Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0448900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:15330237:15340502:-1 gene:Os12g0448900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pathogen-inducible oxygenase, fatty acid alpha-oxygenase, alpha-oxygenase, Rice alpha-oxygenase, rice fatty acid alpha-(di)oxygenase description:Fatty acid alpha-dioxygenase family, Enzyme that oxygenates fatty acids into 2R-hydroperoxides (Os12t0448900-01)
Sequence	ATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGTTTTCTCTAAG ATGTCTTTCTTTGACAAGATTGGCTTTCTATTCATTCATGCATTTGACAAGAGAAACCTG TGGCACAAGGTGCCTGTTCCGATCGGTTTGCTCTACCTGAACACCCGCCGGACCCTGCTC GAAAAATACAACCTGCTAGCTGTTGGGAGGAGTTCTCACGGTGCTCTGTTTGATCCCAAG GAGTTCCTGTACCGCACCGAGGATGGCAAGTACAACGACCCCCATAATGCTGAGGCTGGT AGCCAAAACACCTTTTTTGGGAGAAACATGGAGCCGGTTGATCAACAGGATGAGTTGATG AGCCCAGATCCATTTGTTGTGGCGACAAAGCTGTTAGCCAGGAGAGAATACAAGGACACA GGGAAACAGTTCAATATACTAGCAGCTGCATGGATACAGTTCATGGTTCATGACTGGATG GATCATATGGAGGATACCGGACAGATTGGAATCACAGCTCCAAAAGAAGTGGCCAATGAG TGCCCACTCAAATCGTTCAAGTTCCACCCCACAAAAGAACTGCCTACGAATTCTGATGGA ATAAAGATTGGTCACTACAATATCCGCACAGCTTGGTGGGATGGGAGTGCAGTATATGGT AATAATGAGGAAAGGGCAGAAAAGCTCAGGACTTATGTTGATGGAAAACTAGTGATCGGA GATGACGGTCTTCTTTTGCATAAGGAGAACGGTGTGGCATTATCCGGCGACATTCGCAAC AGTTGGGCTGGTGTTTCGATCTTACAAGCTCTTTTTGTTAAGGAACACAATGCAGTTTGT GATGCAATAAAGGAAGAACATCCCAACCTATCAGACGAAGAATTATATCGGTATGCCAAA TTGGTCACTTCTGCTGTTATTGCAAAGGTTCACACTATTGATTGGACTGTCGAGCTTCTC AAGACAAAAACCATGAGAGCTGCAATGCGCGCAAATTGGTATGGATTATTGGGTAAGAAA ATAAAAGACACATTTGGTCACATAGGAGGACCGATATTAGGTGGGCTTGTGGGACTGAAG AAGCCGAACAACCATGGCGTACCTTATTCTTTGACTGAAGAGTTTACCAGTGTTTACAGA ATGCACTCCCTAATACCAAGCACTCTCAAGCTCAGGGATCCGACAGGGCAACCCGATGCA AATAATTCCCCACCATGCCTGGAAGACATCGATATTGGAGAGATGATTGGTCTCAAGGGG GAAGAACAGCTATCAAAAATAGGGTTTGAAAAACAAGCATTATCAATGGGATATCAAGCT TGTGGTGCACTTGAACTATGGAACTATCCAAGTTTCTTCAGGAACCTCATTCCACAAAAT TTGGATGGTACCAATCGATCTGACAGAATCGACCTTGCTGCCCTAGAAGTATACCGAGAC AGGGAGAGAAGTGTACCAAGGTACAATGAGTTCAGGAGGAGACTATTTCTGATTCCAATA AAAAGCTGGGAGGATCTGACAAGTGACAAGGATGCAATTGAAACCATAAGAGCAATATAC GGAGATGATGTAGAGAAATTGGATCTTCTTGTTGGTCTTATGGCAGAGAAAAAAATCAAG GGATTTGCCATAAGCGAAACAGCATTCAACATTTTCATTTTAATGGCATCAAGGAGGCTC GAAGCAGATCGATTTTTTACAAGCAATTTCAATGAGGAAACATACACCAAGAAGGGGATG CAATGGGTCAAAACAACAGAAGGCCTACGAGATGTGATCAACCGGCACTACCCTGAAATC ACTGCCAAGTGGATGAAGTCCTCTAGTGCTTTCTCTGTGTGGGATGCAGACTACTAG

Peptide Sequence

PEP ID	Os12t0448900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:15330237:15340502:-1 gene:Os12g0448900 transcript:Os12t0448900-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pathogen-inducible oxygenase, fatty acid alpha-oxygenase, alpha-oxygenase, Rice alpha-oxygenase, rice fatty acid alpha-(di)oxygenase description:Fatty acid alpha-dioxygenase family, Enzyme that oxygenates fatty acids into 2R-hydroperoxides (Os12t0448900-01)
Sequence	MGSGLFKPRVHPDLRDVFSKMSFFDKIGFLFIHAFDKRNLWHKVPVPIGLLYLNTRRTLL EKYNLLAVGRSSHGALFDPKEFLYRTEDGKYNDPHNAEAGSQNTFFGRNMEPVDQQDELM SPDPFVVATKLLARREYKDTGKQFNILAAAWIQFMVHDWMDHMEDTGQIGITAPKEVANE CPLKSFKFHPTKELPTNSDGIKIGHYNIRTAWWDGSAVYGNNEERAEKLRTYVDGKLVIG DDGLLLHKENGVALSGDIRNSWAGVSILQALFVKEHNAVCDAIKEEHPNLSDEELYRYAK LVTSAVIAKVHTIDWTVELLKTKTMRAAMRANWYGLLGKKIKDTFGHIGGPILGGLVGLK KPNNHGVPYSLTEEFTSVYRMHSLIPSTLKLRDPTGQPDANNSPPCLEDIDIGEMIGLKG EEQLSKIGFEKQALSMGYQACGALELWNYPSFFRNLIPQNLDGTNRSDRIDLAALEVYRD RERSVPRYNEFRRRLFLIPIKSWEDLTSDKDAIETIRAIYGDDVEKLDLLVGLMAEKKIK GFAISETAFNIFILMASRRLEADRFFTSNFNEETYTKKGMQWVKTTEGLRDVINRHYPEI TAKWMKSSSAFSVWDADY

Transcript Sequence

Transcript ID	Os12t0448900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:15330237:15340502:-1 gene:Os12g0448900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Pathogen-inducible oxygenase, fatty acid alpha-oxygenase, alpha-oxygenase, Rice alpha-oxygenase, rice fatty acid alpha-(di)oxygenase description:Fatty acid alpha-dioxygenase family, Enzyme that oxygenates fatty acids into 2R-hydroperoxides (Os12t0448900-01)
Sequence	AGAGCGTGCGGGCTTCTTCTCCTAGCATGAGTTGAGCCTCTTAATAATTTTCTCCGAAAA GGCGTGCTTTAATTTCCTCTGAGATTGAGCTCAGCAGTACATCTCCAGGTTTTTCTTCTG CCAGCAGCCATGGGTTCAGGACTCTTCAAGCCTCGTGTTCATCCGGACCTCCGTGATGTT TTCTCTAAGATGTCTTTCTTTGACAAGATTGGCTTTCTATTCATTCATGCATTTGACAAG AGAAACCTGTGGCACAAGGTGCCTGTTCCGATCGGTTTGCTCTACCTGAACACCCGCCGG ACCCTGCTCGAAAAATACAACCTGCTAGCTGTTGGGAGGAGTTCTCACGGTGCTCTGTTT GATCCCAAGGAGTTCCTGTACCGCACCGAGGATGGCAAGTACAACGACCCCCATAATGCT GAGGCTGGTAGCCAAAACACCTTTTTTGGGAGAAACATGGAGCCGGTTGATCAACAGGAT GAGTTGATGAGCCCAGATCCATTTGTTGTGGCGACAAAGCTGTTAGCCAGGAGAGAATAC AAGGACACAGGGAAACAGTTCAATATACTAGCAGCTGCATGGATACAGTTCATGGTTCAT GACTGGATGGATCATATGGAGGATACCGGACAGATTGGAATCACAGCTCCAAAAGAAGTG GCCAATGAGTGCCCACTCAAATCGTTCAAGTTCCACCCCACAAAAGAACTGCCTACGAAT TCTGATGGAATAAAGATTGGTCACTACAATATCCGCACAGCTTGGTGGGATGGGAGTGCA GTATATGGTAATAATGAGGAAAGGGCAGAAAAGCTCAGGACTTATGTTGATGGAAAACTA GTGATCGGAGATGACGGTCTTCTTTTGCATAAGGAGAACGGTGTGGCATTATCCGGCGAC ATTCGCAACAGTTGGGCTGGTGTTTCGATCTTACAAGCTCTTTTTGTTAAGGAACACAAT GCAGTTTGTGATGCAATAAAGGAAGAACATCCCAACCTATCAGACGAAGAATTATATCGG TATGCCAAATTGGTCACTTCTGCTGTTATTGCAAAGGTTCACACTATTGATTGGACTGTC GAGCTTCTCAAGACAAAAACCATGAGAGCTGCAATGCGCGCAAATTGGTATGGATTATTG GGTAAGAAAATAAAAGACACATTTGGTCACATAGGAGGACCGATATTAGGTGGGCTTGTG GGACTGAAGAAGCCGAACAACCATGGCGTACCTTATTCTTTGACTGAAGAGTTTACCAGT GTTTACAGAATGCACTCCCTAATACCAAGCACTCTCAAGCTCAGGGATCCGACAGGGCAA CCCGATGCAAATAATTCCCCACCATGCCTGGAAGACATCGATATTGGAGAGATGATTGGT CTCAAGGGGGAAGAACAGCTATCAAAAATAGGGTTTGAAAAACAAGCATTATCAATGGGA TATCAAGCTTGTGGTGCACTTGAACTATGGAACTATCCAAGTTTCTTCAGGAACCTCATT CCACAAAATTTGGATGGTACCAATCGATCTGACAGAATCGACCTTGCTGCCCTAGAAGTA TACCGAGACAGGGAGAGAAGTGTACCAAGGTACAATGAGTTCAGGAGGAGACTATTTCTG ATTCCAATAAAAAGCTGGGAGGATCTGACAAGTGACAAGGATGCAATTGAAACCATAAGA GCAATATACGGAGATGATGTAGAGAAATTGGATCTTCTTGTTGGTCTTATGGCAGAGAAA AAAATCAAGGGATTTGCCATAAGCGAAACAGCATTCAACATTTTCATTTTAATGGCATCA AGGAGGCTCGAAGCAGATCGATTTTTTACAAGCAATTTCAATGAGGAAACATACACCAAG AAGGGGATGCAATGGGTCAAAACAACAGAAGGCCTACGAGATGTGATCAACCGGCACTAC CCTGAAATCACTGCCAAGTGGATGAAGTCCTCTAGTGCTTTCTCTGTGTGGGATGCAGAC TACTAGTGCAAAAATTAAAGGCCCCCTGCCATATTATTTGGCAAGTTCTATGAAATATTA TTTGTTTACAGAATTATGGTGTTTGTTCAGTGTAAATATAGTTAAATATGTCAGTGTAAT ATATGTAATAGGATTCATCGCACGACACAAGTTGTATGCTCATTTGTTTACAATTTATTG CACATTATTATTTGTTCATTGTAATTAAATATGGCTGGGAAAATAAGTAGGAGGAGACCA TATAACATCTTCCTACAATCTTCTGTTTGATT