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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0454600-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:15758649:15760484:1 gene:Os12g0454600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY NODULIN LIKE PROTEIN 24 description:Cupredoxin domain containing protein. (Os12t0454600-00)
Sequence

ATGTCGCGATCCACGGCGGCGACCGCCGCCGTGGTGGTGGCCGTGGCCGTGGTGGCCGCG
ATGGCGATGCCGGCGGCTGGCCAGGGCGCGCCGTCGGGGTCGCCGGCGCCGCCGTACAAG
AACCACACGGTGGCCGGCGCCGACGGGTGGTTCTTCAACGCGACGAGCAACACCACCTCC
GGCAACTACTCCGACTGGGCCGCCGGCGAGACCTTCTATCTCGGCGACTACCTCATCTTC
AAGACGGACGACAGCTCGTCGGTGGTTCAGACGTCGAACGCCACCGCCTACTCGCTCTGC
GACGCCGAGGGCCCGGAGACCCTCATCTACAGCCCCGGCCACGGCGACGCGGCGTCGGCG
TCCCCGCGCGCCGCCACCATCGCCGTCCCGCTCACCGTCGAGGGCGCCAACTACTTCTTC
TCCGAAGCCGGCGACGGCGCGCAGTGCGAGGAAGGGATGCGGTTCGAGATCAAGGTCGCC
CACGGCCGCGGCCTGCCGCCGGACCTCGCGCACCCGCCGCCGCCGCCGAAGCCGCGCGTC
CTCGCGCCGCCGCCCGACGGGACGAGCATGAGCCCGGGCGTCGCCGGCGCCGGCGCCGGC
GCCGCCGGCGACTTGACGGAGGGGAAGAGCGGCGGGAGCCGAGCCGGCGTGGGGTTGTTG
GGGGTAGCTGTTGGGGTGGGGTTGGCAGTTTTGGTCGCTGCCTGA

Peptide Sequence

PEP ID

Os12t0454600-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:15758649:15760484:1 gene:Os12g0454600 transcript:Os12t0454600-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY NODULIN LIKE PROTEIN 24 description:Cupredoxin domain containing protein. (Os12t0454600-00)
Sequence

MSRSTAATAAVVVAVAVVAAMAMPAAGQGAPSGSPAPPYKNHTVAGADGWFFNATSNTTS
GNYSDWAAGETFYLGDYLIFKTDDSSSVVQTSNATAYSLCDAEGPETLIYSPGHGDAASA
SPRAATIAVPLTVEGANYFFSEAGDGAQCEEGMRFEIKVAHGRGLPPDLAHPPPPPKPRV
LAPPPDGTSMSPGVAGAGAGAAGDLTEGKSGGSRAGVGLLGVAVGVGLAVLVAA

Transcript Sequence

Transcript ID

Os12t0454600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:15758649:15760484:1 gene:Os12g0454600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:EARLY NODULIN LIKE PROTEIN 24 description:Cupredoxin domain containing protein. (Os12t0454600-00)
Sequence

CCACATTTGTCCCAACACACCACCACCACACTCAAGATCAATGTCGCGATCCACGGCGGC
GACCGCCGCCGTGGTGGTGGCCGTGGCCGTGGTGGCCGCGATGGCGATGCCGGCGGCTGG
CCAGGGCGCGCCGTCGGGGTCGCCGGCGCCGCCGTACAAGAACCACACGGTGGCCGGCGC
CGACGGGTGGTTCTTCAACGCGACGAGCAACACCACCTCCGGCAACTACTCCGACTGGGC
CGCCGGCGAGACCTTCTATCTCGGCGACTACCTCATCTTCAAGACGGACGACAGCTCGTC
GGTGGTTCAGACGTCGAACGCCACCGCCTACTCGCTCTGCGACGCCGAGGGCCCGGAGAC
CCTCATCTACAGCCCCGGCCACGGCGACGCGGCGTCGGCGTCCCCGCGCGCCGCCACCAT
CGCCGTCCCGCTCACCGTCGAGGGCGCCAACTACTTCTTCTCCGAAGCCGGCGACGGCGC
GCAGTGCGAGGAAGGGATGCGGTTCGAGATCAAGGTCGCCCACGGCCGCGGCCTGCCGCC
GGACCTCGCGCACCCGCCGCCGCCGCCGAAGCCGCGCGTCCTCGCGCCGCCGCCCGACGG
GACGAGCATGAGCCCGGGCGTCGCCGGCGCCGGCGCCGGCGCCGCCGGCGACTTGACGGA
GGGGAAGAGCGGCGGGAGCCGAGCCGGCGTGGGGTTGTTGGGGGTAGCTGTTGGGGTGGG
GTTGGCAGTTTTGGTCGCTGCCTGAGTGGGTGGGCCCACATTGTCATTGTCCCAGTTGTA
AGATTTATTTACTGTATTTTGTTGGACGAATAAGCTATTCAATTCCATTGGTTATT