GGCTTGTTGAGCATGGGGGAGAGCCACAAACAACACAAGTTGTCGCAGGGACCCCTGGAT ACATTGACCCAGAATTCATCAACAACCGCTGGCCTCGCACCGAATTGGATGTGTACAGCT TCGGTATTGTCCTCTTAGAGATAGCTTGTGGCAAGCGGCCGGCATCGAGGCAGCTGCCAA ATGGAGCTTCATCACTGCTAGCCTGGGTGCGTGATTTGTATGACCAGGGCAAGATTCTTG ACGCAGCAGATCAGAGACTGAACGGCGAGTTCAATCAGCAGCAAATGGAGCGTGTGATCG TCATGGGTCTCTGCTGTTCACATCAAGACCCGATCCAGCGACCGTCTATCGTGCAAGCTA TGGATGTTCTGTGATCTGCAGACGCAGAGTTGCCGGTACCTCCCGCAGCACATGATACAG GACACATCCGGTCCATGCAAGAACAGGCTTATGCCGACCTGCCAGTTGAGGATCATTCTG TGCATACTGTCACCCGAAGTACGTATTTTACTTCCAAGGATTCAGTTTATCTACTTGCTG AAGGATAACGAATTCTCTCTTTTGAATAGCAATATTAGTTATGTTTACATGCGCCTGTTT AGATTGTTTTGTCAACAAGATTGCTGATAGGCACACATCTATTTTGTTCATAGTTTTGTG CTATCTATCTATCTATTATCCATCTACACATGTAGTATAAATGATAGTTTCATATGAACC AGCTCTATTGTTAGCATTAATCCTGACTTAC