Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0446500-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:15121175:15124503:1 gene:Os12g0446500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M24 family protein. (Os12t0446500-00)
Sequence

ATGGCTATTCTTGAAGCACTCCAGCAAACATCGATCCCTGTTACTGGATCTTCTTCTATT
GCAGTCAGTCCAGAAAACTTTATCAAATGTTTGAAGAAGTTTTACCATCATTGGAAGGAA
GATGGATCAAACCTTTGGGGATCTTCAACTGCAATTGCCATTGCTACTCCACCACCTTCT
GATGACATCCGATATAAGAAATCATTAGCCCTGAGCATGTGGTTTTTTAATCGTGAGCTC
CCTGAAACCATAATGGTTTTCACAGAGAAGCAGATTCATGTCCTGTGCAAGCAGAAAGGT
TGTGATGCTCTTAAACCTTTGAAGATGCCTGTTTCAAAAGCAGTCAGCATTGAAATCGTG
TTGCATAATTTGGCAAAGGGTGACAATGGTTCTTCCTTAATGGATGAAATCCTTCATGCT
GTATGTTCCCACTTTGAATCAAAAAGTGCTGTTATTGGGCACTTAGCAAGAGAGAAGCCT
GAAGGTAAGATTCTTGAAGTATGGTCTGAGAAGTTGAACGGATCAAGGCTAAGGCTTTCT
GATGTGTCAAGCGGCATCTCTGATCTTCTTTCTGTGAAAGATGCCACAGAGATTATGTAT
GTTAAAAAGGCTGCATATTTAACTGCATCGGTTATGAAGAAGTATGTAGTTCCAAAGCTG
GAGAAGATTATAGCTGATGAAATGAAGGTACAACATTCAAAACTCACGGATCTGATGGAG
AAGATATTGCTTTCCCCAACAAAGATAGATGTCAAACTGAAAGCAGAAAATGTTGATATA
TGCTACCCACCTATTTTTCAAAGTGGAAGCAAGTATGATCTCCGGCCTGCTGCTGCTAGT
AACAATGATAATCTGTACTATGATTCTGGAAGCCTTATTGTGTGTGCGATGGGTGCAAAG
TACAGTAACTATTGCTCCAATGTTGCAAGGACTTTCCTGATTGATTGTGCTGGGGAAAAA
TGTAATGCATATAAGGTCCTCTGCCAGGCACATGACGCTGCTATTGCTGCTTTGGTACCA
GGTAGCAAGGCTAGTGATGGTTACCAGGCTGCGGTTTCTTTGGTGAGGGATAAAGCTCCT
GATCTTCTCCCCTTTTTTACCAAGTCAGCTGGGACAGGAATTGGCATTGAGTTCCGTGAA
ACTTGGTTGTCTTTGAATGAGAAAAATGACAGGATACTAAAGGAAGGGATGGTTTTTAAT
GTTTCCCTTGGTTTCCAGAATCTCCCAGAGAAGACTGGCGATTACAAGAACAAAGAATTC
TCTCTATTGCTGGCTGACAGTGTTCTTGTTTGCAAGGAAAAGCCACATGTCTTAACAGCT
TTTGTCTCCAAAGCTGATGGTGATGTCTTTTATTCATTTGATGAAGAAAAGACAGGTTCC
CCTTCTGTGAAACCATCGTTGAATGCAAAAGTGATGGTCCCAGAAAAACCAGTGCCAAAA
GCAGAGTTGATGCTGCCGTTGAAAGAAAACCTGCGATCCCACAGCAGGACACCAAAGGAG
GACCTTAGGAAGCAGCTTCAGGCAGAAATTTTACAGAAGAGAACTGCTGAAATTGCAATG
AATAGTAATGCCTCCAATCATAAATTGCTGGAGGGACAAGGCCTTAGAGCTATGCGTGAA
CCTGTTGCATACAAGAGCACAAGGGATATTCCCTGTTCCAATCGGTTGGAGATTCAGGTG
GATAAGCAGAATGAGGCTATCCTATTACCAATATATGGAGTTATTGTCCCCTTCCATGTT
TGTACTGTAAAAAAAGCAGAAATCCGTGGGGATAGCAACAGAGGAGTCTATGTCTGTATT
ACATTTAATGTCCCTGGCACTGCTTCCAATCTCCAAGATCCCTGCCTGAAGACAAATGCA
AATCGCATTTTCTTAAAAGCAGTCACCTTCATTTCAAAAGACAGAAAGCATGCTGACGAG
GCTATTCAATTAATGAGGATTATTCAAAGAGGAGTATTAGAAAGAGCTAAGAGAGCTAGT
TTGGTCAGTCAGGAAAGGCTTCAACTATGTGATAGAATGACTAGGGACAGGATTCAGTTG
ATGGACTTGTGGATACGCCCAACTTTTGCTGGTCGTGGGCGTAAATCCCCTGGAATTTTG
GTGCTCCATGTCAATGGTTTTCAGTATTCCGCATCTAAATCTGAAAAAATTGAAATCATG
TTCTGCAATGTCAAGCATGCGTTCTTCCAGCCAGCTGAGAAGGAGATGATAACTCTCCTC
CACTTCCATCTTTACAATGATATCATGGTGGGCAACAAGAAGACTAGAGATGTGCAGTTC
TACATTGAAGTGATGGATACTGTAGATTCAGTTGGTCTGAGGCGCCGAACAGCATGGGAT
CCTGATGAAATTGAAGAAGAGCAGCGGGAAAGGGCACGGAGGAGCGGAATAAACAGGCAG
TTTGAGCTCTTTGTGAAAAGGGTCAATTCCATTTGGTCTCAGCCAAGGTTTGAGCAGCTC
GGCTTGCAGTTTGAAACTCCATCGCAAAAGCTTGGGTTCAATGGAGTCCACGGCAGAACA
ACATGCTTTATTGTTCCTACTCCAAGTTGCCTGGTTCAACTGGTTGAATCGCCGTTCCTT
GTAACTTCTCTGAGGGAGGTTGACATCGTATGCCTGGAAAGGGTGGCGCTGGGGCAGAAA
TCCTTCGACATGGTTTTCGTGTTCCAAGACCTGAAGCGAGATGTTATCCGCATAGAGGTC
ATTCCAATGACCTCCATTGATGGGATTAAAGATTGGCTCAATGGCTGCAACCTGAAGTAC
TACGAAAGCAAGCTGAACCTCAGTTGGCGTAAGGTCCTGAAGGAGGTTATGAACAATAAA
GAGTCAGACGAGAACAATAGGTGGGAGTTCTTGAACCCAGATGCTAGCGACTCGGACTCG
GAGAGCTCACAGACAGAAGATGATCAGTATGAACCATCAGATGCCGACTCATGCTCTGAA
TCGGATGACGAAGACAGTGACAGTGAATCTGTGGTGGATTCTGGTGAAGACGACGGTGCC
ATGGATGGTTCAGAAGATGATGGTGGTGATGCTGCCGAATCGTGGGATGAGATGGAGCGC
AAGGCGAGGGACGCCGACATGGAGATGGGCAGTGAGTCGGACAGCGAAGACGAGAGGCAG
CGGCGAAGGGAGAAAGCACTGGCCAAGTCTCGGTGTCCTAGTCATCCACAGGCCAAGGGT
GCTGCGCACAAGAGGCAGCGAATTAACTAG

Peptide Sequence

PEP ID

Os12t0446500-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:15121175:15124503:1 gene:Os12g0446500 transcript:Os12t0446500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M24 family protein. (Os12t0446500-00)
Sequence

MAILEALQQTSIPVTGSSSIAVSPENFIKCLKKFYHHWKEDGSNLWGSSTAIAIATPPPS
DDIRYKKSLALSMWFFNRELPETIMVFTEKQIHVLCKQKGCDALKPLKMPVSKAVSIEIV
LHNLAKGDNGSSLMDEILHAVCSHFESKSAVIGHLAREKPEGKILEVWSEKLNGSRLRLS
DVSSGISDLLSVKDATEIMYVKKAAYLTASVMKKYVVPKLEKIIADEMKVQHSKLTDLME
KILLSPTKIDVKLKAENVDICYPPIFQSGSKYDLRPAAASNNDNLYYDSGSLIVCAMGAK
YSNYCSNVARTFLIDCAGEKCNAYKVLCQAHDAAIAALVPGSKASDGYQAAVSLVRDKAP
DLLPFFTKSAGTGIGIEFRETWLSLNEKNDRILKEGMVFNVSLGFQNLPEKTGDYKNKEF
SLLLADSVLVCKEKPHVLTAFVSKADGDVFYSFDEEKTGSPSVKPSLNAKVMVPEKPVPK
AELMLPLKENLRSHSRTPKEDLRKQLQAEILQKRTAEIAMNSNASNHKLLEGQGLRAMRE
PVAYKSTRDIPCSNRLEIQVDKQNEAILLPIYGVIVPFHVCTVKKAEIRGDSNRGVYVCI
TFNVPGTASNLQDPCLKTNANRIFLKAVTFISKDRKHADEAIQLMRIIQRGVLERAKRAS
LVSQERLQLCDRMTRDRIQLMDLWIRPTFAGRGRKSPGILVLHVNGFQYSASKSEKIEIM
FCNVKHAFFQPAEKEMITLLHFHLYNDIMVGNKKTRDVQFYIEVMDTVDSVGLRRRTAWD
PDEIEEEQRERARRSGINRQFELFVKRVNSIWSQPRFEQLGLQFETPSQKLGFNGVHGRT
TCFIVPTPSCLVQLVESPFLVTSLREVDIVCLERVALGQKSFDMVFVFQDLKRDVIRIEV
IPMTSIDGIKDWLNGCNLKYYESKLNLSWRKVLKEVMNNKESDENNRWEFLNPDASDSDS
ESSQTEDDQYEPSDADSCSESDDEDSDSESVVDSGEDDGAMDGSEDDGGDAAESWDEMER
KARDADMEMGSESDSEDERQRRREKALAKSRCPSHPQAKGAAHKRQRIN

Transcript Sequence

Transcript ID

Os12t0446500-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:15121175:15124503:1 gene:Os12g0446500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Peptidase M24 family protein. (Os12t0446500-00)
Sequence

ATGGCTATTCTTGAAGCACTCCAGCAAACATCGATCCCTGTTACTGGATCTTCTTCTATT
GCAGTCAGTCCAGAAAACTTTATCAAATGTTTGAAGAAGTTTTACCATCATTGGAAGGAA
GATGGATCAAACCTTTGGGGATCTTCAACTGCAATTGCCATTGCTACTCCACCACCTTCT
GATGACATCCGATATAAGAAATCATTAGCCCTGAGCATGTGGTTTTTTAATCGTGAGCTC
CCTGAAACCATAATGGTTTTCACAGAGAAGCAGATTCATGTCCTGTGCAAGCAGAAAGGT
TGTGATGCTCTTAAACCTTTGAAGATGCCTGTTTCAAAAGCAGTCAGCATTGAAATCGTG
TTGCATAATTTGGCAAAGGGTGACAATGGTTCTTCCTTAATGGATGAAATCCTTCATGCT
GTATGTTCCCACTTTGAATCAAAAAGTGCTGTTATTGGGCACTTAGCAAGAGAGAAGCCT
GAAGGTAAGATTCTTGAAGTATGGTCTGAGAAGTTGAACGGATCAAGGCTAAGGCTTTCT
GATGTGTCAAGCGGCATCTCTGATCTTCTTTCTGTGAAAGATGCCACAGAGATTATGTAT
GTTAAAAAGGCTGCATATTTAACTGCATCGGTTATGAAGAAGTATGTAGTTCCAAAGCTG
GAGAAGATTATAGCTGATGAAATGAAGGTACAACATTCAAAACTCACGGATCTGATGGAG
AAGATATTGCTTTCCCCAACAAAGATAGATGTCAAACTGAAAGCAGAAAATGTTGATATA
TGCTACCCACCTATTTTTCAAAGTGGAAGCAAGTATGATCTCCGGCCTGCTGCTGCTAGT
AACAATGATAATCTGTACTATGATTCTGGAAGCCTTATTGTGTGTGCGATGGGTGCAAAG
TACAGTAACTATTGCTCCAATGTTGCAAGGACTTTCCTGATTGATTGTGCTGGGGAAAAA
TGTAATGCATATAAGGTCCTCTGCCAGGCACATGACGCTGCTATTGCTGCTTTGGTACCA
GGTAGCAAGGCTAGTGATGGTTACCAGGCTGCGGTTTCTTTGGTGAGGGATAAAGCTCCT
GATCTTCTCCCCTTTTTTACCAAGTCAGCTGGGACAGGAATTGGCATTGAGTTCCGTGAA
ACTTGGTTGTCTTTGAATGAGAAAAATGACAGGATACTAAAGGAAGGGATGGTTTTTAAT
GTTTCCCTTGGTTTCCAGAATCTCCCAGAGAAGACTGGCGATTACAAGAACAAAGAATTC
TCTCTATTGCTGGCTGACAGTGTTCTTGTTTGCAAGGAAAAGCCACATGTCTTAACAGCT
TTTGTCTCCAAAGCTGATGGTGATGTCTTTTATTCATTTGATGAAGAAAAGACAGGTTCC
CCTTCTGTGAAACCATCGTTGAATGCAAAAGTGATGGTCCCAGAAAAACCAGTGCCAAAA
GCAGAGTTGATGCTGCCGTTGAAAGAAAACCTGCGATCCCACAGCAGGACACCAAAGGAG
GACCTTAGGAAGCAGCTTCAGGCAGAAATTTTACAGAAGAGAACTGCTGAAATTGCAATG
AATAGTAATGCCTCCAATCATAAATTGCTGGAGGGACAAGGCCTTAGAGCTATGCGTGAA
CCTGTTGCATACAAGAGCACAAGGGATATTCCCTGTTCCAATCGGTTGGAGATTCAGGTG
GATAAGCAGAATGAGGCTATCCTATTACCAATATATGGAGTTATTGTCCCCTTCCATGTT
TGTACTGTAAAAAAAGCAGAAATCCGTGGGGATAGCAACAGAGGAGTCTATGTCTGTATT
ACATTTAATGTCCCTGGCACTGCTTCCAATCTCCAAGATCCCTGCCTGAAGACAAATGCA
AATCGCATTTTCTTAAAAGCAGTCACCTTCATTTCAAAAGACAGAAAGCATGCTGACGAG
GCTATTCAATTAATGAGGATTATTCAAAGAGGAGTATTAGAAAGAGCTAAGAGAGCTAGT
TTGGTCAGTCAGGAAAGGCTTCAACTATGTGATAGAATGACTAGGGACAGGATTCAGTTG
ATGGACTTGTGGATACGCCCAACTTTTGCTGGTCGTGGGCGTAAATCCCCTGGAATTTTG
GTGCTCCATGTCAATGGTTTTCAGTATTCCGCATCTAAATCTGAAAAAATTGAAATCATG
TTCTGCAATGTCAAGCATGCGTTCTTCCAGCCAGCTGAGAAGGAGATGATAACTCTCCTC
CACTTCCATCTTTACAATGATATCATGGTGGGCAACAAGAAGACTAGAGATGTGCAGTTC
TACATTGAAGTGATGGATACTGTAGATTCAGTTGGTCTGAGGCGCCGAACAGCATGGGAT
CCTGATGAAATTGAAGAAGAGCAGCGGGAAAGGGCACGGAGGAGCGGAATAAACAGGCAG
TTTGAGCTCTTTGTGAAAAGGGTCAATTCCATTTGGTCTCAGCCAAGGTTTGAGCAGCTC
GGCTTGCAGTTTGAAACTCCATCGCAAAAGCTTGGGTTCAATGGAGTCCACGGCAGAACA
ACATGCTTTATTGTTCCTACTCCAAGTTGCCTGGTTCAACTGGTTGAATCGCCGTTCCTT
GTAACTTCTCTGAGGGAGGTTGACATCGTATGCCTGGAAAGGGTGGCGCTGGGGCAGAAA
TCCTTCGACATGGTTTTCGTGTTCCAAGACCTGAAGCGAGATGTTATCCGCATAGAGGTC
ATTCCAATGACCTCCATTGATGGGATTAAAGATTGGCTCAATGGCTGCAACCTGAAGTAC
TACGAAAGCAAGCTGAACCTCAGTTGGCGTAAGGTCCTGAAGGAGGTTATGAACAATAAA
GAGTCAGACGAGAACAATAGGTGGGAGTTCTTGAACCCAGATGCTAGCGACTCGGACTCG
GAGAGCTCACAGACAGAAGATGATCAGTATGAACCATCAGATGCCGACTCATGCTCTGAA
TCGGATGACGAAGACAGTGACAGTGAATCTGTGGTGGATTCTGGTGAAGACGACGGTGCC
ATGGATGGTTCAGAAGATGATGGTGGTGATGCTGCCGAATCGTGGGATGAGATGGAGCGC
AAGGCGAGGGACGCCGACATGGAGATGGGCAGTGAGTCGGACAGCGAAGACGAGAGGCAG
CGGCGAAGGGAGAAAGCACTGGCCAAGTCTCGGTGTCCTAGTCATCCACAGGCCAAGGGT
GCTGCGCACAAGAGGCAGCGAATTAACTAGTTCTCAGATAATGGAAGTTTAGCTTGTTCT
TGTGGCACTTTATTATGCATCTGTCGCTTTTTACCTGTCGTTAGTTTCGGTGGTGAACTT
TTGATATGTTCTTCTAGGTACTTTGCATA